RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 PRRC2BQ5JSZ5 2229 aaKnown RBP9.05□□□□□ -0.96
HCG18-238ENST00000449544 ZNF263O14978 683 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 CCL16O15467 120 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 SPOPO43791 374 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 LRRN2O75325 713 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 NR3C1P04150 777 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 BMPR1AP36894 532 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 LHX1P48742 406 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 ADCY1Q08828 1119 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 NDUFAF2Q8N183 169 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 KLHL23Q8NBE8 558 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 GIPC2Q8TF65 315 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 CD207Q9UJ71 328 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 COG5Q9UP83 839 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 LUC7L2Q9Y383 392 aaKnown RBP9.05□□□□□ -0.96
HCG18-238ENST00000449544 NUP98P52948 1817 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 ABCB4P21439 1286 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 ATP2C1P98194 919 aaPredicted RBP9.05□□□□□ -0.96
HCG18-238ENST00000449544 KNOP1Q1ED39 458 aaKnown RBP9.05□□□□□ -0.96
HCG18-238ENST00000449544 TMEM270Q6UE05 265 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 TOGARAM2Q6ZUX3 1019 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 SIAH1Q8IUQ4 282 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 NECTIN4Q96NY8 510 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 FAM49BQ9NUQ9 324 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 TBX20Q9UMR3 447 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 CDY1Q9Y6F8 540 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 IKBKBO14920 756 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 NDUFS2O75306 463 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 STK10O94804 968 aaKnown RBP9.05□□□□□ -0.96
HCG18-238ENST00000449544 FAM200BP0CF97 657 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 KCNA2P16389 499 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 ACO1P21399 889 aaKnown RBP9.05□□□□□ -0.96
HCG18-238ENST00000449544 MUTP22033 750 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 KRT81Q14533 505 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 SGO2Q562F6 1265 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 RINT1Q6NUQ1 792 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 ZNF449Q6P9G9 518 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 DCLRE1AQ6PJP8 1040 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 ABHD15Q6UXT9 468 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 C12orf50Q8NA57 414 aaPredicted RBP9.05□□□□□ -0.96
HCG18-238ENST00000449544 ZBTB10Q96DT7 871 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 XPO6Q96QU8 1125 aaKnown RBP9.05□□□□□ -0.96
HCG18-238ENST00000449544 IL25Q9H293 177 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 ZFP14Q9HCL3 533 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 PDE11AQ9HCR9 933 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 STAP1Q9ULZ2 295 aa9.05□□□□□ -0.96
HCG18-238ENST00000449544 DLL1O00548 723 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 MED24O75448 989 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 C8AP07357 584 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 NCOA4Q13772 614 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 SLC39A12Q504Y0 691 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 HEATR6Q6AI08 1181 aaKnown RBP9.04□□□□□ -0.96
HCG18-238ENST00000449544 TAPT1Q6NXT6 567 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 FUT10Q6P4F1 479 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 TMCO2Q7Z6W1 182 aaPredicted RBP9.04□□□□□ -0.96
HCG18-238ENST00000449544 AOPEPQ8N6M6 819 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 SLC7A14Q8TBB6 771 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 PAK6Q9NQU5 681 aaPredicted RBP9.04□□□□□ -0.96
HCG18-238ENST00000449544 MYO1AQ9UBC5 1043 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 USP18Q9UMW8 372 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.04□□□□□ -0.96
HCG18-238ENST00000449544 M0QYV0 167 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 RFXAPO00287 272 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 CNMDO75829 334 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 ALDH1A2O94788 518 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 GJB5O95377 273 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 VAMP7P51809 220 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 KIF11P52732 1056 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 ITGB3BPQ13352 177 aaPredicted RBP9.04□□□□□ -0.96
HCG18-238ENST00000449544 ASIC2Q16515 512 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 ZC2HC1CQ53FD0 456 aaPredicted RBP9.04□□□□□ -0.96
HCG18-238ENST00000449544 ADGRF2Q8IZF7 708 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 DDI1Q8WTU0 396 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 ING5Q8WYH8 240 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 ERCC4Q92889 916 aaPredicted RBP9.04□□□□□ -0.96
HCG18-238ENST00000449544 SUDS3Q9H7L9 328 aaPredicted RBP9.04□□□□□ -0.96
HCG18-238ENST00000449544 UBE2TQ9NPD8 197 aaPredicted RBP9.04□□□□□ -0.96
HCG18-238ENST00000449544 TAB2Q9NYJ8 693 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 HSPBP1Q9NZL4 362 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 CTTNBP2NLQ9P2B4 639 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 CGNQ9P2M7 1197 aaKnown RBP9.04□□□□□ -0.96
HCG18-238ENST00000449544 ADAM28Q9UKQ2 775 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 PCDHB9Q9Y5E1 797 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 PTENP60484 403 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 SGSM1Q2NKQ1 1148 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 CCDC122Q5T0U0 273 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 KRT39Q6A163 491 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 LINC00301Q8NCQ3 95 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 GDAP1Q8TB36 358 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 AUTS2Q8WXX7 1259 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 GSDMAQ96QA5 445 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 SELENOOQ9BVL4 669 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 BCO2Q9BYV7 579 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 DZANK1Q9NVP4 752 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 IRAK4Q9NWZ3 460 aa9.04□□□□□ -0.96
HCG18-238ENST00000449544 DDX43Q9NXZ2 648 aaKnown RBP9.04□□□□□ -0.96
HCG18-238ENST00000449544 PVALEFA0A1B0GWK0 134 aa9.03□□□□□ -0.96
HCG18-238ENST00000449544 AP1G2O75843 785 aa9.03□□□□□ -0.96
HCG18-238ENST00000449544 AFPP02771 609 aaKnown RBP9.03□□□□□ -0.96
HCG18-238ENST00000449544 FXR2P51116 673 aaKnown RBP eCLIP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms