RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 EPC2Q52LR7 807 aa10.9□□□□□ -0.66
SHPRH-206ENST00000438092 DCAF6Q58WW2 860 aa10.9□□□□□ -0.66
SHPRH-206ENST00000438092 CYP4A22Q5TCH4 519 aa10.9□□□□□ -0.66
SHPRH-206ENST00000438092 RHOT1Q8IXI2 618 aa10.9□□□□□ -0.66
SHPRH-206ENST00000438092 ATPAF2Q8N5M1 289 aa10.9□□□□□ -0.66
SHPRH-206ENST00000438092 DNAJC7Q99615 494 aa10.9□□□□□ -0.66
SHPRH-206ENST00000438092 LATS2Q9NRM7 1088 aa10.9□□□□□ -0.66
SHPRH-206ENST00000438092 BFARQ9NZS9 450 aa10.9□□□□□ -0.66
SHPRH-206ENST00000438092 ZCCHC11Q5TAX3 1644 aaKnown RBP10.9□□□□□ -0.66
SHPRH-206ENST00000438092 TTC37Q6PGP7 1564 aa10.9□□□□□ -0.66
SHPRH-206ENST00000438092 HSP90AA5PQ58FG0 334 aa10.9□□□□□ -0.66
SHPRH-206ENST00000438092 AARS2Q5JTZ9 985 aaKnown RBP10.9□□□□□ -0.66
SHPRH-206ENST00000438092 DHX40Q8IX18 779 aaKnown RBP10.9□□□□□ -0.66
SHPRH-206ENST00000438092 DDX50Q9BQ39 737 aaKnown RBP10.9□□□□□ -0.66
SHPRH-206ENST00000438092 THEGQ9P2T0 379 aa10.9□□□□□ -0.66
SHPRH-206ENST00000438092 SCOCQ9UIL1 159 aa10.9□□□□□ -0.66
SHPRH-206ENST00000438092 PKP3Q9Y446 797 aa10.9□□□□□ -0.66
SHPRH-206ENST00000438092 HECW2Q9P2P5 1572 aa10.9□□□□□ -0.66
SHPRH-206ENST00000438092 NCOA4Q13772 614 aa10.9□□□□□ -0.67
SHPRH-206ENST00000438092 C10orf120Q5SQS8 335 aa10.9□□□□□ -0.67
SHPRH-206ENST00000438092 ALS2CLQ60I27 953 aa10.9□□□□□ -0.67
SHPRH-206ENST00000438092 PPP1R18Q6NYC8 613 aa10.9□□□□□ -0.67
SHPRH-206ENST00000438092 ANKS3Q6ZW76 656 aa10.9□□□□□ -0.67
SHPRH-206ENST00000438092 TADA2BQ86TJ2 420 aa10.9□□□□□ -0.67
SHPRH-206ENST00000438092 CEP70Q8NHQ1 597 aa10.9□□□□□ -0.67
SHPRH-206ENST00000438092 TGS1Q96RS0 853 aaKnown RBP10.9□□□□□ -0.67
SHPRH-206ENST00000438092 SMARCAD1Q9H4L7 1026 aa10.9□□□□□ -0.67
SHPRH-206ENST00000438092 OVOS2A0A0G2JMS6 1433 aa10.9□□□□□ -0.67
SHPRH-206ENST00000438092 OVOS2A0A0J9YW53 1432 aa10.9□□□□□ -0.67
SHPRH-206ENST00000438092 OVOS2Q6IE36 1432 aa10.9□□□□□ -0.67
SHPRH-206ENST00000438092 CDKL3Q8IVW4 592 aaPredicted RBP10.89□□□□□ -0.67
SHPRH-206ENST00000438092 MB21D2Q8IYB1 491 aaPredicted RBP10.89□□□□□ -0.67
SHPRH-206ENST00000438092 UBE2Q2Q8WVN8 375 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 FAM161BQ96MY7 647 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 ENTPD7Q9NQZ7 604 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 TMEM161AQ9NX61 479 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 CHCHD3Q9NX63 227 aaKnown RBP10.89□□□□□ -0.67
SHPRH-206ENST00000438092 CACNA2D2Q9NY47 1150 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 RNF14Q9UBS8 474 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 TRIM33Q9UPN9 1127 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 CHD1O14646 1710 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 ADRA2BP18089 450 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 PRR5LQ6MZQ0 368 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 SH3TC2Q8TF17 1288 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 SEPT8Q92599 483 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 C18orf8Q96DM3 657 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 CENPKQ9BS16 269 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 KATNAL1Q9BW62 490 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 TMEM117Q9H0C3 514 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 A0A087WUV0 522 aaPredicted RBP10.89□□□□□ -0.67
SHPRH-206ENST00000438092 PRKCEQ02156 737 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 KLHL38Q2WGJ6 581 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 NSUN4Q96CB9 384 aaKnown RBP10.89□□□□□ -0.67
SHPRH-206ENST00000438092 AGPAT1Q99943 283 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 TEX13BQ9BXU2 312 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 TTC26A0AVF1 554 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 PBLDP30039 288 aaPredicted RBP10.89□□□□□ -0.67
SHPRH-206ENST00000438092 EIF3BP55884 814 aaKnown RBP10.89□□□□□ -0.67
SHPRH-206ENST00000438092 SDE2Q6IQ49 451 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 MTIF3Q9H2K0 278 aaKnown RBP10.89□□□□□ -0.67
SHPRH-206ENST00000438092 PNMA8BQ9ULN7 279 aaPredicted RBP10.89□□□□□ -0.67
SHPRH-206ENST00000438092 CYP2C9P11712 490 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 DNAJB2P25686 324 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 REEP2Q9BRK0 252 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 MAP10Q9P2G4 905 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 AMACRQ9UHK6 382 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 NAGPAQ9UK23 515 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 V9GYQ6 96 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 SUPT3HB4E1H0 165 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 SUPT3HO75486 399 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 NDUFS3O75489 264 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 DCTN3O75935 186 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 BRAFP15056 766 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 PDGFRAP16234 1089 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 CUL3Q13618 768 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 C12orf60Q5U649 245 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 IPMKQ8NFU5 416 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 SNF8Q96H20 258 aa10.89□□□□□ -0.67
SHPRH-206ENST00000438092 MARCOQ9UEW3 520 aaPredicted RBP10.89□□□□□ -0.67
SHPRH-206ENST00000438092 MRPL42Q9Y6G3 142 aaKnown RBP10.89□□□□□ -0.67
SHPRH-206ENST00000438092 RPAP1Q9BWH6 1393 aaPredicted RBP10.89□□□□□ -0.67
SHPRH-206ENST00000438092 MAGI3Q5TCQ9 1506 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 MAP3K6O95382 1288 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 GOLGA7BQ2TAP0 167 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 TRIM45Q9H8W5 580 aaPredicted RBP10.88□□□□□ -0.67
SHPRH-206ENST00000438092 DDX56Q9NY93 547 aaKnown RBP10.88□□□□□ -0.67
SHPRH-206ENST00000438092 PRR12Q9ULL5 1215 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 HMGB1P1B2RPK0 211 aaPredicted RBP10.88□□□□□ -0.67
SHPRH-206ENST00000438092 ZNF197O14709 1029 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 SPTLC1O15269 473 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 LRG1P02750 347 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 SOAT1P35610 550 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 ACTR2P61160 394 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 BTKQ06187 659 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 ZRANB3Q5FWF4 1079 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 MEI1Q5TIA1 1274 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 MMS22LQ6ZRQ5 1243 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 DEFB128Q7Z7B8 93 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 FAM136AQ96C01 138 aa10.88□□□□□ -0.67
SHPRH-206ENST00000438092 TUBB6Q9BUF5 446 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms