RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 ABCD1P33897 745 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 LMAN1P49257 510 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 TFAMQ00059 246 aaKnown RBP12.63□□□□□ -0.39
VTA1-203ENST00000452973 GCNT1Q02742 428 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 IER5Q5VY09 327 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 C15orf39Q6ZRI6 1047 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 ZBTB8OSQ8IWT0 167 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 DDX1Q92499 740 aaKnown RBP12.63□□□□□ -0.39
VTA1-203ENST00000452973 L3MBTL3Q96JM7 780 aaPredicted RBP12.63□□□□□ -0.39
VTA1-203ENST00000452973 MRPL4Q9BYD3 311 aaKnown RBP12.63□□□□□ -0.39
VTA1-203ENST00000452973 MTMR12Q9C0I1 747 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 DPH5Q9H2P9 285 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 TMEM59LQ9UK28 342 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 MSCO60682 206 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 SYF2O95926 243 aaKnown RBP12.63□□□□□ -0.39
VTA1-203ENST00000452973 GZMAP12544 262 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 ADORA2AP29274 412 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 NCOA4Q13772 614 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 CEP120Q8N960 986 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 GPRC5AQ8NFJ5 357 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 PPP1R13LQ8WUF5 828 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 TRIM7Q9C029 511 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 NUB1Q9Y5A7 615 aa12.63□□□□□ -0.39
VTA1-203ENST00000452973 NOP14P78316 857 aaKnown RBP12.62□□□□□ -0.39
VTA1-203ENST00000452973 PAK2Q13177 524 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 CCDC62Q6P9F0 684 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 KCNV1Q6PIU1 500 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 CYFIP2Q96F07 1278 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 TMEM134Q9H6X4 195 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 GDF3Q9NR23 364 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 CCL15-CCL14A0A0B4J2E2 113 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 CES2O00748 559 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 TOM1L1O75674 476 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 ZNF286BP0CG31 522 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 CUL2Q13617 745 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 CCL15Q16663 113 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 DAB2IPQ5VWQ8 1189 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 ACAD10Q6JQN1 1059 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 SCARA5Q6ZMJ2 495 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 TMEM130Q8N3G9 435 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 GOLGA6L1Q8N7Z2 621 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 RUFY1Q96T51 708 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 SMARCAD1Q9H4L7 1026 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 FAM204AQ9H8W3 233 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 VIPAS39Q9H9C1 493 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 ERVK-5Q9HDB9 667 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 IVNS1ABPQ9Y6Y0 642 aa12.62□□□□□ -0.39
VTA1-203ENST00000452973 GRIN3BO60391 1043 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 PIGRP01833 764 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 EFNA5P52803 228 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 MXD4Q14582 209 aaPredicted RBP12.61□□□□□ -0.39
VTA1-203ENST00000452973 EMBQ6PCB8 327 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 UBL4BQ8N7F7 174 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 FAM71BQ8TC56 605 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 TCP11Q8WWU5 503 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 CGRRF1Q99675 332 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 ACO2Q99798 780 aaKnown RBP12.61□□□□□ -0.39
VTA1-203ENST00000452973 TRIM51Q9BSJ1 452 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 IMPG2Q9BZV3 1241 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 MINDY3Q9H8M7 445 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 ANAPC7Q9UJX3 599 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 PCDHB2Q9Y5E7 798 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 ATP8B3O60423 1300 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 CNTNAP2Q9UHC6 1331 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 BTBD19C9JJ37 291 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 AGPSO00116 658 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 RRM1P23921 792 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 ADCYAP1R1P41586 468 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 CLEC16AQ2KHT3 1053 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 ZNF568Q3ZCX4 644 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 LDLRAD1Q5T700 205 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 ENOSF1Q7L5Y1 443 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 RASGEF1CQ8N431 466 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 PNMA3Q9UL41 463 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 ADGRA2Q96PE1 1338 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 DAPK3O43293 454 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 THAP12O43422 761 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 INSRRP14616 1297 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 SCP2P22307 547 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 GNA15P30679 374 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 NSFP46459 744 aaKnown RBP12.61□□□□□ -0.39
VTA1-203ENST00000452973 MYL6P60660 151 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 CLDN10P78369 228 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 PLPPR4Q7Z2D5 763 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 AFG1LQ8WV93 481 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 C11orf70Q9BRQ4 267 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 CARD9Q9H257 536 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 MED4Q9NPJ6 270 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 GTF3C4Q9UKN8 822 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 GINS2Q9Y248 185 aa12.61□□□□□ -0.39
VTA1-203ENST00000452973 ASB14A6NK59 587 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 KIAA0391O15091 583 aaKnown RBP12.6□□□□□ -0.39
VTA1-203ENST00000452973 ZC3H11AO75152 810 aaKnown RBP eCLIP12.6□□□□□ -0.39
VTA1-203ENST00000452973 KRT19P08727 400 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 DNAJC21Q5F1R6 531 aaKnown RBP12.6□□□□□ -0.39
VTA1-203ENST00000452973 EEF1DP3Q658K8 133 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 DPP9Q86TI2 863 aa12.6□□□□□ -0.39
VTA1-203ENST00000452973 RBBP8NLQ8NC74 664 aaPredicted RBP12.6□□□□□ -0.39
VTA1-203ENST00000452973 CALR3Q96L12 384 aaKnown RBP12.6□□□□□ -0.39
VTA1-203ENST00000452973 SCLT1Q96NL6 688 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms