RNA–Protein interactions for RNA: ENST00000439732.6

SMARCA2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-213ENST00000439732 CACTINQ8WUQ7 758 aaKnown RBP10.35□□□□□ -0.75
SMARCA2-213ENST00000439732 TMEM174Q8WUU8 243 aa10.35□□□□□ -0.75
SMARCA2-213ENST00000439732 FAM212AQ96EL1 285 aa10.35□□□□□ -0.75
SMARCA2-213ENST00000439732 FAM213AQ9BRX8 229 aa10.35□□□□□ -0.75
SMARCA2-213ENST00000439732 AGPAT3Q9NRZ7 376 aa10.35□□□□□ -0.75
SMARCA2-213ENST00000439732 LMBRD1Q9NUN5 540 aa10.35□□□□□ -0.75
SMARCA2-213ENST00000439732 HCSTQ9UBK5 93 aa10.35□□□□□ -0.75
SMARCA2-213ENST00000439732 UBQLN1Q9UMX0 589 aaKnown RBP10.35□□□□□ -0.75
SMARCA2-213ENST00000439732 SSX2IPQ9Y2D8 614 aa10.35□□□□□ -0.75
SMARCA2-213ENST00000439732 PRG3Q9Y2Y8 225 aaPredicted RBP10.35□□□□□ -0.75
SMARCA2-213ENST00000439732 PCDHA5Q9Y5H7 936 aa10.35□□□□□ -0.75
SMARCA2-213ENST00000439732 BRWD1Q9NSI6 2320 aa10.35□□□□□ -0.75
SMARCA2-213ENST00000439732 TISP43B9A030 160 aa10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 TGFB1I1O43294 461 aa10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 CXCL14O95715 111 aa10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 RPL13P26373 211 aaKnown RBP10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 PBX3P40426 434 aa10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 TNFSF9P41273 254 aa10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 TMEM132DQ14C87 1099 aa10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 NAB2Q15742 525 aa10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 COBLL1Q53SF7 1204 aa10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 SLC9A9Q8IVB4 645 aa10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 GPR65Q8IYL9 337 aa10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 VPS52Q8N1B4 723 aa10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 BEST2Q8NFU1 509 aa10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 MAFAQ8NHW3 353 aaPredicted RBP10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 NOC3LQ8WTT2 800 aaKnown RBP10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 KIF12Q96FN5 646 aa10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 ZMAT2Q96NC0 199 aaKnown RBP10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 CBWD1Q9BRT8 395 aa10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 PCIF1Q9H4Z3 704 aa10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 NSUN3Q9H649 340 aaKnown RBP10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 ENTPD7Q9NQZ7 604 aa10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 HSPBP1Q9NZL4 362 aa10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 ADAM28Q9UKQ2 775 aa10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 C2CD2Q9Y426 696 aa10.34□□□□□ -0.75
SMARCA2-213ENST00000439732 SF3B1O75533 1304 aaKnown RBP eCLIP10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 CASTOR2A6NHX0 329 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 TMEM189-UBE2V1I3L0A0 370 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 CLIC2O15247 247 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 B4GALT3O60512 393 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 EXOC3O60645 756 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 B3GAT3O94766 335 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 DNAJB1P25685 340 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 CYP2J2P51589 502 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 CAMK1Q14012 370 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 SMC1AQ14683 1233 aaKnown RBP10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 ZBTB6Q15916 424 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 UPP1Q16831 310 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 USP41Q3LFD5 358 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 GLRA4Q5JXX5 417 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 ZBTB41Q5SVQ8 909 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 SPATA1Q5VX52 437 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 KIAA1841Q6NSI8 718 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 PDXDC1Q6P996 788 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 CRELD2Q6UXH1 353 aaPredicted RBP10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 BRSK2Q8IWQ3 736 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 MICALL1Q8N3F8 863 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 MRPL43Q8N983 215 aaKnown RBP10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 TRIML1Q8N9V2 468 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 SAAL1Q96ER3 474 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 FBXL18Q96ME1 805 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 CDCA3Q99618 268 aaPredicted RBP10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 TCF25Q9BQ70 676 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 CXCL16Q9H2A7 254 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 IKZF4Q9H2S9 585 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 KCTD10Q9H3F6 313 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 MRPL17Q9NRX2 175 aaKnown RBP10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 RBAKQ9NYW8 714 aaPredicted RBP10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 KIAA1468Q9P260 1216 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 TRAF3IP3Q9Y228 551 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 FRMD4BQ9Y2L6 1034 aa10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 R3HCC1Q9Y3T6 440 aaKnown RBP10.33□□□□□ -0.76
SMARCA2-213ENST00000439732 GOLGA8IPA6NC78 632 aa10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 GOLGA8JA6NMD2 632 aa10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 TULP1O00294 542 aaPredicted RBP10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 PODXLO00592 558 aa10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 FSCN2O14926 492 aa10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 MBD3O95983 291 aa10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 NR3C1P04150 777 aa10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 SOD2P04179 222 aa10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 CTSAP10619 480 aa10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 LRPAP1P30533 357 aa10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 CLCNKBP51801 687 aa10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 ERVFC1P60507 584 aa10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 CREMQ03060 361 aa10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 CCDC85BQ15834 202 aaPredicted RBP10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 SNRNP35Q16560 246 aaKnown RBP10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 CAMK4Q16566 473 aa10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 NFIL3Q16649 462 aa10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 DUOXA2Q1HG44 320 aa10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 JADE1Q6IE81 842 aa10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 USP37Q86T82 979 aa10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 C18orf25Q96B23 403 aaPredicted RBP10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 DHTKD1Q96HY7 919 aaPredicted RBP10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 TSG101Q99816 390 aa10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 EMILIN2Q9BXX0 1053 aa10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 CLSTN2Q9H4D0 955 aa10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 TLE6Q9H808 572 aa10.32□□□□□ -0.76
SMARCA2-213ENST00000439732 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms