RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 TMEM247A6NEH6 219 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 TBCCQ15814 346 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 TRAF7Q6Q0C0 670 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 TRAPPC11Q7Z392 1133 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 KIRREL3Q8IZU9 778 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 SLC35G2Q8TBE7 412 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 CYGBQ8WWM9 190 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 PCDHA6Q9UN73 950 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 PCDHA8Q9Y5H6 950 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 GSG1L2A8MUP6 293 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 O00370 1275 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 GH2P01242 217 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 PDHBP11177 359 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 NAB2Q15742 525 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 SPOUT1Q5T280 376 aaKnown RBP19.61■□□□□ 0.73
SHANK3-203ENST00000445220 HEATR6Q6AI08 1181 aaKnown RBP19.61■□□□□ 0.73
SHANK3-203ENST00000445220 MRGBPQ9NV56 204 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 DTNAQ9Y4J8 743 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 AP4S1Q9Y587 144 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 PPARGP37231 505 aaPredicted RBP19.61■□□□□ 0.73
SHANK3-203ENST00000445220 GALCP54803 685 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 BCAR1P56945 870 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 SLC29A2Q14542 456 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 MTERF2Q49AM1 385 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 ZNF667Q5HYK9 610 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 GJC2Q5T442 439 aaPredicted RBP19.61■□□□□ 0.73
SHANK3-203ENST00000445220 ENOSF1Q7L5Y1 443 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 ZBTB33Q86T24 672 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 CASP10Q92851 521 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 SERPINB12Q96P63 405 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 TEX12Q9BXU0 123 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 FAM129AQ9BZQ8 928 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 SEL1LQ9UBV2 794 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 A0A1B0GW55 424 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 ARHGEF37A1IGU5 675 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 USP17L5A8MUK1 530 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 DUX4L2P0CJ85 424 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 DUX4L3P0CJ86 424 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 DUX4L4P0CJ87 422 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 DUX4L5P0CJ88 424 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 DUX4L6P0CJ89 424 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 DUX4L7P0CJ90 424 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 FOXD4Q12950 439 aaPredicted RBP19.61■□□□□ 0.73
SHANK3-203ENST00000445220 P3H1Q32P28 736 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 PDXDC2PQ6P474 469 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 AGR3Q8TD06 166 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 AP5M1Q9H0R1 490 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 DUX4Q9UBX2 424 aa19.61■□□□□ 0.73
SHANK3-203ENST00000445220 MARCOQ9UEW3 520 aaPredicted RBP19.61■□□□□ 0.73
SHANK3-203ENST00000445220 ANGPT2O15123 496 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 HSPA1AP0DMV8 641 aaKnown RBP19.6■□□□□ 0.73
SHANK3-203ENST00000445220 HSPA1BP0DMV9 641 aaKnown RBP19.6■□□□□ 0.73
SHANK3-203ENST00000445220 CELF1Q92879 486 aaKnown RBP19.6■□□□□ 0.73
SHANK3-203ENST00000445220 TMA16Q96EY4 203 aaKnown RBP19.6■□□□□ 0.73
SHANK3-203ENST00000445220 CRB1P82279 1406 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 PXDNLA1KZ92 1463 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 PP2D1A8MPX8 630 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 UBE4BO95155 1302 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 GHRP10912 638 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 LVRNQ6Q4G3 990 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 ARMCX2Q7L311 632 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 ARHGAP22Q7Z5H3 698 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 DLC1Q96QB1 1528 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 EML4Q9HC35 981 aaKnown RBP19.6■□□□□ 0.73
SHANK3-203ENST00000445220 NEU2Q9Y3R4 380 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 K7ERI5 159 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 ZCCHC18P0CG32 403 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 PAX7P23759 505 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 COPB2P35606 906 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 ZNF280CQ8ND82 737 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 UVRAGQ9P2Y5 699 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 FNDC3AQ9Y2H6 1198 aaKnown RBP19.6■□□□□ 0.73
SHANK3-203ENST00000445220 TBC1D4O60343 1298 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 CDH2P19022 906 aaPredicted RBP19.6■□□□□ 0.73
SHANK3-203ENST00000445220 PRPF39Q86UA1 669 aaKnown RBP19.6■□□□□ 0.73
SHANK3-203ENST00000445220 RMDN2Q96LZ7 410 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 SIKE1Q9BRV8 207 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 CAAP1Q9H8G2 361 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 TMBIM4Q9HC24 238 aa19.6■□□□□ 0.73
SHANK3-203ENST00000445220 COPG1Q9Y678 874 aaKnown RBP19.6■□□□□ 0.73
SHANK3-203ENST00000445220 TBXAS1P24557 533 aaPredicted RBP19.59■□□□□ 0.73
SHANK3-203ENST00000445220 HOXA13P31271 388 aaPredicted RBP19.59■□□□□ 0.73
SHANK3-203ENST00000445220 TRADDQ15628 312 aa19.59■□□□□ 0.73
SHANK3-203ENST00000445220 MCPH1Q8NEM0 835 aa19.59■□□□□ 0.73
SHANK3-203ENST00000445220 BARHL2Q9NY43 387 aa19.59■□□□□ 0.73
SHANK3-203ENST00000445220 IREB2P48200 963 aaKnown RBP19.59■□□□□ 0.73
SHANK3-203ENST00000445220 ABCE1P61221 599 aaKnown RBP19.59■□□□□ 0.73
SHANK3-203ENST00000445220 FASTKD1Q53R41 847 aaKnown RBP19.59■□□□□ 0.73
SHANK3-203ENST00000445220 SLC27A3Q5K4L6 730 aa19.59■□□□□ 0.73
SHANK3-203ENST00000445220 WLSQ5T9L3 541 aa19.59■□□□□ 0.73
SHANK3-203ENST00000445220 SETD3Q86TU7 594 aaPredicted RBP19.59■□□□□ 0.73
SHANK3-203ENST00000445220 B4GALNT2Q8NHY0 566 aa19.59■□□□□ 0.73
SHANK3-203ENST00000445220 MANSC1Q9H8J5 431 aa19.59■□□□□ 0.73
SHANK3-203ENST00000445220 PCSK1NQ9UHG2 260 aa19.59■□□□□ 0.73
SHANK3-203ENST00000445220 PJA2O43164 708 aa19.59■□□□□ 0.73
SHANK3-203ENST00000445220 EIF2AK2P19525 551 aaKnown RBP19.59■□□□□ 0.73
SHANK3-203ENST00000445220 ZNF394Q53GI3 561 aa19.59■□□□□ 0.73
SHANK3-203ENST00000445220 FRA10AC1Q70Z53 315 aa19.59■□□□□ 0.73
SHANK3-203ENST00000445220 CNBD2Q96M20 576 aa19.59■□□□□ 0.73
SHANK3-203ENST00000445220 TBC1D22BQ9NU19 505 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms