RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 PER3P56645 1201 aa4.62□□□□□ -1.67
HMGB1P31-201ENST00000437242 CCT2P78371 535 aaKnown RBP4.62□□□□□ -1.67
HMGB1P31-201ENST00000437242 THNSL2Q86YJ6 484 aa4.62□□□□□ -1.67
HMGB1P31-201ENST00000437242 GPR156Q8NFN8 814 aa4.62□□□□□ -1.67
HMGB1P31-201ENST00000437242 LEO1Q8WVC0 666 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P31-201ENST00000437242 SMG7Q92540 1137 aaKnown RBP4.62□□□□□ -1.67
HMGB1P31-201ENST00000437242 USP7Q93009 1102 aa4.62□□□□□ -1.67
HMGB1P31-201ENST00000437242 KLK15Q9H2R5 256 aa4.62□□□□□ -1.67
HMGB1P31-201ENST00000437242 TOPORSQ9NS56 1045 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P31-201ENST00000437242 LANCL2Q9NS86 450 aa4.62□□□□□ -1.67
HMGB1P31-201ENST00000437242 SLC17A6Q9P2U8 582 aa4.62□□□□□ -1.67
HMGB1P31-201ENST00000437242 RNF7Q9UBF6 113 aa4.62□□□□□ -1.67
HMGB1P31-201ENST00000437242 USP25Q9UHP3 1055 aa4.62□□□□□ -1.67
HMGB1P31-201ENST00000437242 PNPLA7Q6ZV29 1317 aa4.62□□□□□ -1.67
HMGB1P31-201ENST00000437242 ATRNL1Q5VV63 1379 aa4.62□□□□□ -1.67
HMGB1P31-201ENST00000437242 AATKQ6ZMQ8 1374 aa4.62□□□□□ -1.67
HMGB1P31-201ENST00000437242 LRRC3CA6NJW4 275 aa4.61□□□□□ -1.67
HMGB1P31-201ENST00000437242 C1QL1O75973 258 aa4.61□□□□□ -1.67
HMGB1P31-201ENST00000437242 IL2RBP14784 551 aa4.61□□□□□ -1.67
HMGB1P31-201ENST00000437242 AKNAD1Q5T1N1 836 aa4.61□□□□□ -1.67
HMGB1P31-201ENST00000437242 Q6ZVL8 140 aa4.61□□□□□ -1.67
HMGB1P31-201ENST00000437242 COLGALT2Q8IYK4 626 aa4.61□□□□□ -1.67
HMGB1P31-201ENST00000437242 PQLC1Q8N2U9 271 aa4.61□□□□□ -1.67
HMGB1P31-201ENST00000437242 PTCD3Q96EY7 689 aaKnown RBP4.61□□□□□ -1.67
HMGB1P31-201ENST00000437242 PDLIM2Q96JY6 352 aa4.61□□□□□ -1.67
HMGB1P31-201ENST00000437242 SENP6Q9GZR1 1112 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P31-201ENST00000437242 PIF1Q9H611 641 aa4.61□□□□□ -1.67
HMGB1P31-201ENST00000437242 KCTD5Q9NXV2 234 aa4.61□□□□□ -1.67
HMGB1P31-201ENST00000437242 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P31-201ENST00000437242 DNAJC9-AS1A6NH13 148 aa4.6□□□□□ -1.67
HMGB1P31-201ENST00000437242 PROP1O75360 226 aa4.6□□□□□ -1.67
HMGB1P31-201ENST00000437242 ULK1O75385 1050 aa4.6□□□□□ -1.67
HMGB1P31-201ENST00000437242 ERN1O75460 977 aaKnown RBP4.6□□□□□ -1.67
HMGB1P31-201ENST00000437242 ABCG1P45844 678 aa4.6□□□□□ -1.67
HMGB1P31-201ENST00000437242 ALDH1A3P47895 512 aa4.6□□□□□ -1.67
HMGB1P31-201ENST00000437242 VAV2P52735 878 aa4.6□□□□□ -1.67
HMGB1P31-201ENST00000437242 SESN3P58005 492 aa4.6□□□□□ -1.67
HMGB1P31-201ENST00000437242 ZNF529Q6P280 563 aa4.6□□□□□ -1.67
HMGB1P31-201ENST00000437242 NPM2Q86SE8 214 aaKnown RBP4.6□□□□□ -1.67
HMGB1P31-201ENST00000437242 AUTS2Q8WXX7 1259 aa4.6□□□□□ -1.67
HMGB1P31-201ENST00000437242 SLC29A3Q9BZD2 475 aa4.6□□□□□ -1.67
HMGB1P31-201ENST00000437242 UNKLQ9H9P5 680 aaKnown RBP4.6□□□□□ -1.67
HMGB1P31-201ENST00000437242 ASB6Q9NWX5 421 aa4.6□□□□□ -1.67
HMGB1P31-201ENST00000437242 SIK3Q9Y2K2 1263 aa4.6□□□□□ -1.67
HMGB1P31-201ENST00000437242 CCDC78A2IDD5 438 aa4.59□□□□□ -1.67
HMGB1P31-201ENST00000437242 GSG1L2A8MUP6 293 aa4.59□□□□□ -1.67
HMGB1P31-201ENST00000437242 WNT10BO00744 389 aa4.59□□□□□ -1.67
HMGB1P31-201ENST00000437242 SLC6A2P23975 617 aa4.59□□□□□ -1.67
HMGB1P31-201ENST00000437242 SREBF1P36956 1147 aa4.59□□□□□ -1.67
HMGB1P31-201ENST00000437242 MRPS9P82933 396 aaKnown RBP4.59□□□□□ -1.67
HMGB1P31-201ENST00000437242 UBXN2BQ14CS0 331 aa4.59□□□□□ -1.67
HMGB1P31-201ENST00000437242 CYP2A13Q16696 494 aa4.59□□□□□ -1.67
HMGB1P31-201ENST00000437242 DALRD3Q5D0E6 543 aaKnown RBP4.59□□□□□ -1.67
HMGB1P31-201ENST00000437242 MICALCLQ6ZW33 695 aa4.59□□□□□ -1.67
HMGB1P31-201ENST00000437242 BHLHA9Q7RTU4 235 aa4.59□□□□□ -1.67
HMGB1P31-201ENST00000437242 CLRN3Q8NCR9 226 aa4.59□□□□□ -1.67
HMGB1P31-201ENST00000437242 TSPEARQ8WU66 669 aa4.59□□□□□ -1.67
HMGB1P31-201ENST00000437242 NACC2Q96BF6 587 aa4.59□□□□□ -1.67
HMGB1P31-201ENST00000437242 QRSL1Q9H0R6 528 aaKnown RBP4.59□□□□□ -1.67
HMGB1P31-201ENST00000437242 KMT5AQ9NQR1 393 aa4.59□□□□□ -1.67
HMGB1P31-201ENST00000437242 RBM12Q9NTZ6 932 aaKnown RBP4.59□□□□□ -1.67
HMGB1P31-201ENST00000437242 TEX33O43247 280 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 ORC4O43929 436 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 PEX1O43933 1283 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 BPIP17213 487 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 GUCY1A2P33402 732 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 SRSF4Q08170 494 aaKnown RBP4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 ADRM1Q16186 407 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 GEN1Q17RS7 908 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 MUM1L1Q5H9M0 696 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 OTUD7BQ6GQQ9 843 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 LNX2Q8N448 690 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 SSH3Q8TE77 659 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 STON2Q8WXE9 905 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 UBXN4Q92575 508 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 FATE1Q969F0 183 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 UROC1Q96N76 676 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 ACE2Q9BYF1 805 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 LDAHQ9H6V9 325 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 GREM2Q9H772 168 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 IFT122Q9HBG6 1241 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 IL17RBQ9NRM6 502 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 TMEM140Q9NV12 185 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 FBXO34Q9NWN3 711 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 FAM30AQ9NZY2 134 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 AJAP1Q9UKB5 411 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 ZBTB21Q9ULJ3 1066 aa4.58□□□□□ -1.68
HMGB1P31-201ENST00000437242 TRGV11A0A075B6L2 103 aa4.57□□□□□ -1.68
HMGB1P31-201ENST00000437242 PDE8AO60658 829 aa4.57□□□□□ -1.68
HMGB1P31-201ENST00000437242 PRSS23O95084 383 aa4.57□□□□□ -1.68
HMGB1P31-201ENST00000437242 CKBP12277 381 aa4.57□□□□□ -1.68
HMGB1P31-201ENST00000437242 ALAS1P13196 640 aa4.57□□□□□ -1.68
HMGB1P31-201ENST00000437242 MTHFD2P13995 350 aa4.57□□□□□ -1.68
HMGB1P31-201ENST00000437242 DHCR24Q15392 516 aa4.57□□□□□ -1.68
HMGB1P31-201ENST00000437242 MUM1Q2TAK8 710 aa4.57□□□□□ -1.68
HMGB1P31-201ENST00000437242 SEM1Q6ZVN7 128 aa4.57□□□□□ -1.68
HMGB1P31-201ENST00000437242 UBE3BQ7Z3V4 1068 aa4.57□□□□□ -1.68
HMGB1P31-201ENST00000437242 GRASPQ7Z6J2 395 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P31-201ENST00000437242 SCARB1Q8WTV0 552 aa4.57□□□□□ -1.68
HMGB1P31-201ENST00000437242 CASKIN2Q8WXE0 1202 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms