RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 ADRA1DP25100 572 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 RFC4P35249 363 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 EPHB1P54762 984 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 GIT2Q14161 759 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 MAP7Q14244 749 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 LIN52Q52LA3 116 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 C10orf76Q5T2E6 689 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 LPCAT4Q643R3 524 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 PHLDB3Q6NSJ2 640 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 BTNL9Q6UXG8 535 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 RASSF3Q86WH2 238 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 LRRC6Q86X45 466 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 DGKHQ86XP1 1220 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 LRRC47Q8N1G4 583 aaKnown RBP7.99□□□□□ -1.13
HDAC9-214ENST00000441542 SYT2Q8N9I0 419 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-214ENST00000441542 PIP4K2CQ8TBX8 421 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 SEC14L1Q92503 715 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 SLC5A5Q92911 643 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 PTPRN2Q92932 1015 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 DNAJC19Q96DA6 116 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 RBM17Q96I25 401 aaKnown RBP7.99□□□□□ -1.13
HDAC9-214ENST00000441542 SERPINB12Q96P63 405 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 CDCA7Q9BWT1 371 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-214ENST00000441542 EBF3Q9H4W6 596 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 KRT82Q9NSB4 513 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 TMOD3Q9NYL9 352 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 STK17AQ9UEE5 414 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 PCDHA12Q9UN75 941 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 AFDNP55196 1824 aaKnown RBP7.99□□□□□ -1.13
HDAC9-214ENST00000441542 ECM29Q5VYK3 1845 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 CCDC195A0A1B0GUA6 201 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 B2RBV5 119 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 IPO5O00410 1097 aaKnown RBP7.99□□□□□ -1.13
HDAC9-214ENST00000441542 RNASEH1O60930 286 aaKnown RBP7.99□□□□□ -1.13
HDAC9-214ENST00000441542 HARSP12081 509 aaKnown RBP7.99□□□□□ -1.13
HDAC9-214ENST00000441542 GNA11P29992 359 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 SLC16A2P36021 539 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 HIRAP54198 1017 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-214ENST00000441542 PSMC6P62333 389 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 MECOMQ03112 1051 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 COG2Q14746 738 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 EPC2Q52LR7 807 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 RGS9BPQ6ZS82 235 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 ILDR2Q71H61 639 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 CROCCP2Q86T23 111 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 ZBTB46Q86UZ6 589 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 ST13P4Q8IZP2 240 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-214ENST00000441542 PROM2Q8N271 834 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 FBXO27Q8NI29 283 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 PYDC1Q8WXC3 89 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 TTC17Q96AE7 1141 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 ASCC2Q9H1I8 757 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-214ENST00000441542 DNAJC18Q9H819 358 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 PDP2Q9P2J9 529 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 PACSIN3Q9UKS6 424 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 NID2Q14112 1375 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 BOLA2-SMG1P6H3BVE0 249 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 FOXN3O00409 490 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-214ENST00000441542 TRPA1O75762 1119 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 ATP5HO75947 161 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 IFNB1P01574 187 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 NR3C1P04150 777 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 TROVE2P10155 538 aaKnown RBP eCLIP7.99□□□□□ -1.13
HDAC9-214ENST00000441542 IMPDH2P12268 514 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 VAV1P15498 845 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 SOX5P35711 763 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 NOP14P78316 857 aaKnown RBP7.99□□□□□ -1.13
HDAC9-214ENST00000441542 MPP3Q13368 585 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 PLEKHG4Q58EX7 1191 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 C1orf146Q5VVC0 180 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 LLGL2Q6P1M3 1020 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 CLNKQ7Z7G1 428 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 SLFN11Q7Z7L1 901 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 DZIP1Q86YF9 867 aaKnown RBP7.99□□□□□ -1.13
HDAC9-214ENST00000441542 SLC13A5Q86YT5 568 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-214ENST00000441542 MIPOL1Q8TD10 442 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 VTI1AQ96AJ9 217 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 CEP63Q96MT8 703 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 NDE1Q9NXR1 346 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 DDX25Q9UHL0 483 aaKnown RBP7.99□□□□□ -1.13
HDAC9-214ENST00000441542 FBXO9Q9UK97 447 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-214ENST00000441542 MROH5Q6ZUA9 1318 aa7.99□□□□□ -1.13
HDAC9-214ENST00000441542 ATRNO75882 1429 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 LAD1O00515 517 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 GSC2O15499 205 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 BAG3O95817 575 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 ZSCAN5DPP0CG00 497 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 FGFR1P11362 822 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 LMNB1P20700 586 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 MAGEA8P43361 318 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 ATXN3P54252 364 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-214ENST00000441542 PDE1CQ14123 709 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-214ENST00000441542 FASTKD3Q14CZ7 662 aaKnown RBP7.98□□□□□ -1.13
HDAC9-214ENST00000441542 MAPK6Q16659 721 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 GRAMD1BQ3KR37 738 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 RNF168Q8IYW5 571 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-214ENST00000441542 WDR66Q8TBY9 1149 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 ZNF384Q8TF68 577 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 KAT5Q92993 513 aa7.98□□□□□ -1.13
HDAC9-214ENST00000441542 ART4Q93070 314 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms