RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 SESTD1Q86VW0 696 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 PRELID2Q8N945 189 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 CAMKK2Q96RR4 588 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 SPATA16Q9BXB7 569 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 ZHX3Q9H4I2 956 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 NYAP2Q9P242 653 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 PHTF1Q9UMS5 762 aa17.88■□□□□ 0.45
PMS1-213ENST00000441310 NRXN2Q9P2S2 1712 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 hCG_1984214I3L0E3 225 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 GFPT2O94808 682 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 YARSP54577 528 aaKnown RBP17.87■□□□□ 0.45
PMS1-213ENST00000441310 OCRLQ01968 901 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 KPNB1Q14974 876 aaKnown RBP17.87■□□□□ 0.45
PMS1-213ENST00000441310 ZRSR2Q15696 482 aaKnown RBP17.87■□□□□ 0.45
PMS1-213ENST00000441310 PRR16Q569H4 304 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 ZNF365Q70YC5 407 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 HS2ST1Q7LGA3 356 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 ZNF713Q8N859 430 aaPredicted RBP17.87■□□□□ 0.45
PMS1-213ENST00000441310 SERPINB12Q96P63 405 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 POP1Q99575 1024 aaKnown RBP17.87■□□□□ 0.45
PMS1-213ENST00000441310 TAOK3Q9H2K8 898 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 RGS17Q9UGC6 210 aaPredicted RBP17.87■□□□□ 0.45
PMS1-213ENST00000441310 E9PMD0 336 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 TBX10O75333 385 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 ABCD1P33897 745 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 NEK3P51956 506 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 CDR2Q01850 454 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 FAM26FQ5R3K3 315 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 TATDN1Q6P1N9 297 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 AZIN2Q96A70 460 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 ANO3Q9BYT9 981 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 SEPT11Q9NVA2 429 aaKnown RBP17.87■□□□□ 0.45
PMS1-213ENST00000441310 ETNK2Q9NVF9 386 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 MYO3BQ8WXR4 1341 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 FOCADQ5VW36 1801 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 EYA4O95677 639 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 DPEP1P16444 411 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 CTTNQ14247 550 aaKnown RBP17.87■□□□□ 0.45
PMS1-213ENST00000441310 ACSBG2Q5FVE4 666 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 DCAF17Q5H9S7 520 aaPredicted RBP17.87■□□□□ 0.45
PMS1-213ENST00000441310 RFX8Q6ZV50 586 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 GLYCTKQ8IVS8 523 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 TRIM42Q8IWZ5 723 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 KBTBD2Q8IY47 623 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 TTLL6Q8N841 843 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 MIPEPQ99797 713 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 HDAC9Q9UKV0 1011 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 MROH7Q68CQ1 1323 aa17.87■□□□□ 0.45
PMS1-213ENST00000441310 MAP3K7O43318 606 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 SPAG7O75391 227 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 LYNP07948 512 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 CLK2P49760 499 aaKnown RBP17.86■□□□□ 0.45
PMS1-213ENST00000441310 RTP1P59025 263 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 BPIFB4P59827 614 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 KYNUQ16719 465 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 TCERG1LQ5VWI1 586 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 SPIRE2Q8WWL2 714 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 RAB34Q9BZG1 259 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 TMEM39BQ9GZU3 492 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 LNPEPQ9UIQ6 1025 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 KIAA1024Q9UPX6 916 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 A0A0A6YYK5 440 aaPredicted RBP17.86■□□□□ 0.45
PMS1-213ENST00000441310 DCTN3O75935 186 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 PTPN4P29074 926 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 CHRNA3P32297 505 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 MARCKSL1P49006 195 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 FXR2P51116 673 aaKnown RBP eCLIP17.86■□□□□ 0.45
PMS1-213ENST00000441310 UBXN2AP68543 259 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 IL9RQ01113 521 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 SLC34A1Q06495 639 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 CALCOCO2Q13137 446 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 DLGAP5Q15398 846 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 ZDHHC14Q8IZN3 488 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 CYP2W1Q8TAV3 490 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 MIPOL1Q8TD10 442 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 TMOD2Q9NZR1 351 aa17.86■□□□□ 0.45
PMS1-213ENST00000441310 PODXLO00592 558 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 RAD54LQ92698 747 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 MKL1Q969V6 931 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 ARHGEF26Q96DR7 871 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 HIC2Q96JB3 615 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 TUBGCP5Q96RT8 1024 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 TMCO1Q9UM00 188 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 POTEB3A0JP26 581 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 POTECB2RU33 542 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 MEIS1O00470 390 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 MEIS2O14770 477 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 BMP3P12645 472 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 VCAM1P19320 739 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 MTA1Q13330 715 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 CCDC174Q6PII3 467 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 POTEBQ6S5H4 581 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 FBXO11Q86XK2 927 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 OGFOD1Q8N543 542 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 LNX1Q8TBB1 728 aaPredicted RBP17.85■□□□□ 0.45
PMS1-213ENST00000441310 CTNNBL1Q8WYA6 563 aaPredicted RBP17.85■□□□□ 0.45
PMS1-213ENST00000441310 CEP63Q96MT8 703 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 CADM1Q9BY67 442 aaKnown RBP17.85■□□□□ 0.45
PMS1-213ENST00000441310 STK17AQ9UEE5 414 aa17.85■□□□□ 0.45
PMS1-213ENST00000441310 ZFP69BQ9UJL9 534 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms