RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 DDX60LQ5H9U9 1706 aaKnown RBP6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 EFCAB8A8MWE9 144 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 BOLA2-SMG1P6H3BVE0 249 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 AGRPO00253 132 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 PDE2AO00408 941 aaPredicted RBP6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 BIN1O00499 593 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 SPTLC2O15270 562 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 DLX3O60479 287 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 USP2O75604 605 aaPredicted RBP6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 MSX1P28360 303 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 PIP4K2AP48426 406 aaPredicted RBP6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 WDR4P57081 412 aaKnown RBP6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 SNAPC2Q13487 334 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 SLC14A2Q15849 920 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 RILPL1Q5EBL4 403 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 TEX35Q5T0J7 233 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 STRIP1Q5VSL9 837 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 RETSATQ6NUM9 610 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 C16orf87Q6PH81 154 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 CCDC149Q6ZUS6 474 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 SLC51AQ86UW1 340 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 CMTR2Q8IYT2 770 aaKnown RBP6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 AHI1Q8N157 1196 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 STK11IPQ8N1F8 1099 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 SLC35G2Q8TBE7 412 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 FAXDC2Q96IV6 333 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 SPAG5Q96R06 1193 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 GAS2L1Q99501 681 aaPredicted RBP6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 METTL22Q9BUU2 404 aaPredicted RBP6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 EPN3Q9H201 632 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 VPS11Q9H270 941 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 DISC1Q9NRI5 854 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 NFKBIL1Q9UBC1 381 aaPredicted RBP6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 ZNF112Q9UJU3 913 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 COQ6Q9Y2Z9 468 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 RRP15Q9Y3B9 282 aaKnown RBP6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 PCDHGB5Q9Y5G0 923 aa6.76□□□□□ -1.33
NIPAL3-205ENST00000432012 MGAMO43451 1857 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 TULP2O00295 520 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 RASA4O43374 803 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 PQBP1O60828 265 aaKnown RBP6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 TADA3O75528 432 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 ZNF202O95125 648 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 TPM1P09493 284 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 ALAS1P13196 640 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 SCNN1BP51168 640 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 SCAND1P57086 179 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 TNFAIP1Q13829 316 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 SF3B3Q15393 1217 aaKnown RBP6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 RABL6Q3YEC7 729 aaPredicted RBP6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 ITPRIPL1Q6GPH6 555 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 TRIM65Q6PJ69 517 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 VN1R5Q7Z5H4 357 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 GALNT13Q8IUC8 556 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 SNRNP27Q8WVK2 155 aaKnown RBP6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 AHCYL2Q96HN2 611 aaKnown RBP6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 KATNAL1Q9BW62 490 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 TCF7L1Q9HCS4 588 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 POLMQ9NP87 494 aaPredicted RBP6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 THG1LQ9NWX6 298 aaKnown RBP6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 ABCF2Q9UG63 623 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 ODF2LQ9ULJ1 636 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 ZSWIM8A7E2V4 1837 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 ATP8B1O43520 1251 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 URI1O94763 535 aaPredicted RBP6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 B3GALT4O96024 378 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 CAPNS1P04632 268 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 HSPD1P10809 573 aaKnown RBP6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 CKMT1AP12532 417 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 MYL6BP14649 208 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 SMARCA1P28370 1054 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 IGFALSP35858 605 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 SSR1P43307 286 aaKnown RBP6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 EVCP57679 992 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 SUMO1P63165 101 aaKnown RBP6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 DSG1Q02413 1049 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 SLC20A2Q08357 652 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 PRKG2Q13237 762 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 LRRFIP1Q32MZ4 808 aaKnown RBP6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 CCDC158Q5M9N0 1113 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 FAM205BPQ63HN1 556 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 FASTKD5Q7L8L6 764 aaKnown RBP6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 CHST3Q7LGC8 479 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 NRSN1Q8IZ57 195 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 FBXL16Q8N461 479 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 XAGE3Q8WTP9 111 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 C8orf76Q96K31 380 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 PPP1R16BQ96T49 567 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 GPATCH1Q9BRR8 931 aaKnown RBP6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 HSD3B7Q9H2F3 369 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 BHMT2Q9H2M3 363 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 PAG1Q9NWQ8 432 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 GRHPRQ9UBQ7 328 aa6.75□□□□□ -1.33
NIPAL3-205ENST00000432012 PRAMEF27A3QJZ7 478 aa6.74□□□□□ -1.33
NIPAL3-205ENST00000432012 MPHOSPH10O00566 681 aaKnown RBP6.74□□□□□ -1.33
NIPAL3-205ENST00000432012 FANCGO15287 622 aa6.74□□□□□ -1.33
NIPAL3-205ENST00000432012 PLOD3O60568 738 aa6.74□□□□□ -1.33
NIPAL3-205ENST00000432012 UFL1O94874 794 aa6.74□□□□□ -1.33
NIPAL3-205ENST00000432012 ASLP04424 464 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms