RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 EDN1P05305 212 aa12.86□□□□□ -0.35
HERC3-207ENST00000452979 CYP11B2P19099 503 aa12.86□□□□□ -0.35
HERC3-207ENST00000452979 IGFBP6P24592 240 aaPredicted RBP12.86□□□□□ -0.35
HERC3-207ENST00000452979 NAMPTP43490 491 aa12.86□□□□□ -0.35
HERC3-207ENST00000452979 FZD5Q13467 585 aa12.86□□□□□ -0.35
HERC3-207ENST00000452979 ANKRD1Q15327 319 aa12.86□□□□□ -0.35
HERC3-207ENST00000452979 UPP1Q16831 310 aa12.86□□□□□ -0.35
HERC3-207ENST00000452979 PABPC1LQ4VXU2 614 aaKnown RBP12.86□□□□□ -0.35
HERC3-207ENST00000452979 VARS2Q5ST30 1063 aaKnown RBP12.86□□□□□ -0.35
HERC3-207ENST00000452979 ZBTB41Q5SVQ8 909 aa12.86□□□□□ -0.35
HERC3-207ENST00000452979 GPR161Q8N6U8 529 aaKnown RBP12.86□□□□□ -0.35
HERC3-207ENST00000452979 BSNDQ8WZ55 320 aa12.86□□□□□ -0.35
HERC3-207ENST00000452979 UROC1Q96N76 676 aa12.86□□□□□ -0.35
HERC3-207ENST00000452979 PPP1R10Q96QC0 940 aaKnown RBP12.86□□□□□ -0.35
HERC3-207ENST00000452979 HINFPQ9BQA5 517 aa12.86□□□□□ -0.35
HERC3-207ENST00000452979 KXD1Q9BQD3 176 aa12.86□□□□□ -0.35
HERC3-207ENST00000452979 ADPGKQ9BRR6 497 aa12.86□□□□□ -0.35
HERC3-207ENST00000452979 TMEM60Q9H2L4 133 aa12.86□□□□□ -0.35
HERC3-207ENST00000452979 LTB4R2Q9NPC1 389 aa12.86□□□□□ -0.35
HERC3-207ENST00000452979 GDE1Q9NZC3 331 aa12.86□□□□□ -0.35
HERC3-207ENST00000452979 POLIQ9UNA4 740 aa12.86□□□□□ -0.35
HERC3-207ENST00000452979 ARHGEF37A1IGU5 675 aa12.85□□□□□ -0.35
HERC3-207ENST00000452979 PRKCBP05771 671 aa12.85□□□□□ -0.35
HERC3-207ENST00000452979 RPA1P27694 616 aa12.85□□□□□ -0.35
HERC3-207ENST00000452979 RPS9P46781 194 aaKnown RBP12.85□□□□□ -0.35
HERC3-207ENST00000452979 CLCNKBP51801 687 aa12.85□□□□□ -0.35
HERC3-207ENST00000452979 UBXN2BQ14CS0 331 aa12.85□□□□□ -0.35
HERC3-207ENST00000452979 EEF1DP3Q658K8 133 aa12.85□□□□□ -0.35
HERC3-207ENST00000452979 POTEHQ6S545 545 aa12.85□□□□□ -0.35
HERC3-207ENST00000452979 PADI6Q6TGC4 694 aa12.85□□□□□ -0.35
HERC3-207ENST00000452979 ANKS3Q6ZW76 656 aa12.85□□□□□ -0.35
HERC3-207ENST00000452979 DIS3L2Q8IYB7 885 aaKnown RBP12.85□□□□□ -0.35
HERC3-207ENST00000452979 ZNF461Q8TAF7 563 aa12.85□□□□□ -0.35
HERC3-207ENST00000452979 PLA2G2FQ9BZM2 168 aa12.85□□□□□ -0.35
HERC3-207ENST00000452979 ZSCAN32Q9NX65 697 aa12.85□□□□□ -0.35
HERC3-207ENST00000452979 USP20Q9Y2K6 914 aa12.85□□□□□ -0.35
HERC3-207ENST00000452979 MRPS23Q9Y3D9 190 aaKnown RBP12.85□□□□□ -0.35
HERC3-207ENST00000452979 CDY1Q9Y6F8 540 aa12.85□□□□□ -0.35
HERC3-207ENST00000452979 SHISA7A6NL88 538 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 NCAM2O15394 837 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 TRAPPC3O43617 180 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 B3GAT3O94766 335 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 MICAL2O94851 1124 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 ABLIM3O94929 683 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 PTPN2P17706 415 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 CD72P21854 359 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 SDHBP21912 280 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 EFNA5P52803 228 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 CSTF1Q05048 431 aaKnown RBP12.84□□□□□ -0.35
HERC3-207ENST00000452979 PPP2R5AQ15172 486 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 ME3Q16798 604 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 RSPO4Q2I0M5 234 aaPredicted RBP12.84□□□□□ -0.35
HERC3-207ENST00000452979 SLC5A9Q2M3M2 681 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 DCAF4L1Q3SXM0 396 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 XKR4Q5GH76 650 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 NT5DC1Q5TFE4 455 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 SLC8B1Q6J4K2 584 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 ALKAL1Q6UXT8 129 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 MAMSTRQ6ZN01 415 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 ZNF687Q8N1G0 1237 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 NECAB1Q8N987 351 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 ATRIPQ8WXE1 791 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 GTF3C6Q969F1 213 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 ELSPBP1Q96BH3 223 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 DDX27Q96GQ7 796 aaKnown RBP12.84□□□□□ -0.35
HERC3-207ENST00000452979 EPC1Q9H2F5 836 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 GDAQ9Y2T3 454 aa12.84□□□□□ -0.35
HERC3-207ENST00000452979 SMIM28A0A1B0GU29 152 aa12.83□□□□□ -0.36
HERC3-207ENST00000452979 TBC1D4O60343 1298 aa12.83□□□□□ -0.36
HERC3-207ENST00000452979 RHOP08100 348 aa12.83□□□□□ -0.36
HERC3-207ENST00000452979 MUTP22033 750 aa12.83□□□□□ -0.36
HERC3-207ENST00000452979 TARSP26639 723 aaKnown RBP12.83□□□□□ -0.36
HERC3-207ENST00000452979 TKTP29401 623 aaKnown RBP12.83□□□□□ -0.36
HERC3-207ENST00000452979 TMEM132AQ24JP5 1023 aa12.83□□□□□ -0.36
HERC3-207ENST00000452979 PRSS36Q5K4E3 855 aa12.83□□□□□ -0.36
HERC3-207ENST00000452979 TANGO2Q6ICL3 276 aa12.83□□□□□ -0.36
HERC3-207ENST00000452979 ZNF852Q6ZMS4 543 aa12.83□□□□□ -0.36
HERC3-207ENST00000452979 C3orf58Q8NDZ4 430 aa12.83□□□□□ -0.36
HERC3-207ENST00000452979 NSUN7Q8NE18 718 aaKnown RBP12.83□□□□□ -0.36
HERC3-207ENST00000452979 DEPTORQ8TB45 409 aa12.83□□□□□ -0.36
HERC3-207ENST00000452979 DNASE1L2Q92874 299 aa12.83□□□□□ -0.36
HERC3-207ENST00000452979 MCRS1Q96EZ8 462 aa12.83□□□□□ -0.36
HERC3-207ENST00000452979 FAM126AQ9BYI3 521 aaPredicted RBP12.83□□□□□ -0.36
HERC3-207ENST00000452979 PRMT8Q9NR22 394 aaPredicted RBP12.83□□□□□ -0.36
HERC3-207ENST00000452979 MRPS17Q9Y2R5 130 aaKnown RBP12.83□□□□□ -0.36
HERC3-207ENST00000452979 COL4A2P08572 1712 aa12.82□□□□□ -0.36
HERC3-207ENST00000452979 ARHGEF35A5YM69 484 aa12.82□□□□□ -0.36
HERC3-207ENST00000452979 I3L4J1 428 aa12.82□□□□□ -0.36
HERC3-207ENST00000452979 FCARP24071 287 aa12.82□□□□□ -0.36
HERC3-207ENST00000452979 ROR1Q01973 937 aa12.82□□□□□ -0.36
HERC3-207ENST00000452979 ADCY1Q08828 1119 aa12.82□□□□□ -0.36
HERC3-207ENST00000452979 ORC2Q13416 577 aaPredicted RBP12.82□□□□□ -0.36
HERC3-207ENST00000452979 TRIM29Q14134 588 aa12.82□□□□□ -0.36
HERC3-207ENST00000452979 MRPL58Q14197 206 aaKnown RBP12.82□□□□□ -0.36
HERC3-207ENST00000452979 GLRA4Q5JXX5 417 aa12.82□□□□□ -0.36
HERC3-207ENST00000452979 ATF7IP2Q5U623 682 aa12.82□□□□□ -0.36
HERC3-207ENST00000452979 TPRG1Q6ZUI0 275 aa12.82□□□□□ -0.36
HERC3-207ENST00000452979 APBB1IPQ7Z5R6 666 aaPredicted RBP12.82□□□□□ -0.36
HERC3-207ENST00000452979 TCEAL8Q8IYN2 117 aa12.82□□□□□ -0.36
HERC3-207ENST00000452979 ERMNQ8TAM6 284 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms