RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 HLA-DRAP01903 254 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 ACTN1P12814 892 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 PAX3P23760 479 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 PIK3CAP42336 1068 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 BPIFB4P59827 614 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 YWHAEP62258 255 aaKnown RBP9.78□□□□□ -0.84
NR1I3-209ENST00000428574 KLHL30Q0D2K2 578 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 NCOA4Q13772 614 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 DRAP1Q14919 205 aaPredicted RBP9.78□□□□□ -0.84
NR1I3-209ENST00000428574 SPA17Q15506 151 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 SLC18A3Q16572 532 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 SGSM1Q2NKQ1 1148 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 TRIM71Q2Q1W2 868 aaKnown RBP9.78□□□□□ -0.84
NR1I3-209ENST00000428574 XKR4Q5GH76 650 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 C1orf53Q5VUE5 145 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 TDRD10Q5VZ19 366 aaKnown RBP9.78□□□□□ -0.84
NR1I3-209ENST00000428574 PHLDB3Q6NSJ2 640 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 PPP1R2P3Q6NXS1 205 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 RAD9BQ6WBX8 426 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 NYAP1Q6ZVC0 841 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 TRAPPC11Q7Z392 1133 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 IRF2BP2Q7Z5L9 587 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 ZBTB33Q86T24 672 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 ZNF677Q86XU0 584 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 FAM71AQ8IYT1 594 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 ANKLE1Q8NAG6 615 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 HELQQ8TDG4 1101 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 TAS1R2Q8TE23 839 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 UBE2Q2Q8WVN8 375 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 ZNF516Q92618 1163 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 PPP1R13BQ96KQ4 1090 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 CALR3Q96L12 384 aaKnown RBP9.78□□□□□ -0.84
NR1I3-209ENST00000428574 SNX27Q96L92 541 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 ACAP3Q96P50 834 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 DEF6Q9H4E7 631 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 STARD7Q9NQZ5 370 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 CNTN3Q9P232 1028 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 ARHGAP20Q9P2F6 1191 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 INTUQ9ULD6 942 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 CNTN6Q9UQ52 1028 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 NOD1Q9Y239 953 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 CDY2AQ9Y6F7 541 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 RALGAPA2Q2PPJ7 1873 aa9.78□□□□□ -0.84
NR1I3-209ENST00000428574 BTNL10A8MVZ5 291 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 KRT86O43790 486 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 EVI5O60447 810 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 RPS6KA5O75582 802 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 VNN1O95497 513 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 P4HA1P13674 534 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 KCNE1P15382 129 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 CYP3A5P20815 502 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 TNFSF9P41273 254 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 CDK7P50613 346 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 KIF11P52732 1056 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 CHMP4BP1P59074 171 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 ZNF200P98182 395 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-209ENST00000428574 GOLGA8FQ08AF8 430 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 GOLGA8DPQ0D2H9 430 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 BIRC3Q13489 604 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 PTPN14Q15678 1187 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 TDRD12Q587J7 1177 aaKnown RBP9.77□□□□□ -0.85
NR1I3-209ENST00000428574 FAM47CQ5HY64 1035 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 ZBTB41Q5SVQ8 909 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 FBXO46Q6PJ61 603 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-209ENST00000428574 ALKAL1Q6UXT8 129 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-209ENST00000428574 CTU1Q7Z7A3 348 aaKnown RBP9.77□□□□□ -0.85
NR1I3-209ENST00000428574 FAM228AQ86W67 206 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 REXO1L1PQ8IX06 675 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 THNSL1Q8IYQ7 743 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 LRRC52Q8N7C0 313 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 DNAJC5GQ8N7S2 189 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 TMEM40Q8WWA1 233 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 ARMC5Q96C12 935 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 CHP1Q99653 195 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 TRIM6Q9C030 488 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-209ENST00000428574 GPR88Q9GZN0 384 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 NIF3L1Q9GZT8 377 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 CRISPLD2Q9H0B8 497 aa9.77□□□□□ -0.85
NR1I3-209ENST00000428574 UBE2TQ9NPD8 197 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-209ENST00000428574 PIN4Q9Y237 131 aaKnown RBP9.77□□□□□ -0.85
NR1I3-209ENST00000428574 PJA2O43164 708 aa9.76□□□□□ -0.85
NR1I3-209ENST00000428574 AKR1B10O60218 316 aa9.76□□□□□ -0.85
NR1I3-209ENST00000428574 ZNF623O75123 536 aa9.76□□□□□ -0.85
NR1I3-209ENST00000428574 PHACTR2O75167 634 aa9.76□□□□□ -0.85
NR1I3-209ENST00000428574 CXCL8P10145 99 aa9.76□□□□□ -0.85
NR1I3-209ENST00000428574 HARSP12081 509 aaKnown RBP9.76□□□□□ -0.85
NR1I3-209ENST00000428574 EIF4A3P38919 411 aaKnown RBP9.76□□□□□ -0.85
NR1I3-209ENST00000428574 VAV2P52735 878 aa9.76□□□□□ -0.85
NR1I3-209ENST00000428574 NOP14P78316 857 aaKnown RBP9.76□□□□□ -0.85
NR1I3-209ENST00000428574 TRPC3Q13507 836 aa9.76□□□□□ -0.85
NR1I3-209ENST00000428574 BFSP2Q13515 415 aa9.76□□□□□ -0.85
NR1I3-209ENST00000428574 CUL2Q13617 745 aa9.76□□□□□ -0.85
NR1I3-209ENST00000428574 TMEM132DQ14C87 1099 aa9.76□□□□□ -0.85
NR1I3-209ENST00000428574 SLC10A6Q3KNW5 377 aa9.76□□□□□ -0.85
NR1I3-209ENST00000428574 FBXO47Q5MNV8 452 aa9.76□□□□□ -0.85
NR1I3-209ENST00000428574 TOGARAM2Q6ZUX3 1019 aa9.76□□□□□ -0.85
NR1I3-209ENST00000428574 ARHGEF19Q8IW93 802 aa9.76□□□□□ -0.85
NR1I3-209ENST00000428574 EFCAB13Q8IY85 973 aa9.76□□□□□ -0.85
NR1I3-209ENST00000428574 PPM1KQ8N3J5 372 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms