RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 ANO6Q4KMQ2 910 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 SARM1Q6SZW1 724 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 ADSSL1Q8N142 457 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 GUF1Q8N442 669 aaKnown RBP10.71□□□□□ -0.7
CCDC171-203ENST00000449575 PHOSPHO2Q8TCD6 241 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 CCDC47Q96A33 483 aaKnown RBP10.71□□□□□ -0.7
CCDC171-203ENST00000449575 MRFAP1L1Q96HT8 127 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 MED15Q96RN5 788 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 YME1L1Q96TA2 773 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 ELAC1Q9H777 363 aaKnown RBP10.71□□□□□ -0.7
CCDC171-203ENST00000449575 TMEM206Q9H813 350 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 RSAD1Q9HA92 442 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 AGO2Q9UKV8 859 aaKnown RBP10.71□□□□□ -0.7
CCDC171-203ENST00000449575 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.7□□□□□ -0.7
CCDC171-203ENST00000449575 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.7□□□□□ -0.7
CCDC171-203ENST00000449575 PTGESO14684 152 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 LINC00271P0C7V0 271 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 RAB27AP51159 221 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 SCNN1GP51170 649 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 CYP2J2P51589 502 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 SLC10A6Q3KNW5 377 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 DCAF4L1Q3SXM0 396 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 SCARA3Q6AZY7 606 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 ARMCX5Q6P1M9 558 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 STXBP4Q6ZWJ1 553 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 RDH13Q8NBN7 331 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 RABGGTAQ92696 567 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 ZMAT2Q96NC0 199 aaKnown RBP10.7□□□□□ -0.7
CCDC171-203ENST00000449575 FAM213AQ9BRX8 229 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 EXOC7Q9UPT5 735 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 OGTO15294 1046 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 IGFBP6P24592 240 aaPredicted RBP10.7□□□□□ -0.7
CCDC171-203ENST00000449575 GRM5P41594 1212 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 CASP4P49662 377 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 STX17P56962 302 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 ENOX2Q16206 610 aaKnown RBP10.7□□□□□ -0.7
CCDC171-203ENST00000449575 ZCWPW2Q504Y3 356 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 TMCO3Q6UWJ1 677 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 ZNF280BQ86YH2 543 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 CBWD2Q8IUF1 395 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 RAD9AQ99638 391 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 NKX2-4Q9H2Z4 354 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 CERS4Q9HA82 394 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 ZNF446Q9NWS9 450 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 HSPBP1Q9NZL4 362 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 RSPH14Q9UHP6 348 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 CPSF3Q9UKF6 684 aaKnown RBP10.7□□□□□ -0.7
CCDC171-203ENST00000449575 FHOD1Q9Y613 1164 aa10.7□□□□□ -0.7
CCDC171-203ENST00000449575 UBE4BO95155 1302 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 GOLGA6L19H0YKK7 550 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 DDHD2O94830 711 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 PNMA6AP0CW24 399 aaPredicted RBP10.69□□□□□ -0.7
CCDC171-203ENST00000449575 SKILP12757 684 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 SCP2P22307 547 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 DNAJB2P25686 324 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 ANKRD40Q6AI12 368 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 L2HGDHQ9H9P8 463 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 TYW1Q9NV66 732 aaKnown RBP10.69□□□□□ -0.7
CCDC171-203ENST00000449575 TBC1D13Q9NVG8 400 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 DNAJB4Q9UDY4 337 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 MTUS1Q9ULD2 1270 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 INSL6Q9Y581 213 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 MRPL42Q9Y6G3 142 aaKnown RBP10.69□□□□□ -0.7
CCDC171-203ENST00000449575 F8W810 466 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 ADRB2P07550 413 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 ZNF165P49910 485 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 GSDMDP57764 484 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 BTG3Q14201 252 aaPredicted RBP10.69□□□□□ -0.7
CCDC171-203ENST00000449575 LRIT3Q3SXY7 679 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 ALKAL1Q6UXT8 129 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 FAM212AQ96EL1 285 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 ACAP3Q96P50 834 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 PAAF1Q9BRP4 392 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 GOLGA2P5Q9HBQ8 144 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 CTNND2Q9UQB3 1225 aa10.69□□□□□ -0.7
CCDC171-203ENST00000449575 C5orf42Q9H799 3197 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 LINC01553A4QN01 128 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 PDXKO00764 312 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 SKIP12755 728 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 GARTP22102 1010 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 CASQ1P31415 396 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 ABCD1P33897 745 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 SOX4Q06945 474 aaPredicted RBP10.68□□□□□ -0.7
CCDC171-203ENST00000449575 SLFN12LQ6IEE8 588 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 CENPPQ6IPU0 288 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 CCAR2Q8N163 923 aaKnown RBP10.68□□□□□ -0.7
CCDC171-203ENST00000449575 SP7Q8TDD2 431 aaPredicted RBP10.68□□□□□ -0.7
CCDC171-203ENST00000449575 PGBD4Q96DM1 585 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 C17orf80Q9BSJ5 609 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 TMEM117Q9H0C3 514 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 CWH43Q9H720 699 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.68□□□□□ -0.7
CCDC171-203ENST00000449575 TRAF3IP3Q9Y228 551 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 TTC26A0AVF1 554 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 LACTBL1A8MY62 500 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 NT5C1B-RDH14C9J2C7 533 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 NRDCO43847 1150 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 NR3C1P04150 777 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 CLCN6P51797 869 aa10.68□□□□□ -0.7
CCDC171-203ENST00000449575 GUCY2FP51841 1108 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms