RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 CRELD2Q6UXH1 353 aaPredicted RBP27.35■■□□□ 1.97
HERPUD2-205ENST00000427455 TMC7Q7Z402 723 aa27.35■■□□□ 1.97
HERPUD2-205ENST00000427455 VPS52Q8N1B4 723 aa27.35■■□□□ 1.97
HERPUD2-205ENST00000427455 SAAL1Q96ER3 474 aa27.35■■□□□ 1.97
HERPUD2-205ENST00000427455 GBP4Q96PP9 640 aa27.35■■□□□ 1.97
HERPUD2-205ENST00000427455 FAM213AQ9BRX8 229 aa27.35■■□□□ 1.97
HERPUD2-205ENST00000427455 ZBP1Q9H171 429 aa27.35■■□□□ 1.97
HERPUD2-205ENST00000427455 AGPAT3Q9NRZ7 376 aa27.35■■□□□ 1.97
HERPUD2-205ENST00000427455 RMND1Q9NWS8 449 aa27.35■■□□□ 1.97
HERPUD2-205ENST00000427455 CGNQ9P2M7 1197 aaKnown RBP27.35■■□□□ 1.97
HERPUD2-205ENST00000427455 ADAM28Q9UKQ2 775 aa27.35■■□□□ 1.97
HERPUD2-205ENST00000427455 EXTL3O43909 919 aa27.34■■□□□ 1.97
HERPUD2-205ENST00000427455 KIF4AO95239 1232 aa27.34■■□□□ 1.97
HERPUD2-205ENST00000427455 SMC2O95347 1197 aa27.34■■□□□ 1.97
HERPUD2-205ENST00000427455 SOX4Q06945 474 aaPredicted RBP27.34■■□□□ 1.97
HERPUD2-205ENST00000427455 SMC1AQ14683 1233 aaKnown RBP27.34■■□□□ 1.97
HERPUD2-205ENST00000427455 BMS1Q14692 1282 aaKnown RBP27.34■■□□□ 1.97
HERPUD2-205ENST00000427455 RABGGTAQ92696 567 aa27.34■■□□□ 1.97
HERPUD2-205ENST00000427455 KIF12Q96FN5 646 aa27.34■■□□□ 1.97
HERPUD2-205ENST00000427455 PCIF1Q9H4Z3 704 aa27.34■■□□□ 1.97
HERPUD2-205ENST00000427455 ASB7Q9H672 318 aa27.34■■□□□ 1.97
HERPUD2-205ENST00000427455 GOLGA2P5Q9HBQ8 144 aa27.34■■□□□ 1.97
HERPUD2-205ENST00000427455 PCDHGC5Q9Y5F6 944 aa27.34■■□□□ 1.97
HERPUD2-205ENST00000427455 PRUNE2Q8WUY3 3088 aa27.34■■□□□ 1.97
HERPUD2-205ENST00000427455 TMEM189-UBE2V1I3L0A0 370 aa27.33■■□□□ 1.97
HERPUD2-205ENST00000427455 KIF20AO95235 890 aa27.33■■□□□ 1.97
HERPUD2-205ENST00000427455 SKIV2LQ15477 1246 aaKnown RBP27.33■■□□□ 1.97
HERPUD2-205ENST00000427455 FUT10Q6P4F1 479 aa27.33■■□□□ 1.97
HERPUD2-205ENST00000427455 GPD1LQ8N335 351 aa27.33■■□□□ 1.97
HERPUD2-205ENST00000427455 GOLGA5Q8TBA6 731 aa27.33■■□□□ 1.97
HERPUD2-205ENST00000427455 C18orf25Q96B23 403 aaPredicted RBP27.33■■□□□ 1.97
HERPUD2-205ENST00000427455 FAM212AQ96EL1 285 aa27.33■■□□□ 1.97
HERPUD2-205ENST00000427455 DDX27Q96GQ7 796 aaKnown RBP27.33■■□□□ 1.97
HERPUD2-205ENST00000427455 GSDMAQ96QA5 445 aa27.33■■□□□ 1.97
HERPUD2-205ENST00000427455 HERC2P3Q9BVR0 1158 aa27.33■■□□□ 1.97
HERPUD2-205ENST00000427455 HSPBP1Q9NZL4 362 aa27.33■■□□□ 1.97
HERPUD2-205ENST00000427455 UBQLN1Q9UMX0 589 aaKnown RBP27.33■■□□□ 1.97
HERPUD2-205ENST00000427455 ANK1P16157 1881 aa27.33■■□□□ 1.97
HERPUD2-205ENST00000427455 SF3B1O75533 1304 aaKnown RBP eCLIP27.33■■□□□ 1.978e-6■■■■■ 107
HERPUD2-205ENST00000427455 XPOTO43592 962 aaKnown RBP27.32■■□□□ 1.96
HERPUD2-205ENST00000427455 TADA2AO75478 443 aa27.32■■□□□ 1.96
HERPUD2-205ENST00000427455 EFEMP2O95967 443 aa27.32■■□□□ 1.96
HERPUD2-205ENST00000427455 SOD2P04179 222 aa27.32■■□□□ 1.96
HERPUD2-205ENST00000427455 CTSAP10619 480 aa27.32■■□□□ 1.96
HERPUD2-205ENST00000427455 CLCNKBP51801 687 aa27.32■■□□□ 1.96
HERPUD2-205ENST00000427455 SPAG1Q07617 926 aa27.32■■□□□ 1.96
HERPUD2-205ENST00000427455 UPP1Q16831 310 aa27.32■■□□□ 1.96
HERPUD2-205ENST00000427455 BRSK2Q8IWQ3 736 aa27.32■■□□□ 1.96
HERPUD2-205ENST00000427455 RNF168Q8IYW5 571 aaPredicted RBP27.32■■□□□ 1.96
HERPUD2-205ENST00000427455 ZSWIM2Q8NEG5 633 aa27.32■■□□□ 1.96
HERPUD2-205ENST00000427455 SPATA20Q8TB22 786 aa27.32■■□□□ 1.96
HERPUD2-205ENST00000427455 SMARCE1Q969G3 411 aa27.32■■□□□ 1.96
HERPUD2-205ENST00000427455 TUBGCP4Q9UGJ1 667 aa27.32■■□□□ 1.96
HERPUD2-205ENST00000427455 DERAQ9Y315 318 aa27.32■■□□□ 1.96
HERPUD2-205ENST00000427455 IL18RAPO95256 599 aa27.31■■□□□ 1.96
HERPUD2-205ENST00000427455 CYP3A5P20815 502 aa27.31■■□□□ 1.96
HERPUD2-205ENST00000427455 RPL9P32969 192 aaKnown RBP27.31■■□□□ 1.96
HERPUD2-205ENST00000427455 ZBTB6Q15916 424 aa27.31■■□□□ 1.96
HERPUD2-205ENST00000427455 JADE1Q6IE81 842 aa27.31■■□□□ 1.96
HERPUD2-205ENST00000427455 DCLRE1AQ6PJP8 1040 aa27.31■■□□□ 1.96
HERPUD2-205ENST00000427455 ADGRD2Q7Z7M1 963 aa27.31■■□□□ 1.96
HERPUD2-205ENST00000427455 C12orf56Q8IXR9 622 aa27.31■■□□□ 1.96
HERPUD2-205ENST00000427455 HASPINQ8TF76 798 aa27.31■■□□□ 1.96
HERPUD2-205ENST00000427455 KIAA1586Q9HCI6 787 aa27.31■■□□□ 1.96
HERPUD2-205ENST00000427455 RBAKQ9NYW8 714 aaPredicted RBP27.31■■□□□ 1.96
HERPUD2-205ENST00000427455 C2CD2Q9Y426 696 aa27.31■■□□□ 1.96
HERPUD2-205ENST00000427455 PCDHA5Q9Y5H7 936 aa27.31■■□□□ 1.96
HERPUD2-205ENST00000427455 GOLGA8IPA6NC78 632 aa27.3■■□□□ 1.96
HERPUD2-205ENST00000427455 GOLGA8JA6NMD2 632 aa27.3■■□□□ 1.96
HERPUD2-205ENST00000427455 PODXLO00592 558 aa27.3■■□□□ 1.96
HERPUD2-205ENST00000427455 B3GAT3O94766 335 aa27.3■■□□□ 1.96
HERPUD2-205ENST00000427455 HYAL1Q12794 435 aa27.3■■□□□ 1.96
HERPUD2-205ENST00000427455 TMEM132DQ14C87 1099 aa27.3■■□□□ 1.96
HERPUD2-205ENST00000427455 MRPL43Q8N983 215 aaKnown RBP27.3■■□□□ 1.96
HERPUD2-205ENST00000427455 NOC3LQ8WTT2 800 aaKnown RBP27.3■■□□□ 1.96
HERPUD2-205ENST00000427455 KCTD10Q9H3F6 313 aa27.3■■□□□ 1.96
HERPUD2-205ENST00000427455 IRAK3Q9Y616 596 aa27.3■■□□□ 1.96
HERPUD2-205ENST00000427455 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.29■■□□□ 1.96
HERPUD2-205ENST00000427455 FSD2A1L4K1 749 aa27.29■■□□□ 1.96
HERPUD2-205ENST00000427455 C2orf71A6NGG8 1288 aa27.29■■□□□ 1.96
HERPUD2-205ENST00000427455 HIDE1A8MVS5 230 aa27.29■■□□□ 1.96
HERPUD2-205ENST00000427455 CLIC2O15247 247 aa27.29■■□□□ 1.96
HERPUD2-205ENST00000427455 NCK2O43639 380 aa27.29■■□□□ 1.96
HERPUD2-205ENST00000427455 URODP06132 367 aa27.29■■□□□ 1.96
HERPUD2-205ENST00000427455 NFICP08651 508 aa27.29■■□□□ 1.96
HERPUD2-205ENST00000427455 CA8P35219 290 aa27.29■■□□□ 1.96
HERPUD2-205ENST00000427455 ELAVL2Q12926 359 aaKnown RBP27.29■■□□□ 1.96
HERPUD2-205ENST00000427455 PTPN14Q15678 1187 aa27.29■■□□□ 1.96
HERPUD2-205ENST00000427455 GUF1Q8N442 669 aaKnown RBP27.29■■□□□ 1.96
HERPUD2-205ENST00000427455 ERCC4Q92889 916 aaPredicted RBP27.29■■□□□ 1.96
HERPUD2-205ENST00000427455 FBXL18Q96ME1 805 aa27.29■■□□□ 1.96
HERPUD2-205ENST00000427455 GPR62Q9BZJ7 368 aa27.29■■□□□ 1.96
HERPUD2-205ENST00000427455 PDXKO00764 312 aa27.28■■□□□ 1.96
HERPUD2-205ENST00000427455 CXCL14O95715 111 aa27.28■■□□□ 1.96
HERPUD2-205ENST00000427455 LRPAP1P30533 357 aa27.28■■□□□ 1.96
HERPUD2-205ENST00000427455 NRIP1P48552 1158 aa27.28■■□□□ 1.96
HERPUD2-205ENST00000427455 CYP2J2P51589 502 aa27.28■■□□□ 1.96
HERPUD2-205ENST00000427455 COL19A1Q14993 1142 aa27.28■■□□□ 1.96
HERPUD2-205ENST00000427455 NT5DC4Q86YG4 428 aa27.28■■□□□ 1.96
HERPUD2-205ENST00000427455 XXYLT1Q8NBI6 393 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms