RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 FAM49BQ9NUQ9 324 aa12.13□□□□□ -0.47
SMPD4-205ENST00000431183 SYNJ2BP-COX16A0A087WUM0 186 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 LACTBL1A8MY62 500 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 F8VZ95 297 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 I3L4J1 428 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 UPP2O95045 317 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 FTLP02792 175 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-205ENST00000431183 POLR2BP30876 1174 aaKnown RBP12.12□□□□□ -0.47
SMPD4-205ENST00000431183 TAB3Q8N5C8 712 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-205ENST00000431183 C18orf25Q96B23 403 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-205ENST00000431183 LPIN3Q9BQK8 851 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 NIFKQ9BYG3 293 aaKnown RBP12.12□□□□□ -0.47
SMPD4-205ENST00000431183 GANQ9H2C0 597 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 ZCCHC17Q9NP64 241 aaKnown RBP12.12□□□□□ -0.47
SMPD4-205ENST00000431183 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-205ENST00000431183 COX16Q9P0S2 106 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 SNX9Q9Y5X1 595 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 C17orf102A2RUQ5 167 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 KCNK3O14649 394 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 CFHP08603 1231 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 ZNF865P0CJ78 1059 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-205ENST00000431183 MUTP22033 750 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 BRD2P25440 801 aaKnown RBP12.12□□□□□ -0.47
SMPD4-205ENST00000431183 CA8P35219 290 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 CPT1AP50416 773 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 SLC20A2Q08357 652 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 NYAP1Q6ZVC0 841 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 PLPPR4Q7Z2D5 763 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 KLHL7Q8IXQ5 586 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 SPIRE2Q8WWL2 714 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 GCOM2Q9BZD3 368 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-205ENST00000431183 OSBPL7Q9BZF2 842 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 TRIM31Q9BZY9 425 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 TTYH3Q9C0H2 523 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 KAT6AQ92794 2004 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 TRIM66O15016 1216 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 HCRTO43612 131 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 MSCO60682 206 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 PQBP1O60828 265 aaKnown RBP12.12□□□□□ -0.47
SMPD4-205ENST00000431183 H2AFZP0C0S5 128 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 PDE6CP51160 858 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 RABGGTBP53611 331 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 YARSP54577 528 aaKnown RBP12.12□□□□□ -0.47
SMPD4-205ENST00000431183 MFAP3P55082 362 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 FAM193AP78312 1265 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 ALCAMQ13740 583 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 TARBP2Q15633 366 aaKnown RBP12.12□□□□□ -0.47
SMPD4-205ENST00000431183 JADE1Q6IE81 842 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 SLFN12LQ6IEE8 588 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 MAMDC4Q6UXC1 1216 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 H2AFVQ71UI9 128 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 TRAPPC11Q7Z392 1133 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 KREMEN1Q96MU8 473 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 ALS2CR12Q96Q35 445 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 ACO2Q99798 780 aaKnown RBP12.12□□□□□ -0.47
SMPD4-205ENST00000431183 JPH2Q9BR39 696 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-205ENST00000431183 LUC7LQ9NQ29 371 aaKnown RBP12.12□□□□□ -0.47
SMPD4-205ENST00000431183 KLHL11Q9NVR0 708 aa12.12□□□□□ -0.47
SMPD4-205ENST00000431183 ARGLU1Q9NWB6 273 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-205ENST00000431183 CEP104O60308 925 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 GRAP2O75791 330 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 EFNA5P52803 228 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 GALCP54803 685 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 CPNE8Q86YQ8 564 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 ZNF296Q8WUU4 475 aaPredicted RBP12.11□□□□□ -0.47
SMPD4-205ENST00000431183 ACSF2Q96CM8 615 aaPredicted RBP12.11□□□□□ -0.47
SMPD4-205ENST00000431183 DEFB118Q96PH6 123 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 PPP1R12CQ9BZL4 782 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 THAP2Q9H0W7 228 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 TRPV6Q9H1D0 765 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 RASSF4Q9H2L5 321 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 NUB1Q9Y5A7 615 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 H0YCG3 227 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 OGTO15294 1046 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 PLA2G4AP47712 749 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 VAV2P52735 878 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 INHBEP58166 350 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 DUOXA2Q1HG44 320 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 C1orf220Q5T0J3 134 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 TAF4BQ92750 862 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 ZNF653Q96CK0 615 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 ANKRD36BP1Q96IX9 119 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 FAM118BQ9BPY3 351 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 IFT122Q9HBG6 1241 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 GJD2Q9UKL4 321 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 ACKR2O00590 384 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 PTENP60484 403 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 SLC7A5Q01650 507 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 MPZL3Q6UWV2 235 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 KAT2BQ92831 832 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 ACAP3Q96P50 834 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 NOX5Q96PH1 765 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 RNF208Q9H0X6 261 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 SIX2Q9NPC8 291 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 DMAC2Q9NW81 257 aa12.11□□□□□ -0.47
SMPD4-205ENST00000431183 DICER1Q9UPY3 1922 aaKnown RBP12.1□□□□□ -0.47
SMPD4-205ENST00000431183 PAPPA2Q9BXP8 1791 aa12.1□□□□□ -0.47
SMPD4-205ENST00000431183 DDX3XO00571 662 aaKnown RBP eCLIP12.1□□□□□ -0.472e-8■□□□□ 8.3
SMPD4-205ENST00000431183 POMCP01189 267 aa12.1□□□□□ -0.47
SMPD4-205ENST00000431183 ARHGAP25P42331 645 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms