RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 MCPH1Q8NEM0 835 aa12.27□□□□□ -0.45
CECR3-201ENST00000428828 CCT6BQ92526 530 aa12.27□□□□□ -0.45
CECR3-201ENST00000428828 MED15Q96RN5 788 aa12.27□□□□□ -0.45
CECR3-201ENST00000428828 FAM49AQ9H0Q0 323 aaPredicted RBP12.27□□□□□ -0.45
CECR3-201ENST00000428828 SAMSN1Q9NSI8 373 aaKnown RBP12.27□□□□□ -0.45
CECR3-201ENST00000428828 GTF2IRD1Q9UHL9 959 aa12.27□□□□□ -0.45
CECR3-201ENST00000428828 AKT3Q9Y243 479 aa12.27□□□□□ -0.45
CECR3-201ENST00000428828 KRT86O43790 486 aa12.26□□□□□ -0.45
CECR3-201ENST00000428828 SKAP2O75563 359 aaPredicted RBP12.26□□□□□ -0.45
CECR3-201ENST00000428828 CYP2C9P11712 490 aa12.26□□□□□ -0.45
CECR3-201ENST00000428828 VAV2P52735 878 aa12.26□□□□□ -0.45
CECR3-201ENST00000428828 GUCY1A3Q02108 690 aa12.26□□□□□ -0.45
CECR3-201ENST00000428828 SPAG1Q07617 926 aa12.26□□□□□ -0.45
CECR3-201ENST00000428828 MAPK7Q13164 816 aa12.26□□□□□ -0.45
CECR3-201ENST00000428828 ZNF268Q14587 947 aaPredicted RBP12.26□□□□□ -0.45
CECR3-201ENST00000428828 CMPK2Q5EBM0 449 aa12.26□□□□□ -0.45
CECR3-201ENST00000428828 HERC4Q5GLZ8 1057 aaPredicted RBP12.26□□□□□ -0.45
CECR3-201ENST00000428828 CFAP58Q5T655 872 aa12.26□□□□□ -0.45
CECR3-201ENST00000428828 COL13A1Q5TAT6 717 aaPredicted RBP12.26□□□□□ -0.45
CECR3-201ENST00000428828 RUFY4Q6ZNE9 571 aa12.26□□□□□ -0.45
CECR3-201ENST00000428828 CACNA2D3Q8IZS8 1091 aa12.26□□□□□ -0.45
CECR3-201ENST00000428828 DAW1Q8N136 415 aa12.26□□□□□ -0.45
CECR3-201ENST00000428828 TSEN2Q8NCE0 465 aaKnown RBP12.26□□□□□ -0.45
CECR3-201ENST00000428828 DTNBP1Q96EV8 351 aa12.26□□□□□ -0.45
CECR3-201ENST00000428828 PDLIM7Q9NR12 457 aa12.26□□□□□ -0.45
CECR3-201ENST00000428828 TRMT13Q9NUP7 481 aaKnown RBP12.26□□□□□ -0.45
CECR3-201ENST00000428828 STIM2Q9P246 746 aa12.26□□□□□ -0.45
CECR3-201ENST00000428828 LIMA1Q9UHB6 759 aaKnown RBP12.26□□□□□ -0.45
CECR3-201ENST00000428828 REXO2Q9Y3B8 237 aaKnown RBP12.26□□□□□ -0.45
CECR3-201ENST00000428828 MAGEB2O15479 319 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 ANP32DO95626 131 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 ABL1P00519 1130 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 VTNP04004 478 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 GNAT1P11488 350 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 MNX1P50219 401 aaPredicted RBP12.25□□□□□ -0.45
CECR3-201ENST00000428828 TMEM62Q0P6H9 643 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 ACCSLQ4AC99 568 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 ODR4Q5SWX8 454 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 RHPN2Q8IUC4 686 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 KSR1Q8IVT5 923 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 GSPT2Q8IYD1 628 aaKnown RBP12.25□□□□□ -0.45
CECR3-201ENST00000428828 SMYD4Q8IYR2 804 aaPredicted RBP12.25□□□□□ -0.45
CECR3-201ENST00000428828 GALNT15Q8N3T1 639 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 CCDC155Q8N6L0 562 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 CAGE1Q8TC20 777 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 ASAP3Q8TDY4 903 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 BSNDQ8WZ55 320 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 GDAP1L1Q96MZ0 367 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 PARVGQ9HBI0 331 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 NOD1Q9Y239 953 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 PPME1Q9Y570 386 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 COL4A3BPQ9Y5P4 624 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 ALPK3Q96L96 1907 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 IGKV6-21A0A0C4DH24 114 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 CCDC169A6NNP5 214 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 E7EVH7 732 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 RBAK-RBAKDNI3L0D1 243 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 PEX19P40855 299 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 DNM2P50570 870 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 PEX3P56589 373 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 MYO1EQ12965 1108 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 PSMD2Q13200 908 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 TRIM74Q86UV6 250 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 TRIM73Q86UV7 250 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 EXOC8Q8IYI6 725 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 GLIS3Q8NEA6 775 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 KIFAP3Q92845 792 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 PAWRQ96IZ0 340 aaKnown RBP12.25□□□□□ -0.45
CECR3-201ENST00000428828 SEC16BQ96JE7 1060 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 GSDMAQ96QA5 445 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 KIFC3Q9BVG8 833 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 TIPINQ9BVW5 301 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 FGFBP2Q9BYJ0 223 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 PAPOLBQ9NRJ5 636 aaKnown RBP12.25□□□□□ -0.45
CECR3-201ENST00000428828 RMND1Q9NWS8 449 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 SUCLA2Q9P2R7 463 aaPredicted RBP12.25□□□□□ -0.45
CECR3-201ENST00000428828 GUCA1BQ9UMX6 200 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 MAPK8IP1Q9UQF2 711 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 GDAQ9Y2T3 454 aa12.25□□□□□ -0.45
CECR3-201ENST00000428828 MKI67P46013 3256 aaKnown RBP12.24□□□□□ -0.45
CECR3-201ENST00000428828 PVALEFA0A1B0GWK0 134 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 LRRIQ4A6NIV6 560 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 ZNF233A6NK53 670 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 ENO4A6NNW6 628 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 K7ENM7 598 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 PDE2AO00408 941 aaPredicted RBP12.24□□□□□ -0.45
CECR3-201ENST00000428828 CCND1P24385 295 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 TMOD1P28289 359 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 ATP1A2P50993 1020 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 ADAM17P78536 824 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 DMP1Q13316 513 aaPredicted RBP12.24□□□□□ -0.45
CECR3-201ENST00000428828 IER5Q5VY09 327 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 CNNM4Q6P4Q7 775 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 CREG2Q8IUH2 290 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 FAM178BQ8IXR5 827 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 DNAJB3Q8WWF6 145 aa12.24□□□□□ -0.45
CECR3-201ENST00000428828 PRPF31Q8WWY3 499 aaKnown RBP12.24□□□□□ -0.45
CECR3-201ENST00000428828 PSPC1Q8WXF1 523 aaKnown RBP12.24□□□□□ -0.45
CECR3-201ENST00000428828 EZH1Q92800 747 aaPredicted RBP12.24□□□□□ -0.45
CECR3-201ENST00000428828 HVCN1Q96D96 273 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms