RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 SPRED2Q7Z698 418 aa15.86■□□□□ 0.13
NCKIPSD-207ENST00000453349 BRSK2Q8IWQ3 736 aa15.86■□□□□ 0.13
NCKIPSD-207ENST00000453349 KLHL23Q8NBE8 558 aa15.86■□□□□ 0.13
NCKIPSD-207ENST00000453349 CACTINQ8WUQ7 758 aaKnown RBP15.86■□□□□ 0.13
NCKIPSD-207ENST00000453349 DDX27Q96GQ7 796 aaKnown RBP15.86■□□□□ 0.13
NCKIPSD-207ENST00000453349 FBXL18Q96ME1 805 aa15.86■□□□□ 0.13
NCKIPSD-207ENST00000453349 ZMAT2Q96NC0 199 aaKnown RBP15.86■□□□□ 0.13
NCKIPSD-207ENST00000453349 PUF60Q9UHX1 559 aaKnown RBP15.86■□□□□ 0.13
NCKIPSD-207ENST00000453349 DACH1Q9UI36 760 aa15.86■□□□□ 0.13
NCKIPSD-207ENST00000453349 UBQLN1Q9UMX0 589 aaKnown RBP15.86■□□□□ 0.13
NCKIPSD-207ENST00000453349 CASTOR2A6NHX0 329 aa15.85■□□□□ 0.13
NCKIPSD-207ENST00000453349 CETN3O15182 167 aa15.85■□□□□ 0.13
NCKIPSD-207ENST00000453349 MEFVO15553 781 aaPredicted RBP15.85■□□□□ 0.13
NCKIPSD-207ENST00000453349 FGF18O76093 207 aa15.85■□□□□ 0.13
NCKIPSD-207ENST00000453349 NR2F2P24468 414 aa15.85■□□□□ 0.13
NCKIPSD-207ENST00000453349 PBX3P40426 434 aa15.85■□□□□ 0.13
NCKIPSD-207ENST00000453349 LRRC63Q05C16 580 aa15.85■□□□□ 0.13
NCKIPSD-207ENST00000453349 TMEM132DQ14C87 1099 aa15.85■□□□□ 0.13
NCKIPSD-207ENST00000453349 NAB2Q15742 525 aa15.85■□□□□ 0.13
NCKIPSD-207ENST00000453349 KLHL40Q2TBA0 621 aa15.85■□□□□ 0.13
NCKIPSD-207ENST00000453349 CAVIN1Q6NZI2 390 aaKnown RBP15.85■□□□□ 0.13
NCKIPSD-207ENST00000453349 NT5DC4Q86YG4 428 aa15.85■□□□□ 0.13
NCKIPSD-207ENST00000453349 CBWD2Q8IUF1 395 aa15.85■□□□□ 0.13
NCKIPSD-207ENST00000453349 SLC39A11Q8N1S5 342 aa15.85■□□□□ 0.13
NCKIPSD-207ENST00000453349 BEST2Q8NFU1 509 aa15.85■□□□□ 0.13
NCKIPSD-207ENST00000453349 NELFBQ8WX92 580 aa15.85■□□□□ 0.13
NCKIPSD-207ENST00000453349 TMEM169Q96HH4 297 aa15.85■□□□□ 0.13
NCKIPSD-207ENST00000453349 PRDM12Q9H4Q4 367 aa15.85■□□□□ 0.13
NCKIPSD-207ENST00000453349 RALGAPA2Q2PPJ7 1873 aa15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 TDRD15B5MCY1 1934 aaKnown RBP15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 RFXAPO00287 272 aa15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 TADA2AO75478 443 aa15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 LETM1O95202 739 aaPredicted RBP15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 CYP3A5P20815 502 aa15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 RPL9P32969 192 aaKnown RBP15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 PSMC2P35998 433 aaKnown RBP15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 FKBP3Q00688 224 aaKnown RBP15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 PLCB3Q01970 1234 aa15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 PAK1Q13153 545 aa15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 ZBTB6Q15916 424 aa15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 ZCWPW2Q504Y3 356 aa15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 DCLRE1AQ6PJP8 1040 aa15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 RBM43Q6ZSC3 357 aaKnown RBP15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 Q7L0L9 218 aa15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 C18orf25Q96B23 403 aaPredicted RBP15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 IGSF21Q96ID5 467 aa15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 MFSD14AQ96MC6 490 aa15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 FNBP1Q96RU3 617 aa15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 GAS2L1Q99501 681 aaPredicted RBP15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 PDE11AQ9HCR9 933 aa15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 ALG13Q9NP73 1137 aaKnown RBP15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 TMEM63CQ9P1W3 806 aa15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 STK39Q9UEW8 545 aa15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 CTNND2Q9UQB3 1225 aa15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 PRG3Q9Y2Y8 225 aaPredicted RBP15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 C2CD2Q9Y426 696 aa15.84■□□□□ 0.13
NCKIPSD-207ENST00000453349 B4GALT3O60512 393 aa15.83■□□□□ 0.12
NCKIPSD-207ENST00000453349 ITGB1P05556 798 aa15.83■□□□□ 0.12
NCKIPSD-207ENST00000453349 CLCNKBP51801 687 aa15.83■□□□□ 0.12
NCKIPSD-207ENST00000453349 UBE3AQ05086 875 aa15.83■□□□□ 0.12
NCKIPSD-207ENST00000453349 CYP24A1Q07973 514 aa15.83■□□□□ 0.12
NCKIPSD-207ENST00000453349 BMS1Q14692 1282 aaKnown RBP15.83■□□□□ 0.12
NCKIPSD-207ENST00000453349 PSMD6Q15008 389 aa15.83■□□□□ 0.12
NCKIPSD-207ENST00000453349 PTPROQ16827 1216 aa15.83■□□□□ 0.12
NCKIPSD-207ENST00000453349 SPATA1Q5VX52 437 aa15.83■□□□□ 0.12
NCKIPSD-207ENST00000453349 USP37Q86T82 979 aa15.83■□□□□ 0.12
NCKIPSD-207ENST00000453349 SPPL3Q8TCT6 385 aa15.83■□□□□ 0.12
NCKIPSD-207ENST00000453349 LMAN2LQ9H0V9 348 aa15.83■□□□□ 0.12
NCKIPSD-207ENST00000453349 GOLGA2P5Q9HBQ8 144 aa15.83■□□□□ 0.12
NCKIPSD-207ENST00000453349 LZTS1Q9Y250 596 aa15.83■□□□□ 0.12
NCKIPSD-207ENST00000453349 CEP290O15078 2479 aa15.83■□□□□ 0.12
NCKIPSD-207ENST00000453349 NLRC5Q86WI3 1866 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 TRIM49BA6NDI0 452 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 EPOPA6NHQ4 379 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 PODXLO00592 558 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 MAPK13O15264 365 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 FGFR1OPO95684 399 aaKnown RBP15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 NFICP08651 508 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 TMEM191BP0C7N4 346 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 KRT13P13646 458 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 TNNI1P19237 187 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 CASP4P49662 377 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 PMS1P54277 932 aaKnown RBP15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 STX17P56962 302 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 TFAMQ00059 246 aaKnown RBP15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 SOX4Q06945 474 aaPredicted RBP15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 UPP1Q16831 310 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 CT47A1Q5JQC4 288 aaPredicted RBP15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 FOXR2Q6PJQ5 311 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 DDX53Q86TM3 631 aaKnown RBP15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 MICAL1Q8TDZ2 1067 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 GDPD5Q8WTR4 605 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 POF1BQ8WVV4 589 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 RABGGTAQ92696 567 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 CCDC127Q96BQ5 260 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 ANKRD36BP1Q96IX9 119 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 MTMR10Q9NXD2 777 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 DPP3Q9NY33 737 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 LMCD1Q9NZU5 365 aa15.82■□□□□ 0.12
NCKIPSD-207ENST00000453349 RWDD2AQ9UIY3 292 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms