RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 FAM170AA1A519 330 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 FRMD3A2A2Y4 597 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 DCDC2CA8MYV0 355 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 E7ENQ6 273 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 SNX3O60493 162 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 TRPA1O75762 1119 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 NQO1P15559 274 aaKnown RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 PSMA3P25788 255 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 GBP2P32456 591 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 IGHMBP2P38935 993 aaKnown RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 NOVP48745 357 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 PDE6CP51160 858 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 ADCY2Q08462 1091 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 KCNH2Q12809 1159 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 IFRD2Q12894 506 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 BNIP1Q12981 228 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 PICALMQ13492 652 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 BLMHQ13867 455 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 PPP1R7Q15435 360 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 PKN2Q16513 984 aaKnown RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 ASIC2Q16515 512 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 EML3Q32P44 896 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 GFOD2Q3B7J2 385 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 ZNF568Q3ZCX4 644 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 CCDC152Q4G0S7 254 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 PARP10Q53GL7 1025 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 C6orf118Q5T5N4 469 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 ASRGL1Q7L266 308 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 NT5DC3Q86UY8 548 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 KLHL7Q8IXQ5 586 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 MYOCDQ8IZQ8 938 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 FAM160A2Q8N612 972 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 UBLCP1Q8WVY7 318 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 DNAJC19Q96DA6 116 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 NAP1L3Q99457 506 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 FMO2Q99518 471 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 NSRP1Q9H0G5 558 aaKnown RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 CDH19Q9H159 772 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 STMN4Q9H169 189 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 CARD9Q9H257 536 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 GBA2Q9HCG7 927 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 POLD4Q9HCU8 107 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 RNF186Q9NXI6 227 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 CTNNAL1Q9UBT7 734 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 ADAMTS1Q9UHI8 967 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 MSRB2Q9Y3D2 182 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 PCDHA2Q9Y5H9 948 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 A0A1B0GUL6 1792 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 NCANO14594 1321 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 A6NHS1 94 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 FAM155AB1AL88 458 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 KRIT1O00522 736 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 DAPK3O43293 454 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 BUB1BO60566 1050 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 FLOT1O75955 427 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 LUC7L3O95232 432 aaKnown RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 ANP32DO95626 131 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 F12P00748 615 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 MMEP08473 750 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 RARAP10276 462 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 FOSL1P15407 271 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 CHN1P15882 459 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 KCNA2P16389 499 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 JUNDP17535 347 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 STAT3P40763 770 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 NEK2P51955 445 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 HIRAP54198 1017 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 HADHBP55084 474 aaKnown RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 POLR2FP61218 127 aaKnown RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 NCALDP61601 193 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 CHRNDQ07001 517 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 KLRC3Q07444 240 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 DHX9Q08211 1270 aaKnown RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 CCDC15Q0P6D6 951 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 MLC1Q15049 377 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 ACCSLQ4AC99 568 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 ODF2Q5BJF6 829 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 MIS18BP1Q6P0N0 1132 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 POTEGQ6S5H5 508 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 CDAN1Q8IWY9 1227 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 SYNPOQ8N3V7 929 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 TEX9Q8N6V9 391 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 PLPP7Q8NBV4 271 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 NEK9Q8TD19 979 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 AGAP11Q8TF27 550 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 GPKOWQ92917 476 aaPredicted RBP eCLIP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 NSUN4Q96CB9 384 aaKnown RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 STAMBPL1Q96FJ0 436 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 EEF2KMTQ96G04 330 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 FAM129BQ96TA1 746 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 SH3GL3Q99963 347 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 ERP44Q9BS26 406 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 LSM14BQ9BX40 385 aaKnown RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 PACSIN1Q9BY11 444 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 RTFDC1Q9BY42 306 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 RAB34Q9BZG1 259 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 CRNKL1Q9BZJ0 848 aaKnown RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 ROPN1BQ9BZX4 212 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-202ENST00000432306 KCTD10Q9H3F6 313 aa8.63□□□□□ -1.03
VTI1A-202ENST00000432306 ROPN1Q9HAT0 212 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms