RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 OGTO15294 1046 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 C22orf31O95567 290 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 MCM3P25205 808 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 TFDP1Q14186 410 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 CASP8Q14790 479 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 ATF7IP2Q5U623 682 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 EEF1DP3Q658K8 133 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 TMEM270Q6UE05 265 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 BRSK2Q8IWQ3 736 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 RHOT2Q8IXI1 618 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 ABRAQ8N0Z2 381 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 PPTC7Q8NI37 304 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 PPP1R13LQ8WUF5 828 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 HES6Q96HZ4 224 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 MAML3Q96JK9 1138 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 PBKQ96KB5 322 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 PARK7Q99497 189 aaKnown RBP11.17□□□□□ -0.62
HDAC9-210ENST00000428307 SELENOOQ9BVL4 669 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 MTMR12Q9C0I1 747 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 C2orf40Q9H1Z8 148 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 AKT3Q9Y243 479 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 NUB1Q9Y5A7 615 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 A0A087WZ62 844 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 ZSCAN5CA6NGD5 496 aaPredicted RBP11.17□□□□□ -0.62
HDAC9-210ENST00000428307 H3BRB1 525 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 ACKR2O00590 384 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 VTNP04004 478 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 ZBTB48P10074 688 aaPredicted RBP11.17□□□□□ -0.62
HDAC9-210ENST00000428307 SMPD1P17405 629 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 TNNT3P45378 269 aaPredicted RBP11.17□□□□□ -0.62
HDAC9-210ENST00000428307 HUNKP57058 714 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 PTENP60484 403 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 NOP14P78316 857 aaKnown RBP11.17□□□□□ -0.62
HDAC9-210ENST00000428307 TFAMQ00059 246 aaKnown RBP11.17□□□□□ -0.62
HDAC9-210ENST00000428307 MCL1Q07820 350 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 CUL2Q13617 745 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 SMC1AQ14683 1233 aaKnown RBP11.17□□□□□ -0.62
HDAC9-210ENST00000428307 MESDQ14696 234 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 ZNF568Q3ZCX4 644 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 C2CD6Q53TS8 623 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 PRAMEF19Q5SWL8 479 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 PLEKHH3Q7Z736 793 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 PHLDB2Q86SQ0 1253 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 BTBD6Q96KE9 485 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 FDXACB1Q9BRP7 624 aaPredicted RBP11.17□□□□□ -0.62
HDAC9-210ENST00000428307 TINF2Q9BSI4 451 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 C16orf70Q9BSU1 422 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 KATNBL1Q9H079 304 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 FZD8Q9H461 694 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 TUT1Q9H6E5 874 aaKnown RBP11.17□□□□□ -0.62
HDAC9-210ENST00000428307 ZCCHC17Q9NP64 241 aaKnown RBP11.17□□□□□ -0.62
HDAC9-210ENST00000428307 STIM2Q9P246 746 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 PCDHB4Q9Y5E5 795 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 SCN4AP35499 1836 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 ESYT3A0FGR9 886 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 ABLIM1O14639 778 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 PPFIA4O75335 1185 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 GLI1P08151 1106 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 MBTD1Q05BQ5 628 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 ZNF211Q13398 564 aaPredicted RBP11.16□□□□□ -0.62
HDAC9-210ENST00000428307 ACVR2BQ13705 512 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 GRB14Q14449 540 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 FAM110CQ1W6H9 321 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 TMEM192Q8IY95 271 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 NPLOC4Q8TAT6 608 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 CPA5Q8WXQ8 436 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 ZNF653Q96CK0 615 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 IFT122Q9HBG6 1241 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 PCDHB2Q9Y5E7 798 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 PGRMC1O00264 195 aaKnown RBP11.16□□□□□ -0.62
HDAC9-210ENST00000428307 POLR3GO15318 223 aaPredicted RBP11.16□□□□□ -0.62
HDAC9-210ENST00000428307 CFHP08603 1231 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 ACO1P21399 889 aaKnown RBP11.16□□□□□ -0.62
HDAC9-210ENST00000428307 MYL6P60660 151 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 ZNF484Q5JVG2 852 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 MPZL3Q6UWV2 235 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 TSHZ1Q6ZSZ6 1077 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 ADAT2Q7Z6V5 191 aaKnown RBP11.16□□□□□ -0.62
HDAC9-210ENST00000428307 PASD1Q8IV76 773 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 ACTRT1Q8TDG2 376 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.16□□□□□ -0.62
HDAC9-210ENST00000428307 NUP85Q9BW27 656 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 IMPG2Q9BZV3 1241 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 NMRK2Q9NPI5 230 aa11.16□□□□□ -0.62
HDAC9-210ENST00000428307 CPSF3Q9UKF6 684 aaKnown RBP11.16□□□□□ -0.62
HDAC9-210ENST00000428307 NOC2LQ9Y3T9 749 aaKnown RBP11.16□□□□□ -0.62
HDAC9-210ENST00000428307 A0A0U1RQG5 324 aaPredicted RBP11.15□□□□□ -0.62
HDAC9-210ENST00000428307 RBM47A0AV96 593 aaKnown RBP11.15□□□□□ -0.62
HDAC9-210ENST00000428307 KRIT1O00522 736 aa11.15□□□□□ -0.62
HDAC9-210ENST00000428307 CES2O00748 559 aa11.15□□□□□ -0.62
HDAC9-210ENST00000428307 ADCY6O43306 1168 aa11.15□□□□□ -0.62
HDAC9-210ENST00000428307 CLTAP09496 248 aa11.15□□□□□ -0.62
HDAC9-210ENST00000428307 ITGA4P13612 1032 aa11.15□□□□□ -0.62
HDAC9-210ENST00000428307 GUCY2DQ02846 1103 aa11.15□□□□□ -0.62
HDAC9-210ENST00000428307 DUOXA2Q1HG44 320 aa11.15□□□□□ -0.62
HDAC9-210ENST00000428307 MAP9Q49MG5 647 aa11.15□□□□□ -0.62
HDAC9-210ENST00000428307 NAA35Q5VZE5 725 aa11.15□□□□□ -0.62
HDAC9-210ENST00000428307 ACAD10Q6JQN1 1059 aa11.15□□□□□ -0.62
HDAC9-210ENST00000428307 ZNF467Q7Z7K2 595 aaPredicted RBP11.15□□□□□ -0.62
HDAC9-210ENST00000428307 CPNE8Q86YQ8 564 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms