RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 EPCAMP16422 314 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 RPL9P32969 192 aaKnown RBP10.71□□□□□ -0.69
HDAC6-207ENST00000430858 CLCNKBP51801 687 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 ALCAMQ13740 583 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 CBX2Q14781 532 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-207ENST00000430858 UPP1Q16831 310 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 SLC10A6Q3KNW5 377 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 SEZ6Q53EL9 994 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 ZC2HC1CQ53FD0 456 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-207ENST00000430858 HERC4Q5GLZ8 1057 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-207ENST00000430858 CES5AQ6NT32 575 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 PDXDC1Q6P996 788 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 ELMSAN1Q6PJG2 1045 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 CCDC65Q8IXS2 484 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 RIN2Q8WYP3 895 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-207ENST00000430858 DHX58Q96C10 678 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 FBXL18Q96ME1 805 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 ZMAT2Q96NC0 199 aaKnown RBP10.71□□□□□ -0.69
HDAC6-207ENST00000430858 TSPAN18Q96SJ8 248 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 PYM1Q9BRP8 204 aaKnown RBP10.71□□□□□ -0.69
HDAC6-207ENST00000430858 TTPALQ9BTX7 342 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 PHF7Q9BWX1 381 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-207ENST00000430858 HAPLN2Q9GZV7 340 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 RPF1Q9H9Y2 349 aaKnown RBP10.71□□□□□ -0.69
HDAC6-207ENST00000430858 MAGEF1Q9HAY2 307 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 CD320Q9NPF0 282 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 PANK4Q9NVE7 773 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 FNIP2Q9P278 1114 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 DPP7Q9UHL4 492 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 EXOC7Q9UPT5 735 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 PCDHB13Q9Y5F0 798 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 ATP6V1DQ9Y5K8 247 aa10.71□□□□□ -0.69
HDAC6-207ENST00000430858 TDRD15B5MCY1 1934 aaKnown RBP10.7□□□□□ -0.7
HDAC6-207ENST00000430858 TTC26A0AVF1 554 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 SPDYE4A6NLX3 237 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 PODXLO00592 558 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 MEFVO15553 781 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-207ENST00000430858 FAM189A1O60320 539 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 GCNT3O95395 438 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 GLUD1P00367 558 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 CXCL8P10145 99 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 KRT85P78386 507 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 PPP2R3AQ06190 1150 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 SOX4Q06945 474 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-207ENST00000430858 POSTNQ15063 836 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 FAM171A1Q5VUB5 890 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 RESP18Q5W5W9 173 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 CNNM4Q6P4Q7 775 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 SLC39A4Q6P5W5 647 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-207ENST00000430858 CEP57Q86XR8 500 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 CD302Q8IX05 232 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 PIK3R5Q8WYR1 880 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 B3GALT6Q96L58 329 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 NECTIN4Q96NY8 510 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 MSTO1Q9BUK6 570 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 APOL5Q9BWW9 433 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 STRA6Q9BX79 667 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 TRIM9Q9C026 710 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 SFXN1Q9H9B4 322 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 GOLGA2P5Q9HBQ8 144 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 ZDHHC9Q9Y397 364 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 STYXL1Q9Y6J8 313 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 TTC28Q96AY4 2481 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 MYH11P35749 1972 aa10.7□□□□□ -0.7
HDAC6-207ENST00000430858 LOC730098B7Z3J9 87 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 POLR2DO15514 142 aaKnown RBP10.69□□□□□ -0.7
HDAC6-207ENST00000430858 XPOTO43592 962 aaKnown RBP10.69□□□□□ -0.7
HDAC6-207ENST00000430858 ADRB2P07550 413 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 CYP3A5P20815 502 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 FGFR3P22607 806 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 TNFSF9P41273 254 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 MTHFRP42898 656 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 POU5F1Q01860 360 aaKnown RBP10.69□□□□□ -0.7
HDAC6-207ENST00000430858 RTP2Q5QGT7 225 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 ATAT1Q5SQI0 421 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 RARS2Q5T160 578 aaKnown RBP10.69□□□□□ -0.7
HDAC6-207ENST00000430858 L1TD1Q5T7N2 865 aaKnown RBP10.69□□□□□ -0.7
HDAC6-207ENST00000430858 ADALQ6DHV7 355 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 CD300LGQ6UXG3 332 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 STXBP4Q6ZWJ1 553 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 LNX1Q8TBB1 728 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-207ENST00000430858 HDAC7Q8WUI4 952 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 STAMQ92783 540 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 KIF12Q96FN5 646 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 SPATA32Q96LK8 384 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 RIPOR3Q96MK2 946 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 ACCSQ96QU6 501 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 C7orf25Q9BPX7 421 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 PLEKHA4Q9H4M7 779 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 TMEM206Q9H813 350 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 TBC1D7Q9P0N9 293 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 CPSF3Q9UKF6 684 aaKnown RBP10.69□□□□□ -0.7
HDAC6-207ENST00000430858 KCNH3Q9ULD8 1083 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 UBQLN1Q9UMX0 589 aaKnown RBP10.69□□□□□ -0.7
HDAC6-207ENST00000430858 MUC3AQ02505 3323 aa10.69□□□□□ -0.7
HDAC6-207ENST00000430858 LACTBL1A8MY62 500 aa10.68□□□□□ -0.7
HDAC6-207ENST00000430858 ANKRD63C9JTQ0 380 aa10.68□□□□□ -0.7
HDAC6-207ENST00000430858 PI4K2BG5E9Z4 385 aa10.68□□□□□ -0.7
HDAC6-207ENST00000430858 MYBP10242 640 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms