RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 DDX27Q96GQ7 796 aaKnown RBP17.73■□□□□ 0.43
SMPD4-207ENST00000435455 C7orf25Q9BPX7 421 aa17.73■□□□□ 0.43
SMPD4-207ENST00000435455 GPR62Q9BZJ7 368 aa17.73■□□□□ 0.43
SMPD4-207ENST00000435455 CHST7Q9NS84 486 aa17.73■□□□□ 0.43
SMPD4-207ENST00000435455 DZANK1Q9NVP4 752 aa17.73■□□□□ 0.43
SMPD4-207ENST00000435455 CACNG4Q9UBN1 327 aa17.73■□□□□ 0.43
SMPD4-207ENST00000435455 USP25Q9UHP3 1055 aa17.73■□□□□ 0.43
SMPD4-207ENST00000435455 HCFC2Q9Y5Z7 792 aa17.73■□□□□ 0.43
SMPD4-207ENST00000435455 STYXL1Q9Y6J8 313 aa17.73■□□□□ 0.43
SMPD4-207ENST00000435455 TTC26A0AVF1 554 aa17.72■□□□□ 0.43
SMPD4-207ENST00000435455 ANKRD63C9JTQ0 380 aa17.72■□□□□ 0.43
SMPD4-207ENST00000435455 C2CD2LO14523 706 aa17.72■□□□□ 0.43
SMPD4-207ENST00000435455 MBTPS2O43462 519 aa17.72■□□□□ 0.43
SMPD4-207ENST00000435455 FAM189A1O60320 539 aa17.72■□□□□ 0.43
SMPD4-207ENST00000435455 KIF4AO95239 1232 aa17.72■□□□□ 0.43
SMPD4-207ENST00000435455 SLFN14P0C7P3 912 aa17.72■□□□□ 0.43
SMPD4-207ENST00000435455 CXCL8P10145 99 aa17.72■□□□□ 0.43
SMPD4-207ENST00000435455 KLRC2P26717 231 aa17.72■□□□□ 0.43
SMPD4-207ENST00000435455 RBM10P98175 930 aaKnown RBP17.72■□□□□ 0.43
SMPD4-207ENST00000435455 CREMQ03060 361 aa17.72■□□□□ 0.43
SMPD4-207ENST00000435455 POSTNQ15063 836 aa17.72■□□□□ 0.43
SMPD4-207ENST00000435455 TPRNQ4KMQ1 711 aa17.72■□□□□ 0.43
SMPD4-207ENST00000435455 KIAA0319Q5VV43 1072 aa17.72■□□□□ 0.43
SMPD4-207ENST00000435455 ANKRD54Q6NXT1 300 aa17.72■□□□□ 0.43
SMPD4-207ENST00000435455 DCLRE1AQ6PJP8 1040 aa17.72■□□□□ 0.43
SMPD4-207ENST00000435455 CHAMP1Q96JM3 812 aa17.72■□□□□ 0.43
SMPD4-207ENST00000435455 ZMAT2Q96NC0 199 aaKnown RBP17.72■□□□□ 0.43
SMPD4-207ENST00000435455 TSPAN18Q96SJ8 248 aa17.72■□□□□ 0.43
SMPD4-207ENST00000435455 RPF1Q9H9Y2 349 aaKnown RBP17.72■□□□□ 0.43
SMPD4-207ENST00000435455 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.72■□□□□ 0.43
SMPD4-207ENST00000435455 TRAPPC3O43617 180 aa17.71■□□□□ 0.43
SMPD4-207ENST00000435455 B3GAT3O94766 335 aa17.71■□□□□ 0.43
SMPD4-207ENST00000435455 ADH1AP07327 375 aa17.71■□□□□ 0.43
SMPD4-207ENST00000435455 CNPP09543 421 aaKnown RBP17.71■□□□□ 0.43
SMPD4-207ENST00000435455 IL9P15248 144 aa17.71■□□□□ 0.43
SMPD4-207ENST00000435455 PFKFB1P16118 471 aa17.71■□□□□ 0.43
SMPD4-207ENST00000435455 RPL9P32969 192 aaKnown RBP17.71■□□□□ 0.43
SMPD4-207ENST00000435455 PPP2R3AQ06190 1150 aa17.71■□□□□ 0.43
SMPD4-207ENST00000435455 SMAD2Q15796 467 aaKnown RBP17.71■□□□□ 0.43
SMPD4-207ENST00000435455 UPP1Q16831 310 aa17.71■□□□□ 0.43
SMPD4-207ENST00000435455 SYCP3Q8IZU3 236 aa17.71■□□□□ 0.43
SMPD4-207ENST00000435455 HASPINQ8TF76 798 aa17.71■□□□□ 0.43
SMPD4-207ENST00000435455 SLC22A17Q8WUG5 538 aa17.71■□□□□ 0.43
SMPD4-207ENST00000435455 KLHL5Q96PQ7 755 aa17.71■□□□□ 0.43
SMPD4-207ENST00000435455 GOLGA2P5Q9HBQ8 144 aa17.71■□□□□ 0.43
SMPD4-207ENST00000435455 RXFP1Q9HBX9 757 aa17.71■□□□□ 0.43
SMPD4-207ENST00000435455 PRKAG3Q9UGI9 489 aa17.71■□□□□ 0.43
SMPD4-207ENST00000435455 AGO2Q9UKV8 859 aaKnown RBP17.71■□□□□ 0.43
SMPD4-207ENST00000435455 A0A1B0GVL5 298 aa17.7■□□□□ 0.42
SMPD4-207ENST00000435455 MEFVO15553 781 aaPredicted RBP17.7■□□□□ 0.42
SMPD4-207ENST00000435455 XPOTO43592 962 aaKnown RBP17.7■□□□□ 0.42
SMPD4-207ENST00000435455 MYBP10242 640 aa17.7■□□□□ 0.42
SMPD4-207ENST00000435455 TNFSF9P41273 254 aa17.7■□□□□ 0.42
SMPD4-207ENST00000435455 CLCNKBP51801 687 aa17.7■□□□□ 0.42
SMPD4-207ENST00000435455 CASP5P51878 434 aa17.7■□□□□ 0.42
SMPD4-207ENST00000435455 POU5F1Q01860 360 aaKnown RBP17.7■□□□□ 0.42
SMPD4-207ENST00000435455 SOX4Q06945 474 aaPredicted RBP17.7■□□□□ 0.42
SMPD4-207ENST00000435455 ENOX2Q16206 610 aaKnown RBP17.7■□□□□ 0.42
SMPD4-207ENST00000435455 PDXDC1Q6P996 788 aa17.7■□□□□ 0.42
SMPD4-207ENST00000435455 UNC13DQ70J99 1090 aa17.7■□□□□ 0.42
SMPD4-207ENST00000435455 CD302Q8IX05 232 aa17.7■□□□□ 0.42
SMPD4-207ENST00000435455 RIN2Q8WYP3 895 aaPredicted RBP17.7■□□□□ 0.42
SMPD4-207ENST00000435455 POMGNT1Q8WZA1 660 aa17.7■□□□□ 0.42
SMPD4-207ENST00000435455 NECAB3Q96P71 396 aaPredicted RBP17.7■□□□□ 0.42
SMPD4-207ENST00000435455 TTPALQ9BTX7 342 aa17.7■□□□□ 0.42
SMPD4-207ENST00000435455 TMEM206Q9H813 350 aa17.7■□□□□ 0.42
SMPD4-207ENST00000435455 FNIP2Q9P278 1114 aa17.7■□□□□ 0.42
SMPD4-207ENST00000435455 SERTAD1Q9UHV2 236 aa17.7■□□□□ 0.42
SMPD4-207ENST00000435455 CPSF3Q9UKF6 684 aaKnown RBP17.7■□□□□ 0.42
SMPD4-207ENST00000435455 C5orf42Q9H799 3197 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 PVALEFA0A1B0GWK0 134 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 A0A1W2PQ27 194 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 A0A1W2PQ64 194 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 A0A1W2PQD8 194 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 LACTBL1A8MY62 500 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 TISP43B9A030 160 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 TNFRSF10AO00220 468 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 PODXLO00592 558 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 ACTN4O43707 911 aaKnown RBP17.69■□□□□ 0.42
SMPD4-207ENST00000435455 C1RP00736 705 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 ADRB2P07550 413 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 EPCAMP16422 314 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 AFMP43652 599 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 CLCN4P51793 760 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 KCNA1Q09470 495 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 FAM26FQ5R3K3 315 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 ZBTB41Q5SVQ8 909 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 FAM171A1Q5VUB5 890 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 SYCE2Q6PIF2 218 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 ELMSAN1Q6PJG2 1045 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.69■□□□□ 0.42
SMPD4-207ENST00000435455 PIK3R5Q8WYR1 880 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 C18orf25Q96B23 403 aaPredicted RBP17.69■□□□□ 0.42
SMPD4-207ENST00000435455 KIF12Q96FN5 646 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 B3GALT6Q96L58 329 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 DPP7Q9UHL4 492 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 UBQLN1Q9UMX0 589 aaKnown RBP17.69■□□□□ 0.42
SMPD4-207ENST00000435455 HPSEQ9Y251 543 aa17.69■□□□□ 0.42
SMPD4-207ENST00000435455 USP15Q9Y4E8 981 aaPredicted RBP17.69■□□□□ 0.42
SMPD4-207ENST00000435455 VWA8A3KMH1 1905 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms