RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 ZNF513Q8N8E2 541 aaPredicted RBP11.9□□□□□ -0.51
DDR1-240ENST00000454612 POLR3CQ9BUI4 534 aaPredicted RBP11.9□□□□□ -0.51
DDR1-240ENST00000454612 FAM49AQ9H0Q0 323 aaPredicted RBP11.9□□□□□ -0.51
DDR1-240ENST00000454612 AGO2Q9UKV8 859 aaKnown RBP11.9□□□□□ -0.51
DDR1-240ENST00000454612 TRAF3IP3Q9Y228 551 aa11.9□□□□□ -0.51
DDR1-240ENST00000454612 RIPK3Q9Y572 518 aa11.9□□□□□ -0.51
DDR1-240ENST00000454612 MAD1L1Q9Y6D9 718 aa11.9□□□□□ -0.51
DDR1-240ENST00000454612 TCP11X1B4DZS4 312 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 CYP3A4P08684 503 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 RALAP11233 206 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 YWHAGP61981 247 aaKnown RBP eCLIP11.89□□□□□ -0.51
DDR1-240ENST00000454612 CDK17Q00537 523 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 CNTN2Q02246 1040 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 ZCWPW2Q504Y3 356 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 PPP6R3Q5H9R7 873 aaPredicted RBP11.89□□□□□ -0.51
DDR1-240ENST00000454612 TAOK1Q7L7X3 1001 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 RNF169Q8NCN4 708 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 MYCBPAPQ8TBZ2 947 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 OTUD5Q96G74 571 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 INPP4AQ96PE3 977 aaPredicted RBP11.89□□□□□ -0.51
DDR1-240ENST00000454612 IWS1Q96ST2 819 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 KIF9Q9HAQ2 790 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 KLC4Q9NSK0 619 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 SUGT1Q9Y2Z0 365 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 HEY1Q9Y5J3 304 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 EXOC1LA0A1B0GW35 172 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 CCDC160A6NGH7 325 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 PGK2P07205 417 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 ADRB2P07550 413 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 SNHG28P0DPA3 235 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 SAT1P21673 171 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 HOXD13P35453 343 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 ATP11AP98196 1134 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 PRKCEQ02156 737 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 GPS1Q13098 491 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 PTGISQ16647 500 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 DNAJC24Q6P3W2 148 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.89□□□□□ -0.51
DDR1-240ENST00000454612 SYTL5Q8TDW5 730 aaPredicted RBP11.89□□□□□ -0.51
DDR1-240ENST00000454612 TRAPPC12Q8WVT3 735 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 RAPGEF5Q92565 580 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 HSD17B14Q9BPX1 270 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 E2F8A0AVK6 867 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 H7C0C1 242 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 TBX3O15119 743 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 ZSCAN5DPP0CG00 497 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 CA4P22748 312 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 ATP5OP48047 213 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 ZNF844Q08AG5 666 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 RNF149Q8NC42 400 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 NLGN2Q8NFZ4 835 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 EPN3Q9H201 632 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 SUDS3Q9H7L9 328 aaPredicted RBP11.89□□□□□ -0.51
DDR1-240ENST00000454612 NGRNQ9NPE2 291 aaKnown RBP11.89□□□□□ -0.51
DDR1-240ENST00000454612 HOMER3Q9NSC5 361 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 FGFR1OP2Q9NVK5 253 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 FBXO40Q9UH90 709 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 AKT3Q9Y243 479 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 STK24Q9Y6E0 443 aa11.89□□□□□ -0.51
DDR1-240ENST00000454612 RASA4BC9J798 803 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 RASA4O43374 803 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 ENTPD3O75355 529 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 HLA-DRAP01903 254 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 GJB1P08034 283 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 CCND2P30279 289 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 RFX6Q8HWS3 928 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 PAF1Q8N7H5 531 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 ATP8B4Q8TF62 1192 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 MYOZ2Q9NPC6 264 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 PCNTO95613 3336 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 PSAPP07602 524 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 YARSP54577 528 aaKnown RBP11.88□□□□□ -0.51
DDR1-240ENST00000454612 SWT1Q5T5J6 900 aaKnown RBP11.88□□□□□ -0.51
DDR1-240ENST00000454612 WNK4Q96J92 1243 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 FHDC1Q9C0D6 1143 aaPredicted RBP11.88□□□□□ -0.51
DDR1-240ENST00000454612 CHST7Q9NS84 486 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 GINM1Q9NU53 330 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 SEPT10Q9P0V9 454 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 TELO2Q9Y4R8 837 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 C10orf71Q711Q0 1435 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 PSMD10O75832 226 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 CPP00450 1065 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 TMEM253P0C7T8 217 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 CYP11B1P15538 503 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 RPL21P46778 160 aaKnown RBP11.88□□□□□ -0.51
DDR1-240ENST00000454612 RGS7P49802 495 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 GMPSP49915 693 aaPredicted RBP11.88□□□□□ -0.51
DDR1-240ENST00000454612 NOP14P78316 857 aaKnown RBP11.88□□□□□ -0.51
DDR1-240ENST00000454612 ITGB3BPQ13352 177 aaPredicted RBP11.88□□□□□ -0.51
DDR1-240ENST00000454612 WDR72Q3MJ13 1102 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 EMC1Q8N766 993 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 VAV3Q9UKW4 847 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 ZNRF3Q9ULT6 936 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 TBX20Q9UMR3 447 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 COG5Q9UP83 839 aa11.88□□□□□ -0.51
DDR1-240ENST00000454612 MEFVO15553 781 aaPredicted RBP11.87□□□□□ -0.51
DDR1-240ENST00000454612 RTN2O75298 545 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 MYBL1P10243 752 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 Q4G0T1 1027 aa11.87□□□□□ -0.51
DDR1-240ENST00000454612 FAXCQ5TGI0 409 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms