RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 EPHB2P29323 1055 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 CCR3P51677 355 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 RNASELQ05823 741 aaKnown RBP15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 LSAMPQ13449 338 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 TTC8Q8TAM2 541 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 PIP4K2CQ8TBX8 421 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 FAM163AQ96GL9 167 aaPredicted RBP15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 AGBL1Q96MI9 1066 aa15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 OXCT2Q9BYC2 517 aaPredicted RBP15.3■□□□□ 0.04
SYNGAP1-203ENST00000428982 ESYT2A0FGR8 921 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 TMEM221A6NGB7 291 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 GH2P01242 217 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 APOEP02649 317 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 CALCOCO2Q13137 446 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 IZUMO2Q6UXV1 221 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 GPBP1Q86WP2 473 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 KSR1Q8IVT5 923 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 PARP2Q9UGN5 583 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 DDX25Q9UHL0 483 aaKnown RBP15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 DNM3Q9UQ16 869 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 TJP1Q07157 1748 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 PP2D1A8MPX8 630 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 CASQ2O14958 399 aaPredicted RBP15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 IRX4P78413 519 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 PIGWQ7Z7B1 504 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 TUBB6Q9BUF5 446 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 ASCC2Q9H1I8 757 aaPredicted RBP15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 TMEM60Q9H2L4 133 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 REXO2Q9Y3B8 237 aaKnown RBP15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 ASNSP08243 561 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 DNAJC1Q96KC8 554 aaKnown RBP15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 AGAP3Q96P47 875 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 ZNF408Q9H9D4 720 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 BOLA2-SMG1P6H3BVE0 249 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 XRCC5P13010 732 aaKnown RBP15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 RTP1P59025 263 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 AP2B1P63010 937 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 PLS1Q14651 629 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 PARP6Q2NL67 630 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 OR52E8Q6IFG1 317 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 RFX8Q6ZV50 586 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 MICALL2Q8IY33 904 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 ZNF333Q96JL9 665 aa15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 CNOT7Q9UIV1 285 aaKnown RBP15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 DIS3Q9Y2L1 958 aaKnown RBP15.29■□□□□ 0.04
SYNGAP1-203ENST00000428982 MYH15Q9Y2K3 1946 aa15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 A0A0J9YVX5 310 aa15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 FKBP1AP62942 108 aaKnown RBP15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 COBLL1Q53SF7 1204 aa15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 SCAIQ8N9R8 606 aa15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 FAM13CQ8NE31 585 aa15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 VTI1AQ96AJ9 217 aa15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 FHDC1Q9C0D6 1143 aaPredicted RBP15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 MATN2O00339 956 aa15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 AKR1B1P15121 316 aa15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 CDK7P50613 346 aa15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 STK4Q13043 487 aa15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 PABPC1LQ4VXU2 614 aaKnown RBP15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 MAP3K21Q5TCX8 1036 aa15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 FNBP1Q96RU3 617 aa15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 ZNF70Q9UC06 446 aaPredicted RBP15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 HBS1LQ9Y450 684 aaKnown RBP15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 MYH14Q7Z406 1995 aaKnown RBP15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 TRIM64CA6NLI5 447 aa15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 SPAG7O75391 227 aa15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 FAM13AO94988 1023 aa15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 IDO1P14902 403 aa15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 RASA1P20936 1047 aa15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 SKIV2L2P42285 1042 aaKnown RBP15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 CENPPQ6IPU0 288 aa15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 KCTD1Q719H9 257 aa15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 CROCCP3Q8IVE0 287 aa15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 NELFCDQ8IXH7 590 aa15.28■□□□□ 0.04
SYNGAP1-203ENST00000428982 KLRG2A4D1S0 409 aaPredicted RBP15.27■□□□□ 0.04
SYNGAP1-203ENST00000428982 A6NJR5 290 aa15.27■□□□□ 0.04
SYNGAP1-203ENST00000428982 ZBED4O75132 1171 aa15.27■□□□□ 0.04
SYNGAP1-203ENST00000428982 BMP3P12645 472 aa15.27■□□□□ 0.04
SYNGAP1-203ENST00000428982 MKRN4PQ13434 485 aaPredicted RBP15.27■□□□□ 0.04
SYNGAP1-203ENST00000428982 DACT2Q5SW24 774 aa15.27■□□□□ 0.04
SYNGAP1-203ENST00000428982 C1orf228Q6PIY5 440 aa15.27■□□□□ 0.04
SYNGAP1-203ENST00000428982 APOBEC3FQ8IUX4 373 aaKnown RBP15.27■□□□□ 0.04
SYNGAP1-203ENST00000428982 EEF2KMTQ96G04 330 aa15.27■□□□□ 0.04
SYNGAP1-203ENST00000428982 MED15Q96RN5 788 aa15.27■□□□□ 0.04
SYNGAP1-203ENST00000428982 PACSIN2Q9UNF0 486 aaPredicted RBP15.27■□□□□ 0.04
SYNGAP1-203ENST00000428982 BIRC5O15392 142 aa15.27■□□□□ 0.04
SYNGAP1-203ENST00000428982 MGEA5O60502 916 aa15.27■□□□□ 0.04
SYNGAP1-203ENST00000428982 CETN2P41208 172 aa15.27■□□□□ 0.04
SYNGAP1-203ENST00000428982 FAM83BQ5T0W9 1011 aa15.27■□□□□ 0.04
SYNGAP1-203ENST00000428982 THSD7AQ9UPZ6 1657 aa15.27■□□□□ 0.03
SYNGAP1-203ENST00000428982 NUP188Q5SRE5 1749 aa15.27■□□□□ 0.03
SYNGAP1-203ENST00000428982 SHANK3Q9BYB0 1731 aa15.27■□□□□ 0.03
SYNGAP1-203ENST00000428982 PEX11AO75192 247 aa15.27■□□□□ 0.03
SYNGAP1-203ENST00000428982 LMNB2Q03252 620 aa15.27■□□□□ 0.03
SYNGAP1-203ENST00000428982 MMEL1Q495T6 779 aa15.27■□□□□ 0.03
SYNGAP1-203ENST00000428982 PDCD4Q53EL6 469 aaKnown RBP15.27■□□□□ 0.03
SYNGAP1-203ENST00000428982 ZNF394Q53GI3 561 aa15.27■□□□□ 0.03
SYNGAP1-203ENST00000428982 DCAF17Q5H9S7 520 aaPredicted RBP15.27■□□□□ 0.03
SYNGAP1-203ENST00000428982 FBXO11Q86XK2 927 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms