RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 CBWD1Q9BRT8 395 aa15.63■□□□□ 0.09
COL3A1-203ENST00000450867 RPF1Q9H9Y2 349 aaKnown RBP15.63■□□□□ 0.09
COL3A1-203ENST00000450867 ADAM28Q9UKQ2 775 aa15.63■□□□□ 0.09
COL3A1-203ENST00000450867 PRG3Q9Y2Y8 225 aaPredicted RBP15.63■□□□□ 0.09
COL3A1-203ENST00000450867 LACTBL1A8MY62 500 aa15.62■□□□□ 0.09
COL3A1-203ENST00000450867 EXTL3O43909 919 aa15.62■□□□□ 0.09
COL3A1-203ENST00000450867 KINO60870 393 aaKnown RBP15.62■□□□□ 0.09
COL3A1-203ENST00000450867 SOD2P04179 222 aa15.62■□□□□ 0.09
COL3A1-203ENST00000450867 CTSAP10619 480 aa15.62■□□□□ 0.09
COL3A1-203ENST00000450867 ACOT2P49753 483 aa15.62■□□□□ 0.09
COL3A1-203ENST00000450867 PNOCQ13519 176 aa15.62■□□□□ 0.09
COL3A1-203ENST00000450867 UPP1Q16831 310 aa15.62■□□□□ 0.09
COL3A1-203ENST00000450867 KNOP1Q1ED39 458 aaKnown RBP15.62■□□□□ 0.09
COL3A1-203ENST00000450867 COBLL1Q53SF7 1204 aa15.62■□□□□ 0.09
COL3A1-203ENST00000450867 TCEAL5Q5H9L2 206 aa15.62■□□□□ 0.09
COL3A1-203ENST00000450867 BRSK2Q8IWQ3 736 aa15.62■□□□□ 0.09
COL3A1-203ENST00000450867 GOLGA5Q8TBA6 731 aa15.62■□□□□ 0.09
COL3A1-203ENST00000450867 PPP2R3CQ969Q6 453 aa15.62■□□□□ 0.09
COL3A1-203ENST00000450867 DDX27Q96GQ7 796 aaKnown RBP15.62■□□□□ 0.09
COL3A1-203ENST00000450867 HERC2P3Q9BVR0 1158 aa15.62■□□□□ 0.09
COL3A1-203ENST00000450867 KCTD10Q9H3F6 313 aa15.62■□□□□ 0.09
COL3A1-203ENST00000450867 AGPAT3Q9NRZ7 376 aa15.62■□□□□ 0.09
COL3A1-203ENST00000450867 CHST7Q9NS84 486 aa15.62■□□□□ 0.09
COL3A1-203ENST00000450867 HOOK1Q9UJC3 728 aaKnown RBP15.62■□□□□ 0.09
COL3A1-203ENST00000450867 C2CD2Q9Y426 696 aa15.62■□□□□ 0.09
COL3A1-203ENST00000450867 UNC80Q8N2C7 3258 aa15.62■□□□□ 0.09
COL3A1-203ENST00000450867 PLXNA3P51805 1871 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 NCOR1O75376 2440 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 FSD2A1L4K1 749 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 CASTOR2A6NHX0 329 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 F8W810 466 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 PDXKO00764 312 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 NCK2O43639 380 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 LILRB3O75022 631 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 KIF20AO95235 890 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 KIF4AO95239 1232 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 IL18RAPO95256 599 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 LRPAP1P30533 357 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 RPL9P32969 192 aaKnown RBP15.61■□□□□ 0.09
COL3A1-203ENST00000450867 HYAL1Q12794 435 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 SMC1AQ14683 1233 aaKnown RBP15.61■□□□□ 0.09
COL3A1-203ENST00000450867 CTC1Q2NKJ3 1217 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 ARMCX5Q6P1M9 558 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 DCLRE1AQ6PJP8 1040 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 CD300LGQ6UXG3 332 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 HS2ST1Q7LGA3 356 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 NT5DC4Q86YG4 428 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 SLC9A9Q8IVB4 645 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 VPS52Q8N1B4 723 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 GPD1LQ8N335 351 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 GUF1Q8N442 669 aaKnown RBP15.61■□□□□ 0.09
COL3A1-203ENST00000450867 MRPL43Q8N983 215 aaKnown RBP15.61■□□□□ 0.09
COL3A1-203ENST00000450867 ZSWIM2Q8NEG5 633 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 CDCA3Q99618 268 aaPredicted RBP15.61■□□□□ 0.09
COL3A1-203ENST00000450867 TCF25Q9BQ70 676 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 GTPBP4Q9BZE4 634 aaKnown RBP15.61■□□□□ 0.09
COL3A1-203ENST00000450867 KIAA1586Q9HCI6 787 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 RMND1Q9NWS8 449 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 HSPBP1Q9NZL4 362 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 UBQLN1Q9UMX0 589 aaKnown RBP15.61■□□□□ 0.09
COL3A1-203ENST00000450867 SF3B1O75533 1304 aaKnown RBP eCLIP15.61■□□□□ 0.09
COL3A1-203ENST00000450867 TSC2P49815 1807 aa15.61■□□□□ 0.09
COL3A1-203ENST00000450867 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.6■□□□□ 0.09
COL3A1-203ENST00000450867 C2orf71A6NGG8 1288 aa15.6■□□□□ 0.09
COL3A1-203ENST00000450867 XPOTO43592 962 aaKnown RBP15.6■□□□□ 0.09
COL3A1-203ENST00000450867 PRPF40AO75400 957 aaKnown RBP15.6■□□□□ 0.09
COL3A1-203ENST00000450867 SMC2O95347 1197 aa15.6■□□□□ 0.09
COL3A1-203ENST00000450867 CLCNKBP51801 687 aa15.6■□□□□ 0.09
COL3A1-203ENST00000450867 ELAVL2Q12926 359 aaKnown RBP15.6■□□□□ 0.09
COL3A1-203ENST00000450867 PTPN14Q15678 1187 aa15.6■□□□□ 0.09
COL3A1-203ENST00000450867 CCDC85BQ15834 202 aaPredicted RBP15.6■□□□□ 0.09
COL3A1-203ENST00000450867 SPATA1Q5VX52 437 aa15.6■□□□□ 0.09
COL3A1-203ENST00000450867 FUT10Q6P4F1 479 aa15.6■□□□□ 0.09
COL3A1-203ENST00000450867 TMC7Q7Z402 723 aa15.6■□□□□ 0.09
COL3A1-203ENST00000450867 ADGRD2Q7Z7M1 963 aa15.6■□□□□ 0.09
COL3A1-203ENST00000450867 MICALL1Q8N3F8 863 aa15.6■□□□□ 0.09
COL3A1-203ENST00000450867 C18orf25Q96B23 403 aaPredicted RBP15.6■□□□□ 0.09
COL3A1-203ENST00000450867 SAAL1Q96ER3 474 aa15.6■□□□□ 0.09
COL3A1-203ENST00000450867 FAM213AQ9BRX8 229 aa15.6■□□□□ 0.09
COL3A1-203ENST00000450867 GPR62Q9BZJ7 368 aa15.6■□□□□ 0.09
COL3A1-203ENST00000450867 GOLGA2P5Q9HBQ8 144 aa15.6■□□□□ 0.09
COL3A1-203ENST00000450867 ENTPD7Q9NQZ7 604 aa15.6■□□□□ 0.09
COL3A1-203ENST00000450867 CACNG4Q9UBN1 327 aa15.6■□□□□ 0.09
COL3A1-203ENST00000450867 COG5Q9UP83 839 aa15.6■□□□□ 0.09
COL3A1-203ENST00000450867 TRAF3IP3Q9Y228 551 aa15.6■□□□□ 0.09
COL3A1-203ENST00000450867 PCDHGC5Q9Y5F6 944 aa15.6■□□□□ 0.09
COL3A1-203ENST00000450867 PCDHA5Q9Y5H7 936 aa15.6■□□□□ 0.09
COL3A1-203ENST00000450867 XIRP2A4UGR9 3374 aa15.59■□□□□ 0.09
COL3A1-203ENST00000450867 HIDE1A8MVS5 230 aa15.59■□□□□ 0.09
COL3A1-203ENST00000450867 DSG1Q02413 1049 aa15.59■□□□□ 0.09
COL3A1-203ENST00000450867 KCNC3Q14003 757 aa15.59■□□□□ 0.09
COL3A1-203ENST00000450867 MYBPC2Q14324 1141 aa15.59■□□□□ 0.09
COL3A1-203ENST00000450867 BMS1Q14692 1282 aaKnown RBP15.59■□□□□ 0.09
COL3A1-203ENST00000450867 NFIL3Q16649 462 aa15.59■□□□□ 0.09
COL3A1-203ENST00000450867 DUSP6Q16828 381 aa15.59■□□□□ 0.09
COL3A1-203ENST00000450867 KIAA0319Q5VV43 1072 aa15.59■□□□□ 0.09
COL3A1-203ENST00000450867 PLPP4Q5VZY2 271 aa15.59■□□□□ 0.09
COL3A1-203ENST00000450867 JADE1Q6IE81 842 aa15.59■□□□□ 0.09
COL3A1-203ENST00000450867 NELFCDQ8IXH7 590 aa15.59■□□□□ 0.09
COL3A1-203ENST00000450867 EFHBQ8N7U6 833 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms