RNA–Protein interactions for RNA: ENST00000452065.5

HDLBP-224, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-224ENST00000452065 SPRED2Q7Z698 418 aa12.09□□□□□ -0.47
HDLBP-224ENST00000452065 CBWD2Q8IUF1 395 aa12.09□□□□□ -0.47
HDLBP-224ENST00000452065 BRSK2Q8IWQ3 736 aa12.09□□□□□ -0.47
HDLBP-224ENST00000452065 SLC39A11Q8N1S5 342 aa12.09□□□□□ -0.47
HDLBP-224ENST00000452065 KLHL23Q8NBE8 558 aa12.09□□□□□ -0.47
HDLBP-224ENST00000452065 ZSWIM2Q8NEG5 633 aa12.09□□□□□ -0.47
HDLBP-224ENST00000452065 FBXO22Q8NEZ5 403 aa12.09□□□□□ -0.47
HDLBP-224ENST00000452065 ARNTL2Q8WYA1 636 aa12.09□□□□□ -0.47
HDLBP-224ENST00000452065 DDX27Q96GQ7 796 aaKnown RBP12.09□□□□□ -0.47
HDLBP-224ENST00000452065 MFSD14AQ96MC6 490 aa12.09□□□□□ -0.47
HDLBP-224ENST00000452065 COLEC11Q9BWP8 271 aa12.09□□□□□ -0.47
HDLBP-224ENST00000452065 RBAKQ9NYW8 714 aaPredicted RBP12.09□□□□□ -0.47
HDLBP-224ENST00000452065 STK39Q9UEW8 545 aa12.09□□□□□ -0.47
HDLBP-224ENST00000452065 LZTS1Q9Y250 596 aa12.09□□□□□ -0.47
HDLBP-224ENST00000452065 GOLGA8IPA6NC78 632 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 GOLGA8JA6NMD2 632 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 TMEM189-UBE2V1I3L0A0 370 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 EXOC3O60645 756 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 ZC3H11AO75152 810 aaKnown RBP eCLIP12.08□□□□□ -0.48
HDLBP-224ENST00000452065 FGF18O76093 207 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 EFEMP2O95967 443 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 NR2F2P24468 414 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 SLC11A1P49279 550 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 CYP2J2P51589 502 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 NLRP12P59046 1061 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 CLDN10P78369 228 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 FKBP3Q00688 224 aaKnown RBP12.08□□□□□ -0.48
HDLBP-224ENST00000452065 KRT17Q04695 432 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 ENPEPQ07075 957 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 ADAM9Q13443 819 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 GPM6BQ13491 265 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 GRIN2CQ14957 1233 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 UPP1Q16831 310 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 GLRA4Q5JXX5 417 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 SPATA1Q5VX52 437 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 ANKRD40Q6AI12 368 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 DCLRE1AQ6PJP8 1040 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 ZC3H3Q8IXZ2 948 aaKnown RBP12.08□□□□□ -0.48
HDLBP-224ENST00000452065 SYAP1Q96A49 352 aaPredicted RBP12.08□□□□□ -0.48
HDLBP-224ENST00000452065 KIF12Q96FN5 646 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 IGSF21Q96ID5 467 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 TSG101Q99816 390 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 LMAN2LQ9H0V9 348 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 CERS4Q9HA82 394 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 MTMR10Q9NXD2 777 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 LMCD1Q9NZU5 365 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 TMEM63CQ9P1W3 806 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 UBQLN1Q9UMX0 589 aaKnown RBP12.08□□□□□ -0.48
HDLBP-224ENST00000452065 FRMD4BQ9Y2L6 1034 aa12.08□□□□□ -0.48
HDLBP-224ENST00000452065 BICDL2A1A5D9 508 aa12.07□□□□□ -0.48
HDLBP-224ENST00000452065 LPXNO60711 386 aa12.07□□□□□ -0.48
HDLBP-224ENST00000452065 ITGB1P05556 798 aa12.07□□□□□ -0.48
HDLBP-224ENST00000452065 PAX3P23760 479 aa12.07□□□□□ -0.48
HDLBP-224ENST00000452065 LRPAP1P30533 357 aa12.07□□□□□ -0.48
HDLBP-224ENST00000452065 PSMC2P35998 433 aaKnown RBP12.07□□□□□ -0.48
HDLBP-224ENST00000452065 OR1G1P47890 313 aa12.07□□□□□ -0.48
HDLBP-224ENST00000452065 PMS1P54277 932 aaKnown RBP12.07□□□□□ -0.48
HDLBP-224ENST00000452065 SOX4Q06945 474 aaPredicted RBP12.07□□□□□ -0.48
HDLBP-224ENST00000452065 CYP24A1Q07973 514 aa12.07□□□□□ -0.48
HDLBP-224ENST00000452065 TMEM132DQ14C87 1099 aa12.07□□□□□ -0.48
HDLBP-224ENST00000452065 PSMD6Q15008 389 aa12.07□□□□□ -0.48
HDLBP-224ENST00000452065 JADE1Q6IE81 842 aa12.07□□□□□ -0.48
HDLBP-224ENST00000452065 TTI2Q6NXR4 508 aa12.07□□□□□ -0.48
HDLBP-224ENST00000452065 DEFB123Q8N688 67 aa12.07□□□□□ -0.48
HDLBP-224ENST00000452065 RDH13Q8NBN7 331 aa12.07□□□□□ -0.48
HDLBP-224ENST00000452065 SPPL3Q8TCT6 385 aa12.07□□□□□ -0.48
HDLBP-224ENST00000452065 CACTINQ8WUQ7 758 aaKnown RBP12.07□□□□□ -0.48
HDLBP-224ENST00000452065 FAM212AQ96EL1 285 aa12.07□□□□□ -0.48
HDLBP-224ENST00000452065 MKNK1Q9BUB5 465 aa12.07□□□□□ -0.48
HDLBP-224ENST00000452065 PDE11AQ9HCR9 933 aa12.07□□□□□ -0.48
HDLBP-224ENST00000452065 PUF60Q9UHX1 559 aaKnown RBP12.07□□□□□ -0.48
HDLBP-224ENST00000452065 DACH1Q9UI36 760 aa12.07□□□□□ -0.48
HDLBP-224ENST00000452065 MTUS1Q9ULD2 1270 aa12.07□□□□□ -0.48
HDLBP-224ENST00000452065 COL4A4P53420 1690 aaPredicted RBP12.06□□□□□ -0.48
HDLBP-224ENST00000452065 MYO9BQ13459 2157 aa12.06□□□□□ -0.48
HDLBP-224ENST00000452065 EPOPA6NHQ4 379 aa12.06□□□□□ -0.48
HDLBP-224ENST00000452065 NT5C1B-RDH14C9J2C7 533 aa12.06□□□□□ -0.48
HDLBP-224ENST00000452065 IKBKBO14920 756 aa12.06□□□□□ -0.48
HDLBP-224ENST00000452065 CETN3O15182 167 aa12.06□□□□□ -0.48
HDLBP-224ENST00000452065 AKAP3O75969 853 aa12.06□□□□□ -0.48
HDLBP-224ENST00000452065 LETM1O95202 739 aaPredicted RBP12.06□□□□□ -0.48
HDLBP-224ENST00000452065 NFICP08651 508 aa12.06□□□□□ -0.48
HDLBP-224ENST00000452065 ERCC5P28715 1186 aaPredicted RBP12.06□□□□□ -0.48
HDLBP-224ENST00000452065 PBX3P40426 434 aa12.06□□□□□ -0.48
HDLBP-224ENST00000452065 CASP4P49662 377 aa12.06□□□□□ -0.48
HDLBP-224ENST00000452065 CLCNKBP51801 687 aa12.06□□□□□ -0.48
HDLBP-224ENST00000452065 WNT7BP56706 349 aa12.06□□□□□ -0.48
HDLBP-224ENST00000452065 SPAG1Q07617 926 aa12.06□□□□□ -0.48
HDLBP-224ENST00000452065 PAK1Q13153 545 aa12.06□□□□□ -0.48
HDLBP-224ENST00000452065 PDE12Q6L8Q7 609 aaKnown RBP12.06□□□□□ -0.48
HDLBP-224ENST00000452065 Q7L0L9 218 aa12.06□□□□□ -0.48
HDLBP-224ENST00000452065 DDX53Q86TM3 631 aaKnown RBP12.06□□□□□ -0.48
HDLBP-224ENST00000452065 WDR49Q8IV35 697 aa12.06□□□□□ -0.48
HDLBP-224ENST00000452065 BEST2Q8NFU1 509 aa12.06□□□□□ -0.48
HDLBP-224ENST00000452065 TMC2Q8TDI7 906 aa12.06□□□□□ -0.48
HDLBP-224ENST00000452065 PARD3BQ8TEW8 1205 aa12.06□□□□□ -0.48
HDLBP-224ENST00000452065 NELFBQ8WX92 580 aa12.06□□□□□ -0.48
HDLBP-224ENST00000452065 C18orf25Q96B23 403 aaPredicted RBP12.06□□□□□ -0.48
HDLBP-224ENST00000452065 TMEM169Q96HH4 297 aa12.06□□□□□ -0.48
HDLBP-224ENST00000452065 CEP63Q96MT8 703 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms