RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 EFNA5P52803 228 aa15.76■□□□□ 0.11
LYSMD3-202ENST00000453259 SLC8B1Q6J4K2 584 aa15.76■□□□□ 0.11
LYSMD3-202ENST00000453259 C1orf228Q6PIY5 440 aa15.76■□□□□ 0.11
LYSMD3-202ENST00000453259 CDR2LQ86X02 465 aaPredicted RBP15.76■□□□□ 0.11
LYSMD3-202ENST00000453259 HASPINQ8TF76 798 aa15.76■□□□□ 0.11
LYSMD3-202ENST00000453259 RABGGTAQ92696 567 aa15.76■□□□□ 0.11
LYSMD3-202ENST00000453259 TNFRSF25Q93038 417 aa15.76■□□□□ 0.11
LYSMD3-202ENST00000453259 NACC1Q96RE7 527 aa15.76■□□□□ 0.11
LYSMD3-202ENST00000453259 KXD1Q9BQD3 176 aa15.76■□□□□ 0.11
LYSMD3-202ENST00000453259 DNMT3BQ9UBC3 853 aaKnown RBP15.76■□□□□ 0.11
LYSMD3-202ENST00000453259 GMEB2Q9UKD1 530 aa15.76■□□□□ 0.11
LYSMD3-202ENST00000453259 MAFFQ9ULX9 164 aa15.76■□□□□ 0.11
LYSMD3-202ENST00000453259 PHLPP2Q6ZVD8 1323 aa15.75■□□□□ 0.11
LYSMD3-202ENST00000453259 ZNF197O14709 1029 aa15.75■□□□□ 0.11
LYSMD3-202ENST00000453259 FOXD2O60548 495 aaPredicted RBP15.75■□□□□ 0.11
LYSMD3-202ENST00000453259 B3GAT3O94766 335 aa15.75■□□□□ 0.11
LYSMD3-202ENST00000453259 RHOP08100 348 aa15.75■□□□□ 0.11
LYSMD3-202ENST00000453259 PTPN2P17706 415 aa15.75■□□□□ 0.11
LYSMD3-202ENST00000453259 ATP2B1P20020 1258 aa15.75■□□□□ 0.11
LYSMD3-202ENST00000453259 MUTP22033 750 aa15.75■□□□□ 0.11
LYSMD3-202ENST00000453259 ANKRD1Q15327 319 aa15.75■□□□□ 0.11
LYSMD3-202ENST00000453259 TMEM132AQ24JP5 1023 aa15.75■□□□□ 0.11
LYSMD3-202ENST00000453259 ZNF461Q8TAF7 563 aa15.75■□□□□ 0.11
LYSMD3-202ENST00000453259 PIGOQ8TEQ8 1089 aa15.75■□□□□ 0.11
LYSMD3-202ENST00000453259 DDX27Q96GQ7 796 aaKnown RBP15.75■□□□□ 0.11
LYSMD3-202ENST00000453259 MTMR9Q96QG7 549 aa15.75■□□□□ 0.11
LYSMD3-202ENST00000453259 CCDC113Q9H0I3 377 aa15.75■□□□□ 0.11
LYSMD3-202ENST00000453259 SNTG2Q9NY99 539 aa15.75■□□□□ 0.11
LYSMD3-202ENST00000453259 MTF2Q9Y483 593 aaPredicted RBP15.75■□□□□ 0.11
LYSMD3-202ENST00000453259 CDY1Q9Y6F8 540 aa15.75■□□□□ 0.11
LYSMD3-202ENST00000453259 EPG5Q9HCE0 2579 aa15.75■□□□□ 0.11
LYSMD3-202ENST00000453259 ADAM12O43184 909 aa15.74■□□□□ 0.11
LYSMD3-202ENST00000453259 LRG1P02750 347 aa15.74■□□□□ 0.11
LYSMD3-202ENST00000453259 PRKCBP05771 671 aa15.74■□□□□ 0.11
LYSMD3-202ENST00000453259 TARSP26639 723 aaKnown RBP15.74■□□□□ 0.11
LYSMD3-202ENST00000453259 MLLT6P55198 1093 aaPredicted RBP15.74■□□□□ 0.11
LYSMD3-202ENST00000453259 ORC2Q13416 577 aaPredicted RBP15.74■□□□□ 0.11
LYSMD3-202ENST00000453259 UPP1Q16831 310 aa15.74■□□□□ 0.11
LYSMD3-202ENST00000453259 EARS2Q5JPH6 523 aaKnown RBP15.74■□□□□ 0.11
LYSMD3-202ENST00000453259 SKAP1Q86WV1 359 aa15.74■□□□□ 0.11
LYSMD3-202ENST00000453259 CELF5Q8N6W0 485 aaKnown RBP15.74■□□□□ 0.11
LYSMD3-202ENST00000453259 LEMD2Q8NC56 503 aa15.74■□□□□ 0.11
LYSMD3-202ENST00000453259 ERMNQ8TAM6 284 aa15.74■□□□□ 0.11
LYSMD3-202ENST00000453259 IRF7Q92985 503 aa15.74■□□□□ 0.11
LYSMD3-202ENST00000453259 MSANTD3Q96H12 275 aa15.74■□□□□ 0.11
LYSMD3-202ENST00000453259 PPP1R10Q96QC0 940 aaKnown RBP15.74■□□□□ 0.11
LYSMD3-202ENST00000453259 POLR3CQ9BUI4 534 aaPredicted RBP15.74■□□□□ 0.11
LYSMD3-202ENST00000453259 CHRDQ9H2X0 955 aa15.74■□□□□ 0.11
LYSMD3-202ENST00000453259 TOPORSQ9NS56 1045 aaPredicted RBP15.74■□□□□ 0.11
LYSMD3-202ENST00000453259 SLC38A7Q9NVC3 462 aa15.74■□□□□ 0.11
LYSMD3-202ENST00000453259 ORC3Q9UBD5 711 aaPredicted RBP15.74■□□□□ 0.11
LYSMD3-202ENST00000453259 RAB23Q9ULC3 237 aa15.74■□□□□ 0.11
LYSMD3-202ENST00000453259 CACNA1BQ00975 2339 aa15.73■□□□□ 0.11
LYSMD3-202ENST00000453259 VWA8A3KMH1 1905 aa15.73■□□□□ 0.11
LYSMD3-202ENST00000453259 SYN3O14994 580 aa15.73■□□□□ 0.11
LYSMD3-202ENST00000453259 ABLIM3O94929 683 aa15.73■□□□□ 0.11
LYSMD3-202ENST00000453259 SPATA31C1P0DKV0 1188 aa15.73■□□□□ 0.11
LYSMD3-202ENST00000453259 ELF1P32519 619 aa15.73■□□□□ 0.11
LYSMD3-202ENST00000453259 TXKP42681 527 aa15.73■□□□□ 0.11
LYSMD3-202ENST00000453259 CCR3P51677 355 aa15.73■□□□□ 0.11
LYSMD3-202ENST00000453259 ATXN1P54253 815 aaKnown RBP15.73■□□□□ 0.11
LYSMD3-202ENST00000453259 NR5A1Q13285 461 aa15.73■□□□□ 0.11
LYSMD3-202ENST00000453259 TPGS2Q68CL5 300 aa15.73■□□□□ 0.11
LYSMD3-202ENST00000453259 LAIR1Q6GTX8 287 aa15.73■□□□□ 0.11
LYSMD3-202ENST00000453259 TCEAL8Q8IYN2 117 aa15.73■□□□□ 0.11
LYSMD3-202ENST00000453259 DEPTORQ8TB45 409 aa15.73■□□□□ 0.11
LYSMD3-202ENST00000453259 ZFP14Q9HCL3 533 aa15.73■□□□□ 0.11
LYSMD3-202ENST00000453259 GPRC5CQ9NQ84 441 aa15.73■□□□□ 0.11
LYSMD3-202ENST00000453259 HCFC1R1Q9NWW0 138 aa15.73■□□□□ 0.11
LYSMD3-202ENST00000453259 CACNG4Q9UBN1 327 aa15.73■□□□□ 0.11
LYSMD3-202ENST00000453259 DOCK6Q96HP0 2047 aa15.72■□□□□ 0.11
LYSMD3-202ENST00000453259 H7C4K7 107 aa15.72■□□□□ 0.11
LYSMD3-202ENST00000453259 ATF2P15336 505 aa15.72■□□□□ 0.11
LYSMD3-202ENST00000453259 CYP11B2P19099 503 aa15.72■□□□□ 0.11
LYSMD3-202ENST00000453259 MTAPQ13126 283 aa15.72■□□□□ 0.11
LYSMD3-202ENST00000453259 FZD5Q13467 585 aa15.72■□□□□ 0.11
LYSMD3-202ENST00000453259 CATSPER3Q86XQ3 398 aa15.72■□□□□ 0.11
LYSMD3-202ENST00000453259 NOSTRINQ8IVI9 506 aa15.72■□□□□ 0.11
LYSMD3-202ENST00000453259 ZNF687Q8N1G0 1237 aa15.72■□□□□ 0.11
LYSMD3-202ENST00000453259 DEPDC1BQ8WUY9 529 aa15.72■□□□□ 0.11
LYSMD3-202ENST00000453259 KIFAP3Q92845 792 aa15.72■□□□□ 0.11
LYSMD3-202ENST00000453259 E2F7Q96AV8 911 aa15.72■□□□□ 0.11
LYSMD3-202ENST00000453259 IFT74Q96LB3 600 aa15.72■□□□□ 0.11
LYSMD3-202ENST00000453259 TRMT61BQ9BVS5 477 aaKnown RBP15.72■□□□□ 0.11
LYSMD3-202ENST00000453259 BRD9Q9H8M2 597 aa15.72■□□□□ 0.11
LYSMD3-202ENST00000453259 HEBP1Q9NRV9 189 aa15.72■□□□□ 0.11
LYSMD3-202ENST00000453259 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.72■□□□□ 0.11
LYSMD3-202ENST00000453259 NOTCH4Q99466 2003 aa15.72■□□□□ 0.11
LYSMD3-202ENST00000453259 FAM205CA6NFA0 338 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 PRRG1O14668 218 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 TDGF1P13385 188 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 CD72P21854 359 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 RPA1P27694 616 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 CNR2P34972 360 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 CLCNKBP51801 687 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 YARSP54577 528 aaKnown RBP15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 ROR1Q01973 937 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 TRIM29Q14134 588 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 SLC5A9Q2M3M2 681 aa15.71■□□□□ 0.11
LYSMD3-202ENST00000453259 XKR4Q5GH76 650 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms