RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 PGM2L1Q6PCE3 622 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 PI16Q6UXB8 463 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 RNF19BQ6ZMZ0 732 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 ZNF574Q6ZN55 896 aaPredicted RBP2.99□□□□□ -1.93
UBBP3-201ENST00000445497 DHX32Q7L7V1 743 aaKnown RBP2.99□□□□□ -1.93
UBBP3-201ENST00000445497 NLRC3Q7RTR2 1065 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 KRT25Q7Z3Z0 450 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 ZNF804AQ7Z570 1209 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 STK32CQ86UX6 486 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 FAM160B2Q86V87 743 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 BPHLQ86WA6 291 aaPredicted RBP2.99□□□□□ -1.93
UBBP3-201ENST00000445497 METTL23Q86XA0 190 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 C12orf56Q8IXR9 622 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 KIAA0319LQ8IZA0 1049 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 FAM9CQ8IZT9 166 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 SPARTQ8N0X7 666 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 MIER2Q8N344 545 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 NIPA2Q8N8Q9 360 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 CCDC63Q8NA47 563 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 SMYD1Q8NB12 490 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 FAM13CQ8NE31 585 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 KIF18AQ8NI77 898 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 PSMA8Q8TAA3 256 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 SPATA20Q8TB22 786 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 CAGE1Q8TC20 777 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 AGR3Q8TD06 166 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 BCAS4Q8TDM0 211 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 CACTINQ8WUQ7 758 aaKnown RBP2.99□□□□□ -1.93
UBBP3-201ENST00000445497 SLC5A11Q8WWX8 675 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 TTC9Q92623 222 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 HTRA1Q92743 480 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 KAT2BQ92831 832 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 DDX17Q92841 729 aaKnown RBP2.99□□□□□ -1.93
UBBP3-201ENST00000445497 PTP4A1Q93096 173 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 KIAA1191Q96A73 305 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 INTS12Q96CB8 462 aaKnown RBP2.99□□□□□ -1.93
UBBP3-201ENST00000445497 C1GALT1C1Q96EU7 318 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 SNF8Q96H20 258 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 MAML3Q96JK9 1138 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 RPGRIP1Q96KN7 1286 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 CTAGE1Q96RT6 745 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 GAS2L1Q99501 681 aaPredicted RBP2.99□□□□□ -1.93
UBBP3-201ENST00000445497 SH3GL2Q99962 352 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 ORAI3Q9BRQ5 295 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 METTL22Q9BUU2 404 aaPredicted RBP2.99□□□□□ -1.93
UBBP3-201ENST00000445497 NFKBIZQ9BYH8 718 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 TSGA10Q9BZW7 698 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.99□□□□□ -1.93
UBBP3-201ENST00000445497 MAGEH1Q9H213 219 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 RASSF4Q9H2L5 321 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 BHMT2Q9H2M3 363 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 SUV39H2Q9H5I1 410 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 HAUS4Q9H6D7 363 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 PHAXQ9H814 394 aaKnown RBP2.99□□□□□ -1.93
UBBP3-201ENST00000445497 MMRN2Q9H8L6 949 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 ZMAT3Q9HA38 289 aaKnown RBP2.99□□□□□ -1.93
UBBP3-201ENST00000445497 KCNK13Q9HB14 408 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 ERVK-5Q9HDB9 667 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 DMRT3Q9NQL9 472 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.99□□□□□ -1.93
UBBP3-201ENST00000445497 SNTG1Q9NSN8 517 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 UCKL1Q9NWZ5 548 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 CABP1Q9NZU7 370 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 HMG20BQ9P0W2 317 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 KIF17Q9P2E2 1029 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 MALT1Q9UDY8 824 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 ADD3Q9UEY8 706 aaKnown RBP2.99□□□□□ -1.93
UBBP3-201ENST00000445497 DDX25Q9UHL0 483 aaKnown RBP2.99□□□□□ -1.93
UBBP3-201ENST00000445497 ANAPC5Q9UJX4 755 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 CLCA2Q9UQC9 943 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 CAMK2AQ9UQM7 478 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 POLHQ9Y253 713 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 CBY1Q9Y3M2 126 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 PCDHGB6Q9Y5F9 930 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 PCDHGA1Q9Y5H4 931 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 TNPO3Q9Y5L0 923 aaKnown RBP2.99□□□□□ -1.93
UBBP3-201ENST00000445497 PMF1-BGLAPU3KQ54 211 aa2.99□□□□□ -1.93
UBBP3-201ENST00000445497 RSF1Q96T23 1441 aaPredicted RBP2.99□□□□□ -1.93
UBBP3-201ENST00000445497 ATP8B3O60423 1300 aa2.98□□□□□ -1.93
UBBP3-201ENST00000445497 LOC102724428A0A0B4J2F2 783 aa2.98□□□□□ -1.93
UBBP3-201ENST00000445497 A0A0U1RQK1 487 aa2.98□□□□□ -1.93
UBBP3-201ENST00000445497 A0A1B0GUA9 196 aa2.98□□□□□ -1.93
UBBP3-201ENST00000445497 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.98□□□□□ -1.93
UBBP3-201ENST00000445497 A0A1W2PQH9 124 aa2.98□□□□□ -1.93
UBBP3-201ENST00000445497 hCG_1807616A0A1W2PRN6 198 aa2.98□□□□□ -1.93
UBBP3-201ENST00000445497 ARHGAP10A1A4S6 786 aa2.98□□□□□ -1.93
UBBP3-201ENST00000445497 ZNF320A2RRD8 509 aa2.98□□□□□ -1.93
UBBP3-201ENST00000445497 WDR91A4D1P6 747 aa2.98□□□□□ -1.93
UBBP3-201ENST00000445497 FAM83GA6ND36 823 aa2.98□□□□□ -1.93
UBBP3-201ENST00000445497 POTEMA6NI47 508 aa2.98□□□□□ -1.93
UBBP3-201ENST00000445497 A6NNZ2 444 aa2.98□□□□□ -1.93
UBBP3-201ENST00000445497 ZNF879B4DU55 563 aa2.98□□□□□ -1.93
UBBP3-201ENST00000445497 HSBP1L1C9JCN9 74 aa2.98□□□□□ -1.93
UBBP3-201ENST00000445497 H0YCG3 227 aa2.98□□□□□ -1.93
UBBP3-201ENST00000445497 DDX3XO00571 662 aaKnown RBP eCLIP2.98□□□□□ -1.93
UBBP3-201ENST00000445497 E2F3O00716 465 aa2.98□□□□□ -1.93
UBBP3-201ENST00000445497 RIMBP2O15034 1052 aa2.98□□□□□ -1.93
UBBP3-201ENST00000445497 PER2O15055 1255 aa2.98□□□□□ -1.93
UBBP3-201ENST00000445497 NPC1O15118 1278 aa2.98□□□□□ -1.93
UBBP3-201ENST00000445497 ANGPT2O15123 496 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms