RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 CARNS1A5YM72 827 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 HIDE1A8MVS5 230 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 LACTBL1A8MY62 500 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 C2CD2LO14523 706 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 FSCN2O14926 492 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 PER2O15055 1255 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 LINC01565O15544 149 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 MYL1P05976 194 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 HYAL1Q12794 435 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 STK4Q13043 487 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 SMC1AQ14683 1233 aaKnown RBP12.97□□□□□ -0.33
RFC4-208ENST00000447345 KYAT1Q16773 422 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 XKR4Q5GH76 650 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 FUT10Q6P4F1 479 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 ALKAL1Q6UXT8 129 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 DDX53Q86TM3 631 aaKnown RBP12.97□□□□□ -0.33
RFC4-208ENST00000447345 TMEM87AQ8NBN3 555 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 ZNF507Q8TCN5 953 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 PPP2R3CQ969Q6 453 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 CCDC47Q96A33 483 aaKnown RBP12.97□□□□□ -0.33
RFC4-208ENST00000447345 CCDC34Q96HJ3 373 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 SLC38A7Q9NVC3 462 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 CLDND1Q9NY35 253 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 THEGQ9P2T0 379 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 ADAM28Q9UKQ2 775 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 STYXL1Q9Y6J8 313 aa12.97□□□□□ -0.33
RFC4-208ENST00000447345 MTCL1Q9Y4B5 1905 aaKnown RBP12.96□□□□□ -0.33
RFC4-208ENST00000447345 TTC26A0AVF1 554 aa12.96□□□□□ -0.33
RFC4-208ENST00000447345 PODXLO00592 558 aa12.96□□□□□ -0.33
RFC4-208ENST00000447345 CLIC2O15247 247 aa12.96□□□□□ -0.33
RFC4-208ENST00000447345 KINO60870 393 aaKnown RBP12.96□□□□□ -0.33
RFC4-208ENST00000447345 PRPF40AO75400 957 aaKnown RBP12.96□□□□□ -0.33
RFC4-208ENST00000447345 TADA2AO75478 443 aa12.96□□□□□ -0.33
RFC4-208ENST00000447345 URODP06132 367 aa12.96□□□□□ -0.33
RFC4-208ENST00000447345 NFICP08651 508 aa12.96□□□□□ -0.33
RFC4-208ENST00000447345 KCNE1P15382 129 aa12.96□□□□□ -0.33
RFC4-208ENST00000447345 GARTP22102 1010 aa12.96□□□□□ -0.33
RFC4-208ENST00000447345 IGFBP6P24592 240 aaPredicted RBP12.96□□□□□ -0.33
RFC4-208ENST00000447345 GUCY2FP51841 1108 aa12.96□□□□□ -0.33
RFC4-208ENST00000447345 TFF2Q03403 129 aa12.96□□□□□ -0.33
RFC4-208ENST00000447345 JADE1Q6IE81 842 aa12.96□□□□□ -0.33
RFC4-208ENST00000447345 KANK3Q6NY19 840 aa12.96□□□□□ -0.33
RFC4-208ENST00000447345 LLGL2Q6P1M3 1020 aa12.96□□□□□ -0.33
RFC4-208ENST00000447345 TAS1R1Q7RTX1 841 aa12.96□□□□□ -0.33
RFC4-208ENST00000447345 C3orf58Q8NDZ4 430 aa12.96□□□□□ -0.33
RFC4-208ENST00000447345 HERC2P3Q9BVR0 1158 aa12.96□□□□□ -0.33
RFC4-208ENST00000447345 GPR62Q9BZJ7 368 aa12.96□□□□□ -0.33
RFC4-208ENST00000447345 TLE6Q9H808 572 aa12.96□□□□□ -0.33
RFC4-208ENST00000447345 AGPAT3Q9NRZ7 376 aa12.96□□□□□ -0.33
RFC4-208ENST00000447345 MAPK8IP1Q9UQF2 711 aa12.96□□□□□ -0.33
RFC4-208ENST00000447345 SF3B1O75533 1304 aaKnown RBP eCLIP12.95□□□□□ -0.34
RFC4-208ENST00000447345 C2orf16Q68DN1 1984 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 C2orf71A6NGG8 1288 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 I3L4J1 428 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 TGFB1I1O43294 461 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 B3GAT3O94766 335 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 CXCL14O95715 111 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 SOD2P04179 222 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 CTSAP10619 480 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 KCNA5P22460 613 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 GLUD2P49448 558 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 CYP2J2P51589 502 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 WNT7BP56706 349 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 RBM10P98175 930 aaKnown RBP12.95□□□□□ -0.34
RFC4-208ENST00000447345 PSMD2Q13200 908 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 TMEM132DQ14C87 1099 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 PTPN14Q15678 1187 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 UPP1Q16831 310 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 BMT2Q1RMZ1 405 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 PDE12Q6L8Q7 609 aaKnown RBP12.95□□□□□ -0.34
RFC4-208ENST00000447345 KIAA1841Q6NSI8 718 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 CRELD2Q6UXH1 353 aaPredicted RBP12.95□□□□□ -0.34
RFC4-208ENST00000447345 HS2ST1Q7LGA3 356 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.95□□□□□ -0.34
RFC4-208ENST00000447345 SMYD4Q8IYR2 804 aaPredicted RBP12.95□□□□□ -0.34
RFC4-208ENST00000447345 GPD1LQ8N335 351 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 HLA-CQ95604 372 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 FAM84AQ96KN4 292 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 UROC1Q96N76 676 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 PLEKHA5Q9HAU0 1116 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 NGRNQ9NPE2 291 aaKnown RBP12.95□□□□□ -0.34
RFC4-208ENST00000447345 RBAKQ9NYW8 714 aaPredicted RBP12.95□□□□□ -0.34
RFC4-208ENST00000447345 HSPBP1Q9NZL4 362 aa12.95□□□□□ -0.34
RFC4-208ENST00000447345 H3BQ06 376 aaPredicted RBP12.94□□□□□ -0.34
RFC4-208ENST00000447345 EXTL3O43909 919 aa12.94□□□□□ -0.34
RFC4-208ENST00000447345 TBX10O75333 385 aa12.94□□□□□ -0.34
RFC4-208ENST00000447345 RHOBTB3O94955 611 aa12.94□□□□□ -0.34
RFC4-208ENST00000447345 BRCC3P46736 316 aa12.94□□□□□ -0.34
RFC4-208ENST00000447345 NDUFV1P49821 464 aa12.94□□□□□ -0.34
RFC4-208ENST00000447345 UBE2HP62256 183 aa12.94□□□□□ -0.34
RFC4-208ENST00000447345 BMS1Q14692 1282 aaKnown RBP12.94□□□□□ -0.34
RFC4-208ENST00000447345 CLUL1Q15846 466 aa12.94□□□□□ -0.34
RFC4-208ENST00000447345 DUSP6Q16828 381 aa12.94□□□□□ -0.34
RFC4-208ENST00000447345 KNOP1Q1ED39 458 aaKnown RBP12.94□□□□□ -0.34
RFC4-208ENST00000447345 FAM171A1Q5VUB5 890 aa12.94□□□□□ -0.34
RFC4-208ENST00000447345 CEP57Q86XR8 500 aa12.94□□□□□ -0.34
RFC4-208ENST00000447345 CBWD2Q8IUF1 395 aa12.94□□□□□ -0.34
RFC4-208ENST00000447345 BRSK2Q8IWQ3 736 aa12.94□□□□□ -0.34
RFC4-208ENST00000447345 MRPL43Q8N983 215 aaKnown RBP12.94□□□□□ -0.34
RFC4-208ENST00000447345 UBE2ZQ9H832 354 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms