RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 CHD9Q3L8U1 2897 aa16.24■□□□□ 0.19
GARNL3-204ENST00000429629 NRP1O14786 923 aa16.23■□□□□ 0.19
GARNL3-204ENST00000429629 CD44P16070 742 aaKnown RBP16.23■□□□□ 0.19
GARNL3-204ENST00000429629 LRPAP1P30533 357 aa16.23■□□□□ 0.19
GARNL3-204ENST00000429629 CTNNB1P35222 781 aa16.23■□□□□ 0.19
GARNL3-204ENST00000429629 NLRP12P59046 1061 aa16.23■□□□□ 0.19
GARNL3-204ENST00000429629 CLDN10P78369 228 aa16.23■□□□□ 0.19
GARNL3-204ENST00000429629 PSMD6Q15008 389 aa16.23■□□□□ 0.19
GARNL3-204ENST00000429629 SPATA1Q5VX52 437 aa16.23■□□□□ 0.19
GARNL3-204ENST00000429629 PDE12Q6L8Q7 609 aaKnown RBP16.23■□□□□ 0.19
GARNL3-204ENST00000429629 DCLRE1AQ6PJP8 1040 aa16.23■□□□□ 0.19
GARNL3-204ENST00000429629 USP37Q86T82 979 aa16.23■□□□□ 0.19
GARNL3-204ENST00000429629 CACTINQ8WUQ7 758 aaKnown RBP16.23■□□□□ 0.19
GARNL3-204ENST00000429629 SAAL1Q96ER3 474 aa16.23■□□□□ 0.19
GARNL3-204ENST00000429629 PUF60Q9UHX1 559 aaKnown RBP16.23■□□□□ 0.19
GARNL3-204ENST00000429629 DACH1Q9UI36 760 aa16.23■□□□□ 0.19
GARNL3-204ENST00000429629 FRMD4BQ9Y2L6 1034 aa16.23■□□□□ 0.19
GARNL3-204ENST00000429629 BIN1O00499 593 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 CETN3O15182 167 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 ZC3H11AO75152 810 aaKnown RBP eCLIP16.22■□□□□ 0.19
GARNL3-204ENST00000429629 FGF18O76093 207 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 EFEMP2O95967 443 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 NR2F2P24468 414 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 ERCC5P28715 1186 aaPredicted RBP16.22■□□□□ 0.19
GARNL3-204ENST00000429629 PSMC2P35998 433 aaKnown RBP16.22■□□□□ 0.19
GARNL3-204ENST00000429629 SLC11A1P49279 550 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 CYP2J2P51589 502 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 AP3M2P53677 418 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 UPP1Q16831 310 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 ANKRD40Q6AI12 368 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 ISM2Q6H9L7 571 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 CBWD2Q8IUF1 395 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 KLHL23Q8NBE8 558 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 BEST2Q8NFU1 509 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 SPPL3Q8TCT6 385 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 TMC2Q8TDI7 906 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 ARNTL2Q8WYA1 636 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 KIF12Q96FN5 646 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 IGSF21Q96ID5 467 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 CEP63Q96MT8 703 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 CXCL16Q9H2A7 254 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 DNAJB4Q9UDY4 337 aa16.22■□□□□ 0.19
GARNL3-204ENST00000429629 GOLGA8IPA6NC78 632 aa16.21■□□□□ 0.19
GARNL3-204ENST00000429629 GOLGA8JA6NMD2 632 aa16.21■□□□□ 0.19
GARNL3-204ENST00000429629 IKBKBO14920 756 aa16.21■□□□□ 0.19
GARNL3-204ENST00000429629 B4GALT3O60512 393 aa16.21■□□□□ 0.19
GARNL3-204ENST00000429629 CYP24A1Q07973 514 aa16.21■□□□□ 0.19
GARNL3-204ENST00000429629 PAK1Q13153 545 aa16.21■□□□□ 0.19
GARNL3-204ENST00000429629 GPM6BQ13491 265 aa16.21■□□□□ 0.19
GARNL3-204ENST00000429629 GRIN2CQ14957 1233 aa16.21■□□□□ 0.19
GARNL3-204ENST00000429629 TMEM132DQ14C87 1099 aa16.21■□□□□ 0.19
GARNL3-204ENST00000429629 TTI2Q6NXR4 508 aa16.21■□□□□ 0.19
GARNL3-204ENST00000429629 DDX53Q86TM3 631 aaKnown RBP16.21■□□□□ 0.19
GARNL3-204ENST00000429629 ZSWIM2Q8NEG5 633 aa16.21■□□□□ 0.19
GARNL3-204ENST00000429629 PARD3BQ8TEW8 1205 aa16.21■□□□□ 0.19
GARNL3-204ENST00000429629 TMEM169Q96HH4 297 aa16.21■□□□□ 0.19
GARNL3-204ENST00000429629 MTMR10Q9NXD2 777 aa16.21■□□□□ 0.19
GARNL3-204ENST00000429629 TMEM63CQ9P1W3 806 aa16.21■□□□□ 0.19
GARNL3-204ENST00000429629 RWDD2AQ9UIY3 292 aa16.21■□□□□ 0.19
GARNL3-204ENST00000429629 MYH11P35749 1972 aa16.2■□□□□ 0.18
GARNL3-204ENST00000429629 SLC16A3O15427 465 aaKnown RBP16.2■□□□□ 0.18
GARNL3-204ENST00000429629 LPXNO60711 386 aa16.2■□□□□ 0.18
GARNL3-204ENST00000429629 FGFR1OPO95684 399 aaKnown RBP16.2■□□□□ 0.18
GARNL3-204ENST00000429629 ITGB1P05556 798 aa16.2■□□□□ 0.18
GARNL3-204ENST00000429629 OR1G1P47890 313 aa16.2■□□□□ 0.18
GARNL3-204ENST00000429629 ELAVL2Q12926 359 aaKnown RBP16.2■□□□□ 0.18
GARNL3-204ENST00000429629 PTPROQ16827 1216 aa16.2■□□□□ 0.18
GARNL3-204ENST00000429629 DUOXA2Q1HG44 320 aa16.2■□□□□ 0.18
GARNL3-204ENST00000429629 GLRA4Q5JXX5 417 aa16.2■□□□□ 0.18
GARNL3-204ENST00000429629 JADE1Q6IE81 842 aa16.2■□□□□ 0.18
GARNL3-204ENST00000429629 SASS6Q6UVJ0 657 aa16.2■□□□□ 0.18
GARNL3-204ENST00000429629 INTS8Q75QN2 995 aaKnown RBP16.2■□□□□ 0.18
GARNL3-204ENST00000429629 FILIP1Q7Z7B0 1213 aa16.2■□□□□ 0.18
GARNL3-204ENST00000429629 WDR49Q8IV35 697 aa16.2■□□□□ 0.18
GARNL3-204ENST00000429629 RNF168Q8IYW5 571 aaPredicted RBP16.2■□□□□ 0.18
GARNL3-204ENST00000429629 DEFB123Q8N688 67 aa16.2■□□□□ 0.18
GARNL3-204ENST00000429629 NELFBQ8WX92 580 aa16.2■□□□□ 0.18
GARNL3-204ENST00000429629 FNBP1Q96RU3 617 aa16.2■□□□□ 0.18
GARNL3-204ENST00000429629 HCSTQ9UBK5 93 aa16.2■□□□□ 0.18
GARNL3-204ENST00000429629 ANO9A1A5B4 782 aa16.19■□□□□ 0.18
GARNL3-204ENST00000429629 TRAPPC3O43617 180 aa16.19■□□□□ 0.18
GARNL3-204ENST00000429629 TADA2AO75478 443 aa16.19■□□□□ 0.18
GARNL3-204ENST00000429629 AKAP3O75969 853 aa16.19■□□□□ 0.18
GARNL3-204ENST00000429629 GNA14O95837 355 aa16.19■□□□□ 0.18
GARNL3-204ENST00000429629 PMS1P54277 932 aaKnown RBP16.19■□□□□ 0.18
GARNL3-204ENST00000429629 SOX4Q06945 474 aaPredicted RBP16.19■□□□□ 0.18
GARNL3-204ENST00000429629 BMS1Q14692 1282 aaKnown RBP16.19■□□□□ 0.18
GARNL3-204ENST00000429629 RDH13Q8NBN7 331 aa16.19■□□□□ 0.18
GARNL3-204ENST00000429629 MRPL38Q96DV4 380 aaKnown RBP16.19■□□□□ 0.18
GARNL3-204ENST00000429629 FAM212AQ96EL1 285 aa16.19■□□□□ 0.18
GARNL3-204ENST00000429629 BORCS6Q96GS4 357 aa16.19■□□□□ 0.18
GARNL3-204ENST00000429629 DUSP9Q99956 384 aaKnown RBP16.19■□□□□ 0.18
GARNL3-204ENST00000429629 METTL14Q9HCE5 456 aaKnown RBP16.19■□□□□ 0.18
GARNL3-204ENST00000429629 PDE11AQ9HCR9 933 aa16.19■□□□□ 0.18
GARNL3-204ENST00000429629 NGRNQ9NPE2 291 aaKnown RBP16.19■□□□□ 0.18
GARNL3-204ENST00000429629 INTS13Q9NVM9 706 aa16.19■□□□□ 0.18
GARNL3-204ENST00000429629 ANO10Q9NW15 660 aa16.19■□□□□ 0.18
GARNL3-204ENST00000429629 MARCH5Q9NX47 278 aa16.19■□□□□ 0.18
GARNL3-204ENST00000429629 ADAM28Q9UKQ2 775 aa16.19■□□□□ 0.18
GARNL3-204ENST00000429629 SSX2IPQ9Y2D8 614 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms