RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 EPHB4P54760 987 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 POLR2FP61218 127 aaKnown RBP10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 RAPGEF1Q13905 1077 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 DPY19L2P1Q6NXN4 242 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 SLC27A1Q6PCB7 646 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 ZPBP2Q6X784 338 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 OTOP2Q7RTS6 562 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 SRGAP1Q7Z6B7 1085 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 LPIN3Q9BQK8 851 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 UBE4BO95155 1302 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 I3L4J1 428 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 GARTP22102 1010 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 EPC2Q52LR7 807 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 NOTUMQ6P988 496 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 FRMD5Q7Z6J6 570 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 RSPH3Q86UC2 560 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 IFNLR1Q8IU57 520 aaPredicted RBP10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 SLC9A9Q8IVB4 645 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 EXOC8Q8IYI6 725 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 C7orf61Q8IZ16 206 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 GSTCDQ8NEC7 633 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 MFSD14AQ96MC6 490 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 FNBP1Q96RU3 617 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 NFKBIZQ9BYH8 718 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 ERVK-5Q9HDB9 667 aa10.31□□□□□ -0.76
HMGCLL1-206ENST00000428842 KRT13P13646 458 aa10.3□□□□□ -0.76
HMGCLL1-206ENST00000428842 TRIM21P19474 475 aaKnown RBP10.3□□□□□ -0.76
HMGCLL1-206ENST00000428842 SCNN1GP51170 649 aa10.3□□□□□ -0.76
HMGCLL1-206ENST00000428842 CDH8P55286 799 aa10.3□□□□□ -0.76
HMGCLL1-206ENST00000428842 MYL6P60660 151 aa10.3□□□□□ -0.76
HMGCLL1-206ENST00000428842 MYL7Q01449 175 aa10.3□□□□□ -0.76
HMGCLL1-206ENST00000428842 ALCAMQ13740 583 aa10.3□□□□□ -0.76
HMGCLL1-206ENST00000428842 PKN2Q16513 984 aaKnown RBP10.3□□□□□ -0.76
HMGCLL1-206ENST00000428842 ZNF394Q53GI3 561 aa10.3□□□□□ -0.76
HMGCLL1-206ENST00000428842 SPECC1LQ69YQ0 1117 aa10.3□□□□□ -0.76
HMGCLL1-206ENST00000428842 TRIM65Q6PJ69 517 aa10.3□□□□□ -0.76
HMGCLL1-206ENST00000428842 AGMOQ6ZNB7 445 aa10.3□□□□□ -0.76
HMGCLL1-206ENST00000428842 SPRED2Q7Z698 418 aa10.3□□□□□ -0.76
HMGCLL1-206ENST00000428842 MRFAP1L1Q96HT8 127 aa10.3□□□□□ -0.76
HMGCLL1-206ENST00000428842 CHP1Q99653 195 aa10.3□□□□□ -0.76
HMGCLL1-206ENST00000428842 APOBEC3GQ9HC16 384 aaKnown RBP10.3□□□□□ -0.76
HMGCLL1-206ENST00000428842 SIX2Q9NPC8 291 aa10.3□□□□□ -0.76
HMGCLL1-206ENST00000428842 FAM105AQ9NUU6 356 aa10.3□□□□□ -0.76
HMGCLL1-206ENST00000428842 POLIQ9UNA4 740 aa10.3□□□□□ -0.76
HMGCLL1-206ENST00000428842 PPME1Q9Y570 386 aa10.3□□□□□ -0.76
HMGCLL1-206ENST00000428842 CASTOR2A6NHX0 329 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 DCDC2CA8MYV0 355 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 PTGESO14684 152 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 ITGB3P05106 788 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 SELPP16109 830 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 MXI1P50539 228 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 FAM187BQ17R55 369 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 NECAB2Q7Z6G3 386 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 NME8Q8N427 588 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 C1orf127Q8N9H9 656 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 TC2NQ8N9U0 490 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 LMO3Q8TAP4 145 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 KIF12Q96FN5 646 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 SIX4Q9UIU6 781 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 NT5C1B-RDH14C9J2C7 533 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 ITGB1P05556 798 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 WEE2P0C1S8 567 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 CD58P19256 250 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 USP8P40818 1118 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 EXOC3L4Q17RC7 722 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 INTS8Q75QN2 995 aaKnown RBP10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 ANKRD33Q7Z3H0 272 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 C12orf56Q8IXR9 622 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 PPM1KQ8N3J5 372 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 HELQQ8TDG4 1101 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 HVCN1Q96D96 273 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 ACAP3Q96P50 834 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 DESI2Q9BSY9 194 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 RPF1Q9H9Y2 349 aaKnown RBP10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 PRDM10Q9NQV6 1147 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 NXF1Q9UBU9 619 aaKnown RBP10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 TBX21Q9UL17 535 aa10.29□□□□□ -0.76
HMGCLL1-206ENST00000428842 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 SOWAHDA6NJG2 315 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 LRRC53A6NM62 1247 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 H0YCG3 227 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 SLC16A3O15427 465 aaKnown RBP10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 ABL1P00519 1130 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 CLTBP09497 229 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 PPP1R2P41236 205 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 MARSP56192 900 aaKnown RBP10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 BCAR1P56945 870 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 DEFB103AP81534 67 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 FILIP1LQ4L180 1135 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 CT47A1Q5JQC4 288 aaPredicted RBP10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 SLFN12LQ6IEE8 588 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 IQCEQ6IPM2 695 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 C16orf59Q7L2K0 433 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 ZNF280BQ86YH2 543 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 FAM114A1Q8IWE2 563 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 BRSK2Q8IWQ3 736 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 C3orf58Q8NDZ4 430 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 ANKRD20A12PQ8NF67 263 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 GOLGA5Q8TBA6 731 aa10.28□□□□□ -0.76
HMGCLL1-206ENST00000428842 B3GALT6Q96L58 329 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms