RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 ADD3Q9UEY8 706 aaKnown RBP5.47□□□□□ -1.53
PTPN4-206ENST00000441089 GTF2IRD1Q9UHL9 959 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 FBXL21Q9UKT6 434 aa5.47□□□□□ -1.53
PTPN4-206ENST00000441089 KIAA1217Q5T5P2 1943 aa5.46□□□□□ -1.53
PTPN4-206ENST00000441089 LAMA5O15230 3695 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 DOPEY1Q5JWR5 2465 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 KLF18A0A0U1RQI7 1052 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 RBM47A0AV96 593 aaKnown RBP5.46□□□□□ -1.54
PTPN4-206ENST00000441089 TSPY2A6NKD2 308 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 RSPH10B2B2RC85 870 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 C2CD4DB7Z1M9 353 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 PFKFB2O60825 505 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 CTDNEP1O95476 244 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 SLC3A2P08195 630 aaKnown RBP5.46□□□□□ -1.54
PTPN4-206ENST00000441089 LINC00271P0C7V0 271 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 RSPH10BP0C881 870 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 EEF2P13639 858 aaKnown RBP5.46□□□□□ -1.54
PTPN4-206ENST00000441089 RXRAP19793 462 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 LIFRP42702 1097 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 UBE3AQ05086 875 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 STK3Q13188 491 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 BTG3Q14201 252 aaPredicted RBP5.46□□□□□ -1.54
PTPN4-206ENST00000441089 WTAPQ15007 396 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 ANKRD1Q15327 319 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 ZNF423Q2M1K9 1284 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 ZNF528Q3MIS6 628 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 TMEM63BQ5T3F8 832 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 TMEM184AQ6ZMB5 413 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 RUFY4Q6ZNE9 571 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 RASGRP2Q7LDG7 609 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 C1orf210Q8IVY1 113 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 AMOTL1Q8IY63 956 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 C7orf31Q8N865 590 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 TDRD5Q8NAT2 981 aaKnown RBP5.46□□□□□ -1.54
PTPN4-206ENST00000441089 SPPL3Q8TCT6 385 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 MICAL1Q8TDZ2 1067 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 SCFD2Q8WU76 684 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 PPP1R13LQ8WUF5 828 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 GTF3C6Q969F1 213 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 ZSCAN31Q96LW9 406 aaPredicted RBP5.46□□□□□ -1.54
PTPN4-206ENST00000441089 CITED4Q96RK1 184 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 FAM129BQ96TA1 746 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 MPHOSPH6Q99547 160 aaKnown RBP5.46□□□□□ -1.54
PTPN4-206ENST00000441089 ARID3AQ99856 593 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 MTA3Q9BTC8 594 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 S1PR5Q9H228 398 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 GSX1Q9H4S2 264 aaPredicted RBP5.46□□□□□ -1.54
PTPN4-206ENST00000441089 MKNK2Q9HBH9 465 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 NCOA5Q9HCD5 579 aaKnown RBP5.46□□□□□ -1.54
PTPN4-206ENST00000441089 ERVK-5Q9HDB9 667 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 HOMER2Q9NSB8 354 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 TCP11L1Q9NUJ3 509 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 WDFY3Q8IZQ1 3526 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 ADAMTS20P59510 1910 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 ABCA12Q86UK0 2595 aa5.46□□□□□ -1.54
PTPN4-206ENST00000441089 NID2Q14112 1375 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 DOCK8Q8NF50 2099 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-206ENST00000441089 GOLGA8BA8MQT2 603 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 TAF4O00268 1085 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 FOXD2O60548 495 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-206ENST00000441089 JAK2O60674 1132 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 ITGB1P05556 798 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 ASGR2P07307 311 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 MMP3P08254 477 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 TSPY3P0CV98 308 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 TSPY8P0CW00 308 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 DNAJB1P25685 340 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 MAOBP27338 520 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 CFPP27918 469 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 TECP42680 631 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 MTHFRP42898 656 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 NT5C2P49902 561 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 CCT2P78371 535 aaKnown RBP5.45□□□□□ -1.54
PTPN4-206ENST00000441089 FGD1P98174 961 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 ITIH3Q06033 890 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 TDGQ13569 410 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 DUSP6Q16828 381 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 SLC35G1Q2M3R5 365 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 TRIM71Q2Q1W2 868 aaKnown RBP5.45□□□□□ -1.54
PTPN4-206ENST00000441089 ANKRD54Q6NXT1 300 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 OGFOD3Q6PK18 319 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 APOA5Q6Q788 366 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 UNQ6494/PRO21346Q6UXR6 183 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 DYMQ7RTS9 669 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 DGKHQ86XP1 1220 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 CCNJLQ8IV13 435 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 ZNF654Q8IZM8 581 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 ZNF444Q8N0Y2 327 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-206ENST00000441089 LRRC47Q8N1G4 583 aaKnown RBP5.45□□□□□ -1.54
PTPN4-206ENST00000441089 NSUN7Q8NE18 718 aaKnown RBP5.45□□□□□ -1.54
PTPN4-206ENST00000441089 RASGRP4Q8TDF6 673 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 POF1BQ8WVV4 589 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 ATRIPQ8WXE1 791 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 ZNF274Q96GC6 653 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-206ENST00000441089 CEP95Q96GE4 821 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 TMEM47Q9BQJ4 181 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 TRIM56Q9BRZ2 755 aaKnown RBP5.45□□□□□ -1.54
PTPN4-206ENST00000441089 UBAC1Q9BSL1 405 aa5.45□□□□□ -1.54
PTPN4-206ENST00000441089 KATNAL1Q9BW62 490 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms