RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 MAPK4P31152 587 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 TPH2Q8IWU9 490 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 TMEM120AQ9BXJ8 343 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 PLGRKTQ9HBL7 147 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 SAP30BPQ9UHR5 308 aaKnown RBP5.31□□□□□ -1.56
HERC1-201ENST00000443617 MYH7BA7E2Y1 1941 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 CLIC2O15247 247 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 ITGA2BP08514 1039 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 PSMC2P35998 433 aaKnown RBP5.31□□□□□ -1.56
HERC1-201ENST00000443617 ARL4CP56559 192 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 FOLH1Q04609 750 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 GIT2Q14161 759 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 LPIN1Q14693 890 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 TBCCQ15814 346 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 HLFQ16534 295 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 OTOAQ7RTW8 1153 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 NRG4Q8WWG1 115 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 MRPS26Q9BYN8 205 aaKnown RBP5.31□□□□□ -1.56
HERC1-201ENST00000443617 NINJ2Q9NZG7 142 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 BARX2Q9UMQ3 279 aaPredicted RBP5.31□□□□□ -1.56
HERC1-201ENST00000443617 T-ENOLP0DO92 83 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 CPA2P48052 419 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 MMTAG2Q9BU76 263 aaKnown RBP5.31□□□□□ -1.56
HERC1-201ENST00000443617 MRPL1Q9BYD6 325 aaKnown RBP5.31□□□□□ -1.56
HERC1-201ENST00000443617 ARMCX1Q9P291 453 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 ASMTLO95671 621 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 FXR2P51116 673 aaKnown RBP eCLIP5.31□□□□□ -1.565e-7■■■■■ 31.1
HERC1-201ENST00000443617 FOXB2Q5VYV0 432 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 IZUMO3Q5VZ72 239 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 NLRP10Q86W26 655 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 HIPK4Q8NE63 616 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 PTTG2Q9NZH5 202 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 PNMA6FA0A0J9YX94 578 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 TRMUO75648 421 aaKnown RBP5.31□□□□□ -1.56
HERC1-201ENST00000443617 MLH1P40692 756 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 GYG1P46976 350 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 RABGAP1LQ5R372 815 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 NET1Q7Z628 596 aaPredicted RBP5.31□□□□□ -1.56
HERC1-201ENST00000443617 PALM2Q8IXS6 379 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 CCDC124Q96CT7 223 aaKnown RBP5.31□□□□□ -1.56
HERC1-201ENST00000443617 THAP2Q9H0W7 228 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 USP17L5A8MUK1 530 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 FMO5P49326 533 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 NR1H2P55055 460 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 RGS9BPQ6ZS82 235 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 ARMCX6Q7L4S7 300 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 PRUNE1Q86TP1 453 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 VTI1AQ96AJ9 217 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 NUF2Q9BZD4 464 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 PDXKO00764 312 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 TBX10O75333 385 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 NEK3P51956 506 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 PABPC1LQ4VXU2 614 aaKnown RBP5.3□□□□□ -1.56
HERC1-201ENST00000443617 ZNF746Q6NUN9 644 aaPredicted RBP5.3□□□□□ -1.56
HERC1-201ENST00000443617 BCAP29Q9UHQ4 241 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 LNPEPQ9UIQ6 1025 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 PCDHA12Q9UN75 941 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 INPP5FQ9Y2H2 1132 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 NEU2Q9Y3R4 380 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 POTEMA6NI47 508 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 PDE8AO60658 829 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 HSPA1LP34931 641 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 ZCCHC9Q8N567 271 aaKnown RBP5.3□□□□□ -1.56
HERC1-201ENST00000443617 PYROXD1Q8WU10 500 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 OLFML3Q9NRN5 406 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 AK5Q9Y6K8 562 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 WDR4P57081 412 aaKnown RBP5.3□□□□□ -1.56
HERC1-201ENST00000443617 C1orf228Q6PIY5 440 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 TRIM67Q6ZTA4 783 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 SFR1Q86XK3 245 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 GID8Q9NWU2 228 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 RAB20Q9NX57 234 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 POTECB2RU33 542 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 CBFA2T3O75081 653 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 PDK4Q16654 411 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 ACSBG2Q5FVE4 666 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 CATSPER1Q8NEC5 780 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 ZNF398Q8TD17 642 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 SLC26A7Q8TE54 656 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 DCLK3Q9C098 648 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 CEP170BQ9Y4F5 1589 aaPredicted RBP5.3□□□□□ -1.56
HERC1-201ENST00000443617 CCDC195A0A1B0GUA6 201 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 ABHD2P08910 425 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 USP17L8P0C7I0 530 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 RFX1P22670 979 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 GEMIN4P57678 1058 aaKnown RBP5.3□□□□□ -1.56
HERC1-201ENST00000443617 SLC25A41Q8N5S1 370 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 POP1Q99575 1024 aaKnown RBP5.3□□□□□ -1.56
HERC1-201ENST00000443617 CCT7Q99832 543 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 OSGEPQ9NPF4 335 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 DCP1AQ9NPI6 582 aaPredicted RBP5.3□□□□□ -1.56
HERC1-201ENST00000443617 FOXN3O00409 490 aaPredicted RBP5.3□□□□□ -1.56
HERC1-201ENST00000443617 BBS9Q3SYG4 887 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 PRR16Q569H4 304 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 SLFN12Q8IYM2 578 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 VPS50Q96JG6 964 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 EYA3Q99504 573 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 ZNF510Q9Y2H8 683 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 H3BRJ5 948 aa5.3□□□□□ -1.56
HERC1-201ENST00000443617 PABPC4Q13310 644 aaKnown RBP eCLIP5.3□□□□□ -1.563e-6■□□□□ 9
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms