RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 CBWD2Q8IUF1 395 aa17.56■□□□□ 0.4
SNRPB-202ENST00000438552 C12orf56Q8IXR9 622 aa17.56■□□□□ 0.4
SNRPB-202ENST00000438552 GOLGA5Q8TBA6 731 aa17.56■□□□□ 0.4
SNRPB-202ENST00000438552 MARCH5Q9NX47 278 aa17.56■□□□□ 0.4
SNRPB-202ENST00000438552 CGNQ9P2M7 1197 aaKnown RBP17.56■□□□□ 0.4
SNRPB-202ENST00000438552 FAN1Q9Y2M0 1017 aa17.56■□□□□ 0.4
SNRPB-202ENST00000438552 TULP1O00294 542 aaPredicted RBP17.55■□□□□ 0.4
SNRPB-202ENST00000438552 PDXKO00764 312 aa17.55■□□□□ 0.4
SNRPB-202ENST00000438552 KIAA0391O15091 583 aaKnown RBP17.55■□□□□ 0.4
SNRPB-202ENST00000438552 MBD3O95983 291 aa17.55■□□□□ 0.4
SNRPB-202ENST00000438552 NR3C1P04150 777 aa17.55■□□□□ 0.4
SNRPB-202ENST00000438552 ADRB2P07550 413 aa17.55■□□□□ 0.4
SNRPB-202ENST00000438552 FOSL2P15408 326 aa17.55■□□□□ 0.4
SNRPB-202ENST00000438552 CD44P16070 742 aaKnown RBP17.55■□□□□ 0.4
SNRPB-202ENST00000438552 IGFBP4P22692 258 aa17.55■□□□□ 0.4
SNRPB-202ENST00000438552 COBLL1Q53SF7 1204 aa17.55■□□□□ 0.4
SNRPB-202ENST00000438552 SPPL3Q8TCT6 385 aa17.55■□□□□ 0.4
SNRPB-202ENST00000438552 HASPINQ8TF76 798 aa17.55■□□□□ 0.4
SNRPB-202ENST00000438552 POF1BQ8WVV4 589 aa17.55■□□□□ 0.4
SNRPB-202ENST00000438552 TMEM169Q96HH4 297 aa17.55■□□□□ 0.4
SNRPB-202ENST00000438552 IGSF21Q96ID5 467 aa17.55■□□□□ 0.4
SNRPB-202ENST00000438552 SLC38A7Q9NVC3 462 aa17.55■□□□□ 0.4
SNRPB-202ENST00000438552 EYSQ5T1H1 3165 aa17.54■□□□□ 0.4
SNRPB-202ENST00000438552 CALUO43852 315 aaPredicted RBP17.54■□□□□ 0.4
SNRPB-202ENST00000438552 KIF4AO95239 1232 aa17.54■□□□□ 0.4
SNRPB-202ENST00000438552 IL18RAPO95256 599 aa17.54■□□□□ 0.4
SNRPB-202ENST00000438552 ALDH2P05091 517 aa17.54■□□□□ 0.4
SNRPB-202ENST00000438552 GUCY2FP51841 1108 aa17.54■□□□□ 0.4
SNRPB-202ENST00000438552 PLCB3Q01970 1234 aa17.54■□□□□ 0.4
SNRPB-202ENST00000438552 HSP90AA2PQ14568 343 aaPredicted RBP17.54■□□□□ 0.4
SNRPB-202ENST00000438552 TMEM132DQ14C87 1099 aa17.54■□□□□ 0.4
SNRPB-202ENST00000438552 SNRNP35Q16560 246 aaKnown RBP17.54■□□□□ 0.4
SNRPB-202ENST00000438552 ZCWPW2Q504Y3 356 aa17.54■□□□□ 0.4
SNRPB-202ENST00000438552 EFCAB13Q8IY85 973 aa17.54■□□□□ 0.4
SNRPB-202ENST00000438552 ADSSL1Q8N142 457 aa17.54■□□□□ 0.4
SNRPB-202ENST00000438552 XXYLT1Q8NBI6 393 aa17.54■□□□□ 0.4
SNRPB-202ENST00000438552 RDH13Q8NBN7 331 aa17.54■□□□□ 0.4
SNRPB-202ENST00000438552 FAM84AQ96KN4 292 aa17.54■□□□□ 0.4
SNRPB-202ENST00000438552 FBXL18Q96ME1 805 aa17.54■□□□□ 0.4
SNRPB-202ENST00000438552 VN1R3Q9BXE9 311 aa17.54■□□□□ 0.4
SNRPB-202ENST00000438552 GTPBP4Q9BZE4 634 aaKnown RBP17.54■□□□□ 0.4
SNRPB-202ENST00000438552 TRAF3IP3Q9Y228 551 aa17.54■□□□□ 0.4
SNRPB-202ENST00000438552 VWA8A3KMH1 1905 aa17.54■□□□□ 0.4
SNRPB-202ENST00000438552 CARNS1A5YM72 827 aa17.53■□□□□ 0.4
SNRPB-202ENST00000438552 EXOC3O60645 756 aa17.53■□□□□ 0.4
SNRPB-202ENST00000438552 CLCNKBP51801 687 aa17.53■□□□□ 0.4
SNRPB-202ENST00000438552 STIM1Q13586 685 aa17.53■□□□□ 0.4
SNRPB-202ENST00000438552 CAMK1Q14012 370 aa17.53■□□□□ 0.4
SNRPB-202ENST00000438552 CD302Q8IX05 232 aa17.53■□□□□ 0.4
SNRPB-202ENST00000438552 MICALL1Q8N3F8 863 aa17.53■□□□□ 0.4
SNRPB-202ENST00000438552 MRPL38Q96DV4 380 aaKnown RBP17.53■□□□□ 0.4
SNRPB-202ENST00000438552 ASB7Q9H672 318 aa17.53■□□□□ 0.4
SNRPB-202ENST00000438552 PDE11AQ9HCR9 933 aa17.53■□□□□ 0.4
SNRPB-202ENST00000438552 DMAC2Q9NW81 257 aa17.53■□□□□ 0.4
SNRPB-202ENST00000438552 UBQLN1Q9UMX0 589 aaKnown RBP17.53■□□□□ 0.4
SNRPB-202ENST00000438552 PCDHGC5Q9Y5F6 944 aa17.53■□□□□ 0.4
SNRPB-202ENST00000438552 MTCH2Q9Y6C9 303 aa17.53■□□□□ 0.4
SNRPB-202ENST00000438552 PRRC2BQ5JSZ5 2229 aaKnown RBP17.53■□□□□ 0.4
SNRPB-202ENST00000438552 TSC2P49815 1807 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 TRIM49BA6NDI0 452 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 ZNF233A6NK53 670 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 PODXLO00592 558 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 NR2F2P24468 414 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 IGFBP6P24592 240 aaPredicted RBP17.52■□□□□ 0.4
SNRPB-202ENST00000438552 IRS1P35568 1242 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 CASP4P49662 377 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 PMS1P54277 932 aaKnown RBP17.52■□□□□ 0.4
SNRPB-202ENST00000438552 POU5F1Q01860 360 aaKnown RBP17.52■□□□□ 0.4
SNRPB-202ENST00000438552 KRT17Q04695 432 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 UBE3AQ05086 875 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 CYP24A1Q07973 514 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 ZBTB6Q15916 424 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 PTPROQ16827 1216 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 LMBRD2Q68DH5 695 aaPredicted RBP17.52■□□□□ 0.4
SNRPB-202ENST00000438552 KLHL10Q6JEL2 608 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 SLC9A9Q8IVB4 645 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 TRIML1Q8N9V2 468 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 C3orf58Q8NDZ4 430 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 UROC1Q96N76 676 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 COLEC11Q9BWP8 271 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 LMAN2LQ9H0V9 348 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 KIAA1586Q9HCI6 787 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 TLR9Q9NR96 1032 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 ADAM28Q9UKQ2 775 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 CTNND2Q9UQB3 1225 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 LZTS1Q9Y250 596 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 DERAQ9Y315 318 aa17.52■□□□□ 0.4
SNRPB-202ENST00000438552 PTPRJQ12913 1337 aa17.51■□□□□ 0.39
SNRPB-202ENST00000438552 PPP1R3GB7ZBB8 358 aa17.51■□□□□ 0.39
SNRPB-202ENST00000438552 PSMA7O14818 248 aa17.51■□□□□ 0.39
SNRPB-202ENST00000438552 XPOTO43592 962 aaKnown RBP17.51■□□□□ 0.39
SNRPB-202ENST00000438552 SCN1AP35498 2009 aa17.51■□□□□ 0.39
SNRPB-202ENST00000438552 NFIL3Q16649 462 aa17.51■□□□□ 0.39
SNRPB-202ENST00000438552 UPP1Q16831 310 aa17.51■□□□□ 0.39
SNRPB-202ENST00000438552 SPATA1Q5VX52 437 aa17.51■□□□□ 0.39
SNRPB-202ENST00000438552 PLPP4Q5VZY2 271 aa17.51■□□□□ 0.39
SNRPB-202ENST00000438552 CEP135Q66GS9 1140 aa17.51■□□□□ 0.39
SNRPB-202ENST00000438552 CENPPQ6IPU0 288 aa17.51■□□□□ 0.39
SNRPB-202ENST00000438552 DDX53Q86TM3 631 aaKnown RBP17.51■□□□□ 0.39
SNRPB-202ENST00000438552 BEST2Q8NFU1 509 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms