RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 IL31RAQ8NI17 732 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 SYT15Q9BQS2 421 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 ETNK1Q9HBU6 452 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 PPP1R9AQ9ULJ8 1098 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 TMEM120BA0PK00 339 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 NFIBO00712 420 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 MAP3K13O43283 966 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 P4HBP07237 508 aaKnown RBP20.2■□□□□ 0.82
PMPCB-204ENST00000444457 ASNSP08243 561 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 TPBGLP0DKB5 382 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 RARGP13631 454 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 FGFR4P22455 802 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 ACVR2BQ13705 512 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 VSTM1Q6UX27 236 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 RDH13Q8NBN7 331 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 UHMK1Q8TAS1 419 aaKnown RBP20.2■□□□□ 0.82
PMPCB-204ENST00000444457 MGARPQ8TDB4 240 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 RFFLQ8WZ73 363 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 CAMKK2Q96RR4 588 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 LRMDAQ9H2I8 198 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 TXLNGQ9NUQ3 528 aa20.2■□□□□ 0.82
PMPCB-204ENST00000444457 TMEM253P0C7T8 217 aa20.19■□□□□ 0.82
PMPCB-204ENST00000444457 ACADSP16219 412 aa20.19■□□□□ 0.82
PMPCB-204ENST00000444457 ALDH3A1P30838 453 aa20.19■□□□□ 0.82
PMPCB-204ENST00000444457 PCK1P35558 622 aa20.19■□□□□ 0.82
PMPCB-204ENST00000444457 RPL21P46778 160 aaKnown RBP20.19■□□□□ 0.82
PMPCB-204ENST00000444457 PPATQ06203 517 aa20.19■□□□□ 0.82
PMPCB-204ENST00000444457 PRPF4BQ13523 1007 aaKnown RBP20.19■□□□□ 0.82
PMPCB-204ENST00000444457 CGB2Q6NT52 195 aa20.19■□□□□ 0.82
PMPCB-204ENST00000444457 TTLL6Q8N841 843 aa20.19■□□□□ 0.82
PMPCB-204ENST00000444457 FAM210AQ96ND0 272 aa20.19■□□□□ 0.82
PMPCB-204ENST00000444457 OSGEPQ9NPF4 335 aa20.19■□□□□ 0.82
PMPCB-204ENST00000444457 LARSQ9P2J5 1176 aaKnown RBP20.19■□□□□ 0.82
PMPCB-204ENST00000444457 DHX15O43143 795 aaKnown RBP20.19■□□□□ 0.82
PMPCB-204ENST00000444457 RAD23BP54727 409 aa20.19■□□□□ 0.82
PMPCB-204ENST00000444457 NIPA1Q7RTP0 329 aa20.19■□□□□ 0.82
PMPCB-204ENST00000444457 ADAT2Q7Z6V5 191 aaKnown RBP20.19■□□□□ 0.82
PMPCB-204ENST00000444457 ENDOVQ8N8Q3 282 aaKnown RBP20.19■□□□□ 0.82
PMPCB-204ENST00000444457 CLEC4DQ8WXI8 215 aa20.19■□□□□ 0.82
PMPCB-204ENST00000444457 KLHL14Q9P2G3 628 aa20.19■□□□□ 0.82
PMPCB-204ENST00000444457 PGAP2Q9UHJ9 254 aa20.19■□□□□ 0.82
PMPCB-204ENST00000444457 PCDHA3Q9Y5H8 950 aa20.19■□□□□ 0.82
PMPCB-204ENST00000444457 ZHX2Q9Y6X8 837 aa20.19■□□□□ 0.82
PMPCB-204ENST00000444457 TNIP1Q15025 636 aa20.18■□□□□ 0.82
PMPCB-204ENST00000444457 ARHGAP44Q17R89 818 aa20.18■□□□□ 0.82
PMPCB-204ENST00000444457 PHLDB3Q6NSJ2 640 aa20.18■□□□□ 0.82
PMPCB-204ENST00000444457 APBB1IPQ7Z5R6 666 aaPredicted RBP20.18■□□□□ 0.82
PMPCB-204ENST00000444457 MTMR14Q8NCE2 650 aa20.18■□□□□ 0.82
PMPCB-204ENST00000444457 LMO3Q8TAP4 145 aa20.18■□□□□ 0.82
PMPCB-204ENST00000444457 SLC35G2Q8TBE7 412 aa20.18■□□□□ 0.82
PMPCB-204ENST00000444457 RUNDC3BQ96NL0 473 aa20.18■□□□□ 0.82
PMPCB-204ENST00000444457 ZNF341Q9BYN7 854 aa20.18■□□□□ 0.82
PMPCB-204ENST00000444457 WDR35Q9P2L0 1181 aa20.18■□□□□ 0.82
PMPCB-204ENST00000444457 C2CD2Q9Y426 696 aa20.18■□□□□ 0.82
PMPCB-204ENST00000444457 IGSF9BQ9UPX0 1349 aa20.18■□□□□ 0.82
PMPCB-204ENST00000444457 PHF2O75151 1096 aa20.17■□□□□ 0.82
PMPCB-204ENST00000444457 MAPTP10636 758 aaKnown RBP20.17■□□□□ 0.82
PMPCB-204ENST00000444457 KRT13P13646 458 aa20.17■□□□□ 0.82
PMPCB-204ENST00000444457 RFX1P22670 979 aa20.17■□□□□ 0.82
PMPCB-204ENST00000444457 PEX5P50542 639 aa20.17■□□□□ 0.82
PMPCB-204ENST00000444457 KLC1Q07866 573 aa20.17■□□□□ 0.82
PMPCB-204ENST00000444457 ALCAMQ13740 583 aa20.17■□□□□ 0.82
PMPCB-204ENST00000444457 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.17■□□□□ 0.825e-6■■■□□ 17.5
PMPCB-204ENST00000444457 ASAP3Q8TDY4 903 aa20.17■□□□□ 0.82
PMPCB-204ENST00000444457 CTNNBL1Q8WYA6 563 aaPredicted RBP20.17■□□□□ 0.82
PMPCB-204ENST00000444457 ARHGEF2Q92974 986 aaKnown RBP20.17■□□□□ 0.82
PMPCB-204ENST00000444457 TMEM206Q9H813 350 aa20.17■□□□□ 0.82
PMPCB-204ENST00000444457 PIDD1Q9HB75 910 aa20.17■□□□□ 0.82
PMPCB-204ENST00000444457 PODXLO00592 558 aa20.17■□□□□ 0.82
PMPCB-204ENST00000444457 CHRNA3P32297 505 aa20.17■□□□□ 0.82
PMPCB-204ENST00000444457 RARRES1P49788 294 aa20.17■□□□□ 0.82
PMPCB-204ENST00000444457 MAP3K10Q02779 954 aa20.17■□□□□ 0.82
PMPCB-204ENST00000444457 TKFCQ3LXA3 575 aa20.17■□□□□ 0.82
PMPCB-204ENST00000444457 ECHDC2Q86YB7 292 aa20.17■□□□□ 0.82
PMPCB-204ENST00000444457 AGGF1Q8N302 714 aaeCLIP20.17■□□□□ 0.82
PMPCB-204ENST00000444457 C18orf8Q96DM3 657 aa20.17■□□□□ 0.82
PMPCB-204ENST00000444457 PDGFDQ9GZP0 370 aaPredicted RBP20.17■□□□□ 0.82
PMPCB-204ENST00000444457 PCIF1Q9H4Z3 704 aa20.17■□□□□ 0.82
PMPCB-204ENST00000444457 AGO4Q9HCK5 861 aaKnown RBP20.17■□□□□ 0.82
PMPCB-204ENST00000444457 PCYOX1Q9UHG3 505 aa20.17■□□□□ 0.82
PMPCB-204ENST00000444457 FER1L6Q2WGJ9 1857 aa20.17■□□□□ 0.82
PMPCB-204ENST00000444457 TISP43B9A030 160 aa20.16■□□□□ 0.82
PMPCB-204ENST00000444457 ATP5HO75947 161 aa20.16■□□□□ 0.82
PMPCB-204ENST00000444457 PDHA1P08559 390 aa20.16■□□□□ 0.82
PMPCB-204ENST00000444457 VCAM1P19320 739 aa20.16■□□□□ 0.82
PMPCB-204ENST00000444457 ABCB4P21439 1286 aa20.16■□□□□ 0.82
PMPCB-204ENST00000444457 TNFAIP3P21580 790 aa20.16■□□□□ 0.82
PMPCB-204ENST00000444457 DLG4P78352 724 aa20.16■□□□□ 0.82
PMPCB-204ENST00000444457 KIF22Q14807 665 aa20.16■□□□□ 0.82
PMPCB-204ENST00000444457 ZNF568Q3ZCX4 644 aa20.16■□□□□ 0.82
PMPCB-204ENST00000444457 PPP1R15BQ5SWA1 713 aa20.16■□□□□ 0.82
PMPCB-204ENST00000444457 INTS8Q75QN2 995 aaKnown RBP20.16■□□□□ 0.82
PMPCB-204ENST00000444457 UBIAD1Q9Y5Z9 338 aa20.16■□□□□ 0.82
PMPCB-204ENST00000444457 PFASO15067 1338 aa20.16■□□□□ 0.82
PMPCB-204ENST00000444457 EMSYQ7Z589 1322 aa20.16■□□□□ 0.82
PMPCB-204ENST00000444457 LRRN2O75325 713 aa20.16■□□□□ 0.82
PMPCB-204ENST00000444457 CREB1P16220 341 aa20.16■□□□□ 0.82
PMPCB-204ENST00000444457 GM2AP17900 193 aa20.16■□□□□ 0.82
PMPCB-204ENST00000444457 SP100P23497 879 aaPredicted RBP20.16■□□□□ 0.82
PMPCB-204ENST00000444457 GHRHRQ02643 423 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms