RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 ST7Q9NRC1 585 aa10.23□□□□□ -0.77
COL6A4P1-201ENST00000446690 FAM53CQ9NYF3 392 aa10.23□□□□□ -0.77
COL6A4P1-201ENST00000446690 DMGDHQ9UI17 866 aaKnown RBP10.23□□□□□ -0.77
COL6A4P1-201ENST00000446690 PCDHB4Q9Y5E5 795 aa10.23□□□□□ -0.77
COL6A4P1-201ENST00000446690 NCANO14594 1321 aa10.23□□□□□ -0.77
COL6A4P1-201ENST00000446690 ATP8B3O60423 1300 aa10.23□□□□□ -0.77
COL6A4P1-201ENST00000446690 H3BRB1 525 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 OGTO15294 1046 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 C22orf31O95567 290 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 CST3P01034 146 aaPredicted RBP10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 VTNP04004 478 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 ZBTB48P10074 688 aaPredicted RBP10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 SMPD1P17405 629 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 HUNKP57058 714 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 TFAMQ00059 246 aaKnown RBP10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 NCOA4Q13772 614 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 MESDQ14696 234 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 ZNF568Q3ZCX4 644 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 ZNF484Q5JVG2 852 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 PRAMEF19Q5SWL8 479 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 PHLDB2Q86SQ0 1253 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 RHOT2Q8IXI1 618 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 NPLOC4Q8TAT6 608 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 MTMR12Q9C0I1 747 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 TUT1Q9H6E5 874 aaKnown RBP10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 L1RE1Q9UN81 338 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 STXBP5LQ9Y2K9 1186 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 MYH10P35580 1976 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 PCNTO95613 3336 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 A0A087WZ62 844 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 ACKR2O00590 384 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 IQCF3P0C7M6 154 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 GZMAP12544 262 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 PTENP60484 403 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 MCL1Q07820 350 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 CUL2Q13617 745 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 ACVR2BQ13705 512 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 GRB14Q14449 540 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 MAP9Q49MG5 647 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 TMEM270Q6UE05 265 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 CCNI2Q6ZMN8 369 aaPredicted RBP10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 USP38Q8NB14 1042 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 OR6J1Q8NGC5 347 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 PPP1R13LQ8WUF5 828 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 CPA5Q8WXQ8 436 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 DDX1Q92499 740 aaKnown RBP10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 ZNF653Q96CK0 615 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 BTBD6Q96KE9 485 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 FAM81BQ96LP2 452 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 SCLT1Q96NL6 688 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 FDXACB1Q9BRP7 624 aaPredicted RBP10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 TINF2Q9BSI4 451 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 IMPG2Q9BZV3 1241 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 NUB1Q9Y5A7 615 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 UMODL1Q5DID0 1318 aa10.22□□□□□ -0.77
COL6A4P1-201ENST00000446690 ASAP2O43150 1006 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 PPFIA4O75335 1185 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 MYBL2P10244 700 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 MAPK4P31152 587 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 ZNF157P51786 506 aaPredicted RBP10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 NOP14P78316 857 aaKnown RBP10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 MBTD1Q05BQ5 628 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 SMC1AQ14683 1233 aaKnown RBP10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 CASP8Q14790 479 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 FAM110CQ1W6H9 321 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 EEF1DP3Q658K8 133 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 ACAD10Q6JQN1 1059 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 MPZL3Q6UWV2 235 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 TSHZ1Q6ZSZ6 1077 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 ZNF467Q7Z7K2 595 aaPredicted RBP10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 PASD1Q8IV76 773 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 BRSK2Q8IWQ3 736 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 CEP120Q8N960 986 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 NLRP7Q8WX94 980 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 HES6Q96HZ4 224 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 C16orf70Q9BSU1 422 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 NUP85Q9BW27 656 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 KATNBL1Q9H079 304 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 FZD8Q9H461 694 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 NMRK2Q9NPI5 230 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 PCDHB2Q9Y5E7 798 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 ALG6Q9Y672 507 aa10.21□□□□□ -0.77
COL6A4P1-201ENST00000446690 LRRC37A2A6NM11 1700 aa10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 RBM47A0AV96 593 aaKnown RBP10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 KRIT1O00522 736 aa10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 POLR3GO15318 223 aaPredicted RBP10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 FAM189A1O60320 539 aa10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 TMOD1P28289 359 aa10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 PHKA2P46019 1235 aa10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 MYL6P60660 151 aa10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 ZNF211Q13398 564 aaPredicted RBP10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 TRPC3Q13507 836 aa10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 KCTD19Q17RG1 926 aaPredicted RBP10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 DUOXA2Q1HG44 320 aa10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 C2CD6Q53TS8 623 aa10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 ADAT2Q7Z6V5 191 aaKnown RBP10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 WDR49Q8IV35 697 aa10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 CPB2Q96IY4 423 aa10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.21□□□□□ -0.78
COL6A4P1-201ENST00000446690 ABHD16BQ9H3Z7 469 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms