RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 TRPV2Q9Y5S1 764 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 LRRK1Q38SD2 2015 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 A0A0U1RQF3 1178 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 RCCD1A6NED2 376 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 B4DLN1 442 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 KCNJ18B7U540 433 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 USO1O60763 962 aaKnown RBP5.41□□□□□ -1.54
RIF1-207ENST00000454583 TUBB4AP04350 444 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 ZSCAN20P17040 1043 aaPredicted RBP5.41□□□□□ -1.54
RIF1-207ENST00000454583 PHKA2P46019 1235 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 EFNA5P52803 228 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 HADHBP55084 474 aaKnown RBP5.41□□□□□ -1.54
RIF1-207ENST00000454583 PPFIA1Q13136 1202 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 CBLBQ13191 982 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 CAMK1Q14012 370 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 KCNJ12Q14500 433 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 UPP1Q16831 310 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 ARHGEF19Q8IW93 802 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 COLGALT2Q8IYK4 626 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 FAM71AQ8IYT1 594 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 SHC3Q92529 594 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 CNOT6LQ96LI5 555 aaKnown RBP5.41□□□□□ -1.54
RIF1-207ENST00000454583 CGRRF1Q99675 332 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 EDEM3Q9BZQ6 932 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 PLEKHA5Q9HAU0 1116 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 PKD2L1Q9P0L9 805 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 MRFAP1Q9Y605 127 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 NRG2O14511 850 aaPredicted RBP5.4□□□□□ -1.54
RIF1-207ENST00000454583 PPEF2O14830 753 aa5.4□□□□□ -1.54
RIF1-207ENST00000454583 ASS1P00966 412 aaKnown RBP5.4□□□□□ -1.54
RIF1-207ENST00000454583 CYP1A1P04798 512 aaPredicted RBP5.4□□□□□ -1.54
RIF1-207ENST00000454583 UNGP13051 313 aaPredicted RBP5.4□□□□□ -1.54
RIF1-207ENST00000454583 SFPQP23246 707 aaKnown RBP eCLIP5.4□□□□□ -1.54
RIF1-207ENST00000454583 PEX3P56589 373 aa5.4□□□□□ -1.54
RIF1-207ENST00000454583 DHX8Q14562 1220 aaKnown RBP5.4□□□□□ -1.54
RIF1-207ENST00000454583 MTF1Q14872 753 aa5.4□□□□□ -1.54
RIF1-207ENST00000454583 MTERF2Q49AM1 385 aa5.4□□□□□ -1.54
RIF1-207ENST00000454583 KLHDC7AQ5VTJ3 777 aa5.4□□□□□ -1.54
RIF1-207ENST00000454583 OTUD1Q5VV17 481 aaPredicted RBP5.4□□□□□ -1.54
RIF1-207ENST00000454583 ADAM33Q9BZ11 813 aa5.4□□□□□ -1.54
RIF1-207ENST00000454583 HMX1Q9NP08 348 aaPredicted RBP5.4□□□□□ -1.54
RIF1-207ENST00000454583 CYTH4Q9UIA0 394 aa5.4□□□□□ -1.54
RIF1-207ENST00000454583 C2CD2Q9Y426 696 aa5.4□□□□□ -1.54
RIF1-207ENST00000454583 FAM92AA1XBS5 289 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 DENND3A2RUS2 1198 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 C10orf142B7Z368 130 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 GFRA2O00451 464 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 DGKIO75912 1065 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 RARBP10826 455 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 RFC2P35250 354 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 FMO5P49326 533 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 FKBP3Q00688 224 aaKnown RBP5.4□□□□□ -1.55
RIF1-207ENST00000454583 AMPD3Q01432 767 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 XKR9Q5GH70 373 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 WDR49Q8IV35 697 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 CCDC65Q8IXS2 484 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 PCSK9Q8NBP7 692 aaKnown RBP5.4□□□□□ -1.55
RIF1-207ENST00000454583 DNAJB3Q8WWF6 145 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 DDX27Q96GQ7 796 aaKnown RBP5.4□□□□□ -1.55
RIF1-207ENST00000454583 FAM84AQ96KN4 292 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 ACCSQ96QU6 501 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 ABCB6Q9NP58 842 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 NRBP2Q9NSY0 501 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 WDR70Q9NW82 654 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 CDY2AQ9Y6F7 541 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 BIN1O00499 593 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 SORBS3O60504 671 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 MTA2O94776 668 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 TIMP1P01033 207 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 ATP2B1P20020 1258 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 BMP8BP34820 402 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 GABRB2P47870 512 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 CDC42EP1Q00587 391 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 GOLGA8FQ08AF8 430 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 GOLGA8DPQ0D2H9 430 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 SNRNP35Q16560 246 aaKnown RBP5.4□□□□□ -1.55
RIF1-207ENST00000454583 NT5DC4Q86YG4 428 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 CCDC112Q8NEF3 446 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 LNX1Q8TBB1 728 aaPredicted RBP5.4□□□□□ -1.55
RIF1-207ENST00000454583 FAM71BQ8TC56 605 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 KCNV2Q8TDN2 545 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 PRMT7Q9NVM4 692 aaPredicted RBP5.4□□□□□ -1.55
RIF1-207ENST00000454583 ARHGAP20Q9P2F6 1191 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 STXBP5LQ9Y2K9 1186 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 IPPQ9Y573 584 aa5.4□□□□□ -1.55
RIF1-207ENST00000454583 ARHGAP6O43182 974 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 ZC3H11AO75152 810 aaKnown RBP eCLIP5.39□□□□□ -1.555e-6■□□□□ 8.5
RIF1-207ENST00000454583 TADA3O75528 432 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 SKILP12757 684 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 HOXD10P28358 340 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 PTGISQ16647 500 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 MAN2A1Q16706 1144 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 RAB41Q5JT25 222 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 FAM171BQ6P995 826 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 GPD1LQ8N335 351 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 USP38Q8NB14 1042 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 WDR24Q96S15 920 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 MPHOSPH6Q99547 160 aaKnown RBP5.39□□□□□ -1.55
RIF1-207ENST00000454583 C2orf40Q9H1Z8 148 aa5.39□□□□□ -1.55
RIF1-207ENST00000454583 MLXIPQ9HAP2 919 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms