RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 OR56B2PQ8NGI1 322 aa11.27□□□□□ -0.6
SYNE2-206ENST00000441438 LEO1Q8WVC0 666 aaPredicted RBP11.27□□□□□ -0.6
SYNE2-206ENST00000441438 KRT35Q92764 455 aa11.27□□□□□ -0.6
SYNE2-206ENST00000441438 TMIGD2Q96BF3 282 aa11.27□□□□□ -0.6
SYNE2-206ENST00000441438 DCTPP1Q9H773 170 aa11.27□□□□□ -0.6
SYNE2-206ENST00000441438 A1CFQ9NQ94 594 aaKnown RBP11.27□□□□□ -0.6
SYNE2-206ENST00000441438 COL5A2P05997 1499 aaPredicted RBP11.27□□□□□ -0.6
SYNE2-206ENST00000441438 A0A1W2PPH5 198 aa11.27□□□□□ -0.61
SYNE2-206ENST00000441438 FRMD3A2A2Y4 597 aa11.27□□□□□ -0.61
SYNE2-206ENST00000441438 IL10P22301 178 aa11.27□□□□□ -0.61
SYNE2-206ENST00000441438 MCM3P25205 808 aa11.27□□□□□ -0.61
SYNE2-206ENST00000441438 ADAM15Q13444 863 aa11.27□□□□□ -0.61
SYNE2-206ENST00000441438 HSP90AA5PQ58FG0 334 aa11.27□□□□□ -0.61
SYNE2-206ENST00000441438 SLC22A9Q8IVM8 553 aa11.27□□□□□ -0.61
SYNE2-206ENST00000441438 CPLX3Q8WVH0 158 aa11.27□□□□□ -0.61
SYNE2-206ENST00000441438 GCOM2Q9BZD3 368 aaPredicted RBP11.27□□□□□ -0.61
SYNE2-206ENST00000441438 UPF3BQ9BZI7 483 aaKnown RBP11.27□□□□□ -0.61
SYNE2-206ENST00000441438 NMRK1Q9NWW6 199 aa11.27□□□□□ -0.61
SYNE2-206ENST00000441438 EHD3Q9NZN3 535 aa11.27□□□□□ -0.61
SYNE2-206ENST00000441438 C5P01031 1676 aa11.27□□□□□ -0.61
SYNE2-206ENST00000441438 SPDYE3A6NKU9 549 aa11.27□□□□□ -0.61
SYNE2-206ENST00000441438 FZD6O60353 706 aa11.27□□□□□ -0.61
SYNE2-206ENST00000441438 FBXO21O94952 628 aa11.27□□□□□ -0.61
SYNE2-206ENST00000441438 PCSK7Q16549 785 aa11.27□□□□□ -0.61
SYNE2-206ENST00000441438 LRRC23Q53EV4 343 aaPredicted RBP11.27□□□□□ -0.61
SYNE2-206ENST00000441438 ALG1LQ6GMV1 187 aa11.27□□□□□ -0.61
SYNE2-206ENST00000441438 GATAD2AQ86YP4 633 aa11.27□□□□□ -0.61
SYNE2-206ENST00000441438 WDR49Q8IV35 697 aa11.27□□□□□ -0.61
SYNE2-206ENST00000441438 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.27□□□□□ -0.61
SYNE2-206ENST00000441438 AMACRQ9UHK6 382 aa11.27□□□□□ -0.61
SYNE2-206ENST00000441438 DDX19BQ9UMR2 479 aa11.27□□□□□ -0.61
SYNE2-206ENST00000441438 DNM3Q9UQ16 869 aa11.27□□□□□ -0.61
SYNE2-206ENST00000441438 MAP2P11137 1827 aaKnown RBP11.27□□□□□ -0.61
SYNE2-206ENST00000441438 TARSL2A2RTX5 802 aaKnown RBP11.26□□□□□ -0.61
SYNE2-206ENST00000441438 A6NLC8 198 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 TMEM232C9JQI7 657 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 SULT1B1O43704 296 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 RHCEP18577 417 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 RFC4P35249 363 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 CETN2P41208 172 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 RHDQ02161 417 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 KDSRQ06136 332 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 BMPR2Q13873 1038 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 DOC2AQ14183 400 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 TLR1Q15399 786 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 Q3ZCU0 254 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 KRT74Q7RTS7 529 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 P3H2Q8IVL5 708 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 GDAP1Q8TB36 358 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 ADAM32Q8TC27 787 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 EAF1Q96JC9 268 aaPredicted RBP11.26□□□□□ -0.61
SYNE2-206ENST00000441438 C19orf43Q9BQ61 176 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 DHRS4Q9BTZ2 278 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 EHMT1Q9H9B1 1298 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 KIF9Q9HAQ2 790 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 HESX1Q9UBX0 185 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 LRP5O75197 1615 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 RGPD5Q99666 1765 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 M0R2N6 131 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 TLR3O15455 904 aaKnown RBP11.26□□□□□ -0.61
SYNE2-206ENST00000441438 STARD3NLO95772 234 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 GCKP35557 465 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 PKDCCQ504Y2 493 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 AGMOQ6ZNB7 445 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 FAM178BQ8IXR5 827 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 RUBCNQ92622 972 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 NUDCD1Q96RS6 583 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 UNKQ9C0B0 810 aaKnown RBP11.26□□□□□ -0.61
SYNE2-206ENST00000441438 GHITMQ9H3K2 345 aa11.26□□□□□ -0.61
SYNE2-206ENST00000441438 GOLGA8MH3BSY2 632 aa11.25□□□□□ -0.61
SYNE2-206ENST00000441438 TACC1O75410 805 aa11.25□□□□□ -0.61
SYNE2-206ENST00000441438 MNX1P50219 401 aaPredicted RBP11.25□□□□□ -0.61
SYNE2-206ENST00000441438 ALG11Q2TAA5 492 aa11.25□□□□□ -0.61
SYNE2-206ENST00000441438 CREG2Q8IUH2 290 aa11.25□□□□□ -0.61
SYNE2-206ENST00000441438 REXO1Q8N1G1 1221 aaKnown RBP11.25□□□□□ -0.61
SYNE2-206ENST00000441438 TSPYL6Q8N831 410 aa11.25□□□□□ -0.61
SYNE2-206ENST00000441438 SHDQ96IW2 340 aa11.25□□□□□ -0.61
SYNE2-206ENST00000441438 NT5C3AQ9H0P0 336 aa11.25□□□□□ -0.61
SYNE2-206ENST00000441438 AKAP7Q9P0M2 348 aaPredicted RBP11.25□□□□□ -0.61
SYNE2-206ENST00000441438 UBR2Q8IWV8 1755 aa11.25□□□□□ -0.61
SYNE2-206ENST00000441438 ZEB2O60315 1214 aa11.25□□□□□ -0.61
SYNE2-206ENST00000441438 FLOT1O75955 427 aa11.25□□□□□ -0.61
SYNE2-206ENST00000441438 IDO1P14902 403 aa11.25□□□□□ -0.61
SYNE2-206ENST00000441438 PSMC2P35998 433 aaKnown RBP11.25□□□□□ -0.61
SYNE2-206ENST00000441438 TMPRSS15P98073 1019 aa11.25□□□□□ -0.61
SYNE2-206ENST00000441438 TRAP1Q12931 704 aaKnown RBP11.25□□□□□ -0.61
SYNE2-206ENST00000441438 BMP2KLQ5H9B9 411 aa11.25□□□□□ -0.61
SYNE2-206ENST00000441438 NLRC3Q7RTR2 1065 aa11.25□□□□□ -0.61
SYNE2-206ENST00000441438 ZNF598Q86UK7 904 aaKnown RBP11.25□□□□□ -0.61
SYNE2-206ENST00000441438 USP13Q92995 863 aaPredicted RBP11.25□□□□□ -0.61
SYNE2-206ENST00000441438 PPP1R16BQ96T49 567 aa11.25□□□□□ -0.61
SYNE2-206ENST00000441438 TBCBQ99426 244 aa11.25□□□□□ -0.61
SYNE2-206ENST00000441438 SCPEP1Q9HB40 452 aa11.25□□□□□ -0.61
SYNE2-206ENST00000441438 TBCCD1Q9NVR7 557 aa11.25□□□□□ -0.61
SYNE2-206ENST00000441438 DENND2AQ9ULE3 1009 aa11.25□□□□□ -0.61
SYNE2-206ENST00000441438 ZKSCAN5Q9Y2L8 839 aa11.25□□□□□ -0.61
SYNE2-206ENST00000441438 BRWD3Q6RI45 1802 aa11.25□□□□□ -0.61
SYNE2-206ENST00000441438 GOLGA6L10A6NI86 522 aa11.24□□□□□ -0.61
SYNE2-206ENST00000441438 ST8SIA5O15466 376 aa11.24□□□□□ -0.61
SYNE2-206ENST00000441438 ERLIN2O94905 339 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms