RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 ENPEPQ07075 957 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 FSTL1Q12841 308 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 PSMD6Q15008 389 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 ZACNQ401N2 412 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 C2CD6Q53TS8 623 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 AGBL2Q5U5Z8 902 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 TDRD10Q5VZ19 366 aaKnown RBP12.97□□□□□ -0.33
HDAC8-214ENST00000439122 TRPM4Q8TD43 1214 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 ASAP3Q8TDY4 903 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 SLC7A3Q8WY07 619 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 ZBTB45Q96K62 511 aaPredicted RBP12.97□□□□□ -0.33
HDAC8-214ENST00000439122 FAM81BQ96LP2 452 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 PLVAPQ9BX97 442 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 PABPC3Q9H361 631 aaKnown RBP12.97□□□□□ -0.33
HDAC8-214ENST00000439122 PPANQ9NQ55 473 aaKnown RBP12.97□□□□□ -0.33
HDAC8-214ENST00000439122 GGA3Q9NZ52 723 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 GRHL1Q9NZI5 618 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 PCDHB2Q9Y5E7 798 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 FAM169AQ9Y6X4 670 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 ZNF541Q9H0D2 1346 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 E7EVH7 732 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 SHBGP04278 402 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 UNGP13051 313 aaPredicted RBP12.97□□□□□ -0.33
HDAC8-214ENST00000439122 GLRA2P23416 452 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 RRM1P23921 792 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 CYP1B1Q16678 543 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 SPDYCQ5MJ68 293 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 DENND2CQ68D51 928 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 EFCAB13Q8IY85 973 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 MCOLN2Q8IZK6 566 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 TRIM7Q9C029 511 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 FAM107BQ9H098 131 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 PORCNQ9H237 461 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 RBAKQ9NYW8 714 aaPredicted RBP12.97□□□□□ -0.33
HDAC8-214ENST00000439122 MTRF1LQ9UGC7 380 aaKnown RBP12.97□□□□□ -0.33
HDAC8-214ENST00000439122 PARP2Q9UGN5 583 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 MAFBQ9Y5Q3 323 aaPredicted RBP12.97□□□□□ -0.33
HDAC8-214ENST00000439122 PTPRJQ12913 1337 aa12.97□□□□□ -0.33
HDAC8-214ENST00000439122 PEX10O60683 326 aa12.96□□□□□ -0.33
HDAC8-214ENST00000439122 C4BPAP04003 597 aaKnown RBP12.96□□□□□ -0.33
HDAC8-214ENST00000439122 TMOD1P28289 359 aa12.96□□□□□ -0.33
HDAC8-214ENST00000439122 GBP1P32455 592 aa12.96□□□□□ -0.33
HDAC8-214ENST00000439122 NSFP46459 744 aaKnown RBP12.96□□□□□ -0.33
HDAC8-214ENST00000439122 PPP2R2AP63151 447 aa12.96□□□□□ -0.33
HDAC8-214ENST00000439122 CLDN10P78369 228 aa12.96□□□□□ -0.33
HDAC8-214ENST00000439122 PPP1R7Q15435 360 aa12.96□□□□□ -0.33
HDAC8-214ENST00000439122 TARS2Q9BW92 718 aaKnown RBP12.96□□□□□ -0.33
HDAC8-214ENST00000439122 HAPLN2Q9GZV7 340 aa12.96□□□□□ -0.33
HDAC8-214ENST00000439122 AFG3L2Q9Y4W6 797 aa12.96□□□□□ -0.33
HDAC8-214ENST00000439122 MAGEA9P43362 315 aa12.96□□□□□ -0.34
HDAC8-214ENST00000439122 NAMPTP43490 491 aa12.96□□□□□ -0.34
HDAC8-214ENST00000439122 BPIFB4P59827 614 aa12.96□□□□□ -0.34
HDAC8-214ENST00000439122 MKRN4PQ13434 485 aaPredicted RBP12.96□□□□□ -0.34
HDAC8-214ENST00000439122 SIX1Q15475 284 aaPredicted RBP12.96□□□□□ -0.34
HDAC8-214ENST00000439122 ZBTB41Q5SVQ8 909 aa12.96□□□□□ -0.34
HDAC8-214ENST00000439122 LLGL2Q6P1M3 1020 aa12.96□□□□□ -0.34
HDAC8-214ENST00000439122 CRELD2Q6UXH1 353 aaPredicted RBP12.96□□□□□ -0.34
HDAC8-214ENST00000439122 B4GALNT4Q76KP1 1039 aa12.96□□□□□ -0.34
HDAC8-214ENST00000439122 HOOK3Q86VS8 718 aa12.96□□□□□ -0.34
HDAC8-214ENST00000439122 NLRP14Q86W24 1093 aa12.96□□□□□ -0.34
HDAC8-214ENST00000439122 ZNF677Q86XU0 584 aa12.96□□□□□ -0.34
HDAC8-214ENST00000439122 C1orf54Q8WWF1 131 aa12.96□□□□□ -0.34
HDAC8-214ENST00000439122 CYFIP2Q96F07 1278 aa12.96□□□□□ -0.34
HDAC8-214ENST00000439122 RUNDC3BQ96NL0 473 aa12.96□□□□□ -0.34
HDAC8-214ENST00000439122 CCT8L2Q96SF2 557 aa12.96□□□□□ -0.34
HDAC8-214ENST00000439122 MSTO1Q9BUK6 570 aa12.96□□□□□ -0.34
HDAC8-214ENST00000439122 EPB41L4BQ9H329 900 aa12.96□□□□□ -0.34
HDAC8-214ENST00000439122 DHX33Q9H6R0 707 aaKnown RBP12.96□□□□□ -0.34
HDAC8-214ENST00000439122 FBXO40Q9UH90 709 aa12.96□□□□□ -0.34
HDAC8-214ENST00000439122 SLC12A6Q9UHW9 1150 aa12.96□□□□□ -0.34
HDAC8-214ENST00000439122 MROH7Q68CQ1 1323 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 MYPNQ86TC9 1320 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 PASKQ96RG2 1323 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 BRCA1P38398 1863 aaKnown RBP12.95□□□□□ -0.34
HDAC8-214ENST00000439122 CAND2O75155 1236 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 VNN1O95497 513 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 ECEL1O95672 775 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 HARSP12081 509 aaKnown RBP12.95□□□□□ -0.34
HDAC8-214ENST00000439122 SSTR3P32745 418 aaPredicted RBP12.95□□□□□ -0.34
HDAC8-214ENST00000439122 FNTAP49354 379 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 SNX1Q13596 522 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 SLC29A2Q14542 456 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 SGO2Q562F6 1265 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 SLFN12LQ6IEE8 588 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 TMEM270Q6UE05 265 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 PASD1Q8IV76 773 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 DNERQ8NFT8 737 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 MYCBPAPQ8TBZ2 947 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 ZNF473Q8WTR7 871 aaKnown RBP12.95□□□□□ -0.34
HDAC8-214ENST00000439122 CEP89Q96ST8 783 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 STYXL1Q9Y6J8 313 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 TLDC2A0PJX2 215 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 SMIM23A6NLE4 172 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 ATG7O95352 703 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 NUDT17P0C025 328 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 MYBL1P10243 752 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 ICAM3P32942 547 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 CUL2Q13617 745 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 SEZ6Q53EL9 994 aa12.95□□□□□ -0.34
HDAC8-214ENST00000439122 RNF25Q96BH1 459 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms