RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 GPC5P78333 572 aa12.65□□□□□ -0.38
SMAD3-202ENST00000439724 CUL2Q13617 745 aa12.65□□□□□ -0.38
SMAD3-202ENST00000439724 MAP9Q49MG5 647 aa12.65□□□□□ -0.38
SMAD3-202ENST00000439724 GLE1Q53GS7 698 aaKnown RBP12.65□□□□□ -0.38
SMAD3-202ENST00000439724 ATF7IP2Q5U623 682 aa12.65□□□□□ -0.38
SMAD3-202ENST00000439724 ZBTB33Q86T24 672 aa12.65□□□□□ -0.38
SMAD3-202ENST00000439724 RASGEF1CQ8N431 466 aa12.65□□□□□ -0.38
SMAD3-202ENST00000439724 METTL13Q8N6R0 699 aa12.65□□□□□ -0.38
SMAD3-202ENST00000439724 OR5B17Q8NGF7 314 aa12.65□□□□□ -0.38
SMAD3-202ENST00000439724 ACP6Q9NPH0 428 aa12.65□□□□□ -0.38
SMAD3-202ENST00000439724 RBM12Q9NTZ6 932 aaKnown RBP12.65□□□□□ -0.38
SMAD3-202ENST00000439724 PRMT7Q9NVM4 692 aaPredicted RBP12.65□□□□□ -0.38
SMAD3-202ENST00000439724 SLC5A4Q9NY91 659 aa12.65□□□□□ -0.38
SMAD3-202ENST00000439724 L1RE1Q9UN81 338 aa12.65□□□□□ -0.38
SMAD3-202ENST00000439724 COG5Q9UP83 839 aa12.65□□□□□ -0.38
SMAD3-202ENST00000439724 CNTN6Q9UQ52 1028 aa12.65□□□□□ -0.38
SMAD3-202ENST00000439724 TNFSF13BQ9Y275 285 aa12.65□□□□□ -0.38
SMAD3-202ENST00000439724 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.64□□□□□ -0.39
SMAD3-202ENST00000439724 INO80B-WBP1J3KQ70 363 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 MAP2K7O14733 419 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 SASH3O75995 380 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 CYP1A2P05177 515 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 GJB1P08034 283 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 MMP3P08254 477 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 ZNF286BP0CG31 522 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 SMPD1P17405 629 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 ACO1P21399 889 aaKnown RBP12.64□□□□□ -0.39
SMAD3-202ENST00000439724 DNA2P51530 1060 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 NOP14P78316 857 aaKnown RBP12.64□□□□□ -0.39
SMAD3-202ENST00000439724 ACVR2BQ13705 512 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 NCOA4Q13772 614 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 CLEC16AQ2KHT3 1053 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 SEZ6Q53EL9 994 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 CST9Q5W186 159 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 IQSEC1Q6DN90 963 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 USP38Q8NB14 1042 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 NPLOC4Q8TAT6 608 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 ELMO3Q96BJ8 720 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 LRRC1Q9BTT6 524 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 INO80BQ9C086 356 aaPredicted RBP12.64□□□□□ -0.39
SMAD3-202ENST00000439724 APOBEC3GQ9HC16 384 aaKnown RBP12.64□□□□□ -0.39
SMAD3-202ENST00000439724 CTTNBP2NLQ9P2B4 639 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 TMEM59LQ9UK28 342 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 GTF3C4Q9UKN8 822 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 PCDHB2Q9Y5E7 798 aa12.64□□□□□ -0.39
SMAD3-202ENST00000439724 H3BRB1 525 aa12.63□□□□□ -0.39
SMAD3-202ENST00000439724 PHACTR2O75167 634 aa12.63□□□□□ -0.39
SMAD3-202ENST00000439724 ITGBL1O95965 494 aaPredicted RBP12.63□□□□□ -0.39
SMAD3-202ENST00000439724 ASS1P00966 412 aaKnown RBP12.63□□□□□ -0.39
SMAD3-202ENST00000439724 TNFRSF8P28908 595 aa12.63□□□□□ -0.39
SMAD3-202ENST00000439724 PLA2G4AP47712 749 aa12.63□□□□□ -0.39
SMAD3-202ENST00000439724 HUNKP57058 714 aa12.63□□□□□ -0.39
SMAD3-202ENST00000439724 IGBP1P78318 339 aa12.63□□□□□ -0.39
SMAD3-202ENST00000439724 CBX1P83916 185 aa12.63□□□□□ -0.39
SMAD3-202ENST00000439724 POU5F1Q01860 360 aaKnown RBP12.63□□□□□ -0.39
SMAD3-202ENST00000439724 ZNF568Q3ZCX4 644 aa12.63□□□□□ -0.39
SMAD3-202ENST00000439724 MORN1Q5T089 497 aa12.63□□□□□ -0.39
SMAD3-202ENST00000439724 EEF1DP3Q658K8 133 aa12.63□□□□□ -0.39
SMAD3-202ENST00000439724 SPOPLQ6IQ16 392 aa12.63□□□□□ -0.39
SMAD3-202ENST00000439724 ACAD10Q6JQN1 1059 aa12.63□□□□□ -0.39
SMAD3-202ENST00000439724 C8orf74Q6P047 294 aa12.63□□□□□ -0.39
SMAD3-202ENST00000439724 HDXQ7Z353 690 aa12.63□□□□□ -0.39
SMAD3-202ENST00000439724 RASAL3Q86YV0 1011 aa12.63□□□□□ -0.39
SMAD3-202ENST00000439724 UBR7Q8N806 425 aa12.63□□□□□ -0.39
SMAD3-202ENST00000439724 IMPG2Q9BZV3 1241 aa12.63□□□□□ -0.39
SMAD3-202ENST00000439724 CDT1Q9H211 546 aa12.63□□□□□ -0.39
SMAD3-202ENST00000439724 TUT1Q9H6E5 874 aaKnown RBP12.63□□□□□ -0.39
SMAD3-202ENST00000439724 IFT122Q9HBG6 1241 aa12.63□□□□□ -0.39
SMAD3-202ENST00000439724 TTC7AQ9ULT0 858 aaPredicted RBP12.63□□□□□ -0.39
SMAD3-202ENST00000439724 MANSC4A6NHS7 340 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-202ENST00000439724 MIF4GDA9UHW6 222 aaKnown RBP12.62□□□□□ -0.39
SMAD3-202ENST00000439724 PGRMC1O00264 195 aaKnown RBP12.62□□□□□ -0.39
SMAD3-202ENST00000439724 DDX3YO15523 660 aaKnown RBP12.62□□□□□ -0.39
SMAD3-202ENST00000439724 B4GALT5O43286 388 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 CEP104O60308 925 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 B4GALT4O60513 344 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 IL18RAPO95256 599 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 HOXC6P09630 235 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 UNGP13051 313 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-202ENST00000439724 TMOD1P28289 359 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 TNNC1P63316 161 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 DUOXA2Q1HG44 320 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 MTHFD1LQ6UB35 978 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 CCNI2Q6ZMN8 369 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-202ENST00000439724 TRIM72Q6ZMU5 477 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 OR6J1Q8NGC5 347 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 ZBTB10Q96DT7 871 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 RPS6KC1Q96S38 1066 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.62□□□□□ -0.393e-9■□□□□ 10.9
SMAD3-202ENST00000439724 UBXN6Q9BZV1 441 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 CARD9Q9H257 536 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 MINDY3Q9H8M7 445 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 UVRAGQ9P2Y5 699 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 ZHX1Q9UKY1 873 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-202ENST00000439724 NUB1Q9Y5A7 615 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 A0A087WZ62 844 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 CYP1A1P04798 512 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-202ENST00000439724 MCF2P10911 925 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 TNFAIP2Q03169 654 aa12.62□□□□□ -0.39
SMAD3-202ENST00000439724 PPFIA1Q13136 1202 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms