RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 CACNB1Q02641 598 aaPredicted RBP12.7□□□□□ -0.38
LTBR-203ENST00000441074 STRN3Q13033 797 aa12.7□□□□□ -0.38
LTBR-203ENST00000441074 PRKG1Q13976 671 aa12.7□□□□□ -0.38
LTBR-203ENST00000441074 PPP1R15BQ5SWA1 713 aa12.7□□□□□ -0.38
LTBR-203ENST00000441074 AADACL2Q6P093 401 aa12.7□□□□□ -0.38
LTBR-203ENST00000441074 POTEBQ6S5H4 581 aa12.7□□□□□ -0.38
LTBR-203ENST00000441074 CCDC25Q86WR0 208 aa12.7□□□□□ -0.38
LTBR-203ENST00000441074 ZDHHC14Q8IZN3 488 aa12.7□□□□□ -0.38
LTBR-203ENST00000441074 RBBP8NLQ8NC74 664 aaPredicted RBP12.7□□□□□ -0.38
LTBR-203ENST00000441074 SLC35C1Q96A29 364 aa12.7□□□□□ -0.38
LTBR-203ENST00000441074 MBOAT7Q96N66 472 aa12.7□□□□□ -0.38
LTBR-203ENST00000441074 DDX23Q9BUQ8 820 aaKnown RBP12.7□□□□□ -0.38
LTBR-203ENST00000441074 STK33Q9BYT3 514 aa12.7□□□□□ -0.38
LTBR-203ENST00000441074 PITPNM3Q9BZ71 974 aa12.7□□□□□ -0.38
LTBR-203ENST00000441074 DEFB129Q9H1M3 183 aa12.7□□□□□ -0.38
LTBR-203ENST00000441074 PIDD1Q9HB75 910 aa12.7□□□□□ -0.38
LTBR-203ENST00000441074 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.7□□□□□ -0.38
LTBR-203ENST00000441074 RGL1Q9NZL6 768 aa12.7□□□□□ -0.38
LTBR-203ENST00000441074 HGSO14964 777 aaPredicted RBP12.69□□□□□ -0.38
LTBR-203ENST00000441074 RPL13P26373 211 aaKnown RBP12.69□□□□□ -0.38
LTBR-203ENST00000441074 CALCOCO2Q13137 446 aa12.69□□□□□ -0.38
LTBR-203ENST00000441074 TCERG1LQ5VWI1 586 aa12.69□□□□□ -0.38
LTBR-203ENST00000441074 C11orf63Q6NUN7 778 aa12.69□□□□□ -0.38
LTBR-203ENST00000441074 PPP1R21Q6ZMI0 780 aa12.69□□□□□ -0.38
LTBR-203ENST00000441074 RHOT2Q8IXI1 618 aa12.69□□□□□ -0.38
LTBR-203ENST00000441074 CCDC105Q8IYK2 499 aa12.69□□□□□ -0.38
LTBR-203ENST00000441074 FAM136AQ96C01 138 aa12.69□□□□□ -0.38
LTBR-203ENST00000441074 RPS6KC1Q96S38 1066 aa12.69□□□□□ -0.38
LTBR-203ENST00000441074 NKIRAS1Q9NYS0 192 aa12.69□□□□□ -0.38
LTBR-203ENST00000441074 CTTNBP2NLQ9P2B4 639 aa12.69□□□□□ -0.38
LTBR-203ENST00000441074 COG5Q9UP83 839 aa12.69□□□□□ -0.38
LTBR-203ENST00000441074 STARD13Q9Y3M8 1113 aa12.69□□□□□ -0.38
LTBR-203ENST00000441074 TBX3O15119 743 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 MAPK13O15264 365 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 ACSL3O95573 720 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 BMP3P12645 472 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 RPS12P25398 132 aaKnown RBP12.68□□□□□ -0.38
LTBR-203ENST00000441074 HOXA13P31271 388 aaPredicted RBP12.68□□□□□ -0.38
LTBR-203ENST00000441074 CAP2P40123 477 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 RASSF2P50749 326 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 CASP5P51878 434 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 ZNF280AP59817 542 aaPredicted RBP12.68□□□□□ -0.38
LTBR-203ENST00000441074 AP3B2Q13367 1082 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 BMT2Q1RMZ1 405 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 ARSHQ5FYA8 562 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 SEL1L2Q5TEA6 688 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 ANGEL2Q5VTE6 544 aaKnown RBP12.68□□□□□ -0.38
LTBR-203ENST00000441074 OR52E8Q6IFG1 317 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 FAM43BQ6ZT52 329 aaPredicted RBP12.68□□□□□ -0.38
LTBR-203ENST00000441074 EPM2AIP1Q7L775 607 aaPredicted RBP12.68□□□□□ -0.38
LTBR-203ENST00000441074 LONP2Q86WA8 852 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 MTMR14Q8NCE2 650 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 ZSWIM1Q9BR11 485 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 THAP2Q9H0W7 228 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 AAASQ9NRG9 546 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 WHRNQ9P202 907 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 USP20Q9Y2K6 914 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 USH1CQ9Y6N9 552 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 PSME4Q14997 1843 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 TRAFD1O14545 582 aaPredicted RBP12.68□□□□□ -0.38
LTBR-203ENST00000441074 TNFAIP3P21580 790 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 FOXN2P32314 431 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 HOXD13P35453 343 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 TCEAL1Q15170 157 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 CCDC174Q6PII3 467 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 SLC7A6OSQ96CW6 309 aaPredicted RBP12.68□□□□□ -0.38
LTBR-203ENST00000441074 ERP27Q96DN0 273 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 IFT43Q96FT9 208 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 BICD1Q96G01 975 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 TRAPPC9Q96Q05 1148 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 LRRC37BQ96QE4 947 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 TBC1D10AQ9BXI6 508 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 TRIM4Q9C037 500 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 ZHX3Q9H4I2 956 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 DCLRE1BQ9H816 532 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 TYW1Q9NV66 732 aaKnown RBP12.68□□□□□ -0.38
LTBR-203ENST00000441074 GPRC5DQ9NZD1 345 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 DLGAP2Q9P1A6 1054 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 LGALS13Q9UHV8 139 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 HAO1Q9UJM8 370 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 MTUS1Q9ULD2 1270 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 CHKBQ9Y259 395 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 ACTL7BQ9Y614 415 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 MROH7Q68CQ1 1323 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 ADGRA3Q8IWK6 1321 aa12.68□□□□□ -0.38
LTBR-203ENST00000441074 MAGEB2O15479 319 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 RNF8O76064 485 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 TTC4O95801 387 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 GSTA2P09210 222 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 TARSP26639 723 aaKnown RBP12.67□□□□□ -0.38
LTBR-203ENST00000441074 HIRAP54198 1017 aaPredicted RBP12.67□□□□□ -0.38
LTBR-203ENST00000441074 IL9RQ01113 521 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 RNASELQ05823 741 aaKnown RBP12.67□□□□□ -0.38
LTBR-203ENST00000441074 LAMB3Q13751 1172 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 DRAP1Q14919 205 aaPredicted RBP12.67□□□□□ -0.38
LTBR-203ENST00000441074 KCTD17Q8N5Z5 321 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 KRT35Q92764 455 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 KIFAP3Q92845 792 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 ZNF333Q96JL9 665 aa12.67□□□□□ -0.38
LTBR-203ENST00000441074 GORASP1Q9BQQ3 440 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms