RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 SRRTQ9BXP5 876 aaKnown RBP26.12■■□□□ 1.77
APOE-202ENST00000425718 KIAA1671Q9BY89 1806 aa26.11■■□□□ 1.77
APOE-202ENST00000425718 PTGESO14684 152 aa26.11■■□□□ 1.77
APOE-202ENST00000425718 AKAP3O75969 853 aa26.11■■□□□ 1.77
APOE-202ENST00000425718 POMCP01189 267 aa26.11■■□□□ 1.77
APOE-202ENST00000425718 MYL5Q02045 173 aa26.11■■□□□ 1.77
APOE-202ENST00000425718 CCDC40Q4G0X9 1142 aa26.11■■□□□ 1.77
APOE-202ENST00000425718 TMCO2Q7Z6W1 182 aaPredicted RBP26.11■■□□□ 1.77
APOE-202ENST00000425718 GSTCDQ8NEC7 633 aa26.11■■□□□ 1.77
APOE-202ENST00000425718 DDX27Q96GQ7 796 aaKnown RBP26.11■■□□□ 1.77
APOE-202ENST00000425718 ANKRD36BP1Q96IX9 119 aa26.11■■□□□ 1.77
APOE-202ENST00000425718 PPP1R10Q96QC0 940 aaKnown RBP26.11■■□□□ 1.77
APOE-202ENST00000425718 MAGEC2Q9UBF1 373 aaPredicted RBP26.11■■□□□ 1.77
APOE-202ENST00000425718 ARMCX3Q9UH62 379 aaPredicted RBP26.11■■□□□ 1.77
APOE-202ENST00000425718 IKBKBO14920 756 aa26.1■■□□□ 1.77
APOE-202ENST00000425718 PAX3P23760 479 aa26.1■■□□□ 1.77
APOE-202ENST00000425718 RPL9P32969 192 aaKnown RBP26.1■■□□□ 1.77
APOE-202ENST00000425718 PPM1AP35813 382 aa26.1■■□□□ 1.77
APOE-202ENST00000425718 CASP4P49662 377 aa26.1■■□□□ 1.77
APOE-202ENST00000425718 GATMP50440 423 aa26.1■■□□□ 1.77
APOE-202ENST00000425718 BFSP1Q12934 665 aa26.1■■□□□ 1.77
APOE-202ENST00000425718 LRSAM1Q6UWE0 723 aa26.1■■□□□ 1.77
APOE-202ENST00000425718 CLP1Q92989 425 aaKnown RBP26.1■■□□□ 1.77
APOE-202ENST00000425718 CGRRF1Q99675 332 aa26.1■■□□□ 1.77
APOE-202ENST00000425718 PBX4Q9BYU1 374 aa26.1■■□□□ 1.77
APOE-202ENST00000425718 STK39Q9UEW8 545 aa26.1■■□□□ 1.77
APOE-202ENST00000425718 R3HCC1Q9Y3T6 440 aaKnown RBP26.1■■□□□ 1.77
APOE-202ENST00000425718 PCDHB12Q9Y5F1 795 aa26.1■■□□□ 1.77
APOE-202ENST00000425718 TNNC2P02585 160 aa26.09■■□□□ 1.77
APOE-202ENST00000425718 TMEM191BP0C7N4 346 aa26.09■■□□□ 1.77
APOE-202ENST00000425718 TNNI1P19237 187 aa26.09■■□□□ 1.77
APOE-202ENST00000425718 ALDH7A1P49419 539 aaKnown RBP26.09■■□□□ 1.77
APOE-202ENST00000425718 ZNF165P49910 485 aa26.09■■□□□ 1.77
APOE-202ENST00000425718 VAMP7P51809 220 aa26.09■■□□□ 1.77
APOE-202ENST00000425718 RABGGTBP53611 331 aa26.09■■□□□ 1.77
APOE-202ENST00000425718 MARSP56192 900 aaKnown RBP26.09■■□□□ 1.77
APOE-202ENST00000425718 DSC1Q08554 894 aa26.09■■□□□ 1.77
APOE-202ENST00000425718 DUOXA2Q1HG44 320 aa26.09■■□□□ 1.77
APOE-202ENST00000425718 JADE1Q6IE81 842 aa26.09■■□□□ 1.77
APOE-202ENST00000425718 C11orf57Q6ZUT1 292 aaPredicted RBP26.09■■□□□ 1.77
APOE-202ENST00000425718 ZSWIM2Q8NEG5 633 aa26.09■■□□□ 1.77
APOE-202ENST00000425718 PARD3BQ8TEW8 1205 aa26.09■■□□□ 1.77
APOE-202ENST00000425718 PLVAPQ9BX97 442 aa26.09■■□□□ 1.77
APOE-202ENST00000425718 PDE11AQ9HCR9 933 aa26.09■■□□□ 1.77
APOE-202ENST00000425718 MYO9BQ13459 2157 aa26.08■■□□□ 1.77
APOE-202ENST00000425718 TMEM265A0A087WTH1 108 aa26.08■■□□□ 1.77
APOE-202ENST00000425718 BECN2A8MW95 431 aa26.08■■□□□ 1.77
APOE-202ENST00000425718 GRXCR1A8MXD5 290 aa26.08■■□□□ 1.77
APOE-202ENST00000425718 ALDH2P05091 517 aa26.08■■□□□ 1.77
APOE-202ENST00000425718 DLATP10515 647 aaKnown RBP26.08■■□□□ 1.77
APOE-202ENST00000425718 MCCD1P59942 119 aaPredicted RBP26.08■■□□□ 1.77
APOE-202ENST00000425718 TPM4P67936 248 aa26.08■■□□□ 1.77
APOE-202ENST00000425718 ANKRD20A12PQ8NF67 263 aa26.08■■□□□ 1.77
APOE-202ENST00000425718 ZNF558Q96NG5 402 aa26.08■■□□□ 1.77
APOE-202ENST00000425718 SLC28A3Q9HAS3 691 aa26.08■■□□□ 1.77
APOE-202ENST00000425718 MIOSQ9NXC5 875 aa26.08■■□□□ 1.77
APOE-202ENST00000425718 ZC3H11AO75152 810 aaKnown RBP eCLIP26.07■■□□□ 1.76
APOE-202ENST00000425718 RB1P06400 928 aa26.07■■□□□ 1.76
APOE-202ENST00000425718 GTF2H1P32780 548 aa26.07■■□□□ 1.76
APOE-202ENST00000425718 ZNF445P59923 1031 aa26.07■■□□□ 1.76
APOE-202ENST00000425718 CLDN10P78369 228 aa26.07■■□□□ 1.76
APOE-202ENST00000425718 ZBTB6Q15916 424 aa26.07■■□□□ 1.76
APOE-202ENST00000425718 GLRA4Q5JXX5 417 aa26.07■■□□□ 1.76
APOE-202ENST00000425718 FAM109BQ6ICB4 259 aaPredicted RBP26.07■■□□□ 1.76
APOE-202ENST00000425718 COLGALT2Q8IYK4 626 aa26.07■■□□□ 1.76
APOE-202ENST00000425718 CCDC127Q96BQ5 260 aa26.07■■□□□ 1.76
APOE-202ENST00000425718 ZMAT2Q96NC0 199 aaKnown RBP26.07■■□□□ 1.76
APOE-202ENST00000425718 TGS1Q96RS0 853 aaKnown RBP26.07■■□□□ 1.76
APOE-202ENST00000425718 COLEC11Q9BWP8 271 aa26.07■■□□□ 1.76
APOE-202ENST00000425718 GZF1Q9H116 711 aaPredicted RBP26.07■■□□□ 1.76
APOE-202ENST00000425718 TSPY26PQ9H489 355 aa26.07■■□□□ 1.76
APOE-202ENST00000425718 CWH43Q9H720 699 aa26.07■■□□□ 1.76
APOE-202ENST00000425718 NRDE2Q9H7Z3 1164 aa26.07■■□□□ 1.76
APOE-202ENST00000425718 INTS13Q9NVM9 706 aa26.07■■□□□ 1.76
APOE-202ENST00000425718 NFE2L3Q9Y4A8 694 aa26.07■■□□□ 1.76
APOE-202ENST00000425718 MRPL42Q9Y6G3 142 aaKnown RBP26.07■■□□□ 1.76
APOE-202ENST00000425718 RANBP2P49792 3224 aaKnown RBP26.07■■□□□ 1.76
APOE-202ENST00000425718 TULP1O00294 542 aaPredicted RBP26.06■■□□□ 1.76
APOE-202ENST00000425718 CA3P07451 260 aa26.06■■□□□ 1.76
APOE-202ENST00000425718 DNAJB2P25686 324 aa26.06■■□□□ 1.76
APOE-202ENST00000425718 LRPAP1P30533 357 aa26.06■■□□□ 1.76
APOE-202ENST00000425718 TFAMQ00059 246 aaKnown RBP26.06■■□□□ 1.76
APOE-202ENST00000425718 SPAG1Q07617 926 aa26.06■■□□□ 1.76
APOE-202ENST00000425718 TIFAQ96CG3 184 aa26.06■■□□□ 1.76
APOE-202ENST00000425718 ITGA11Q9UKX5 1188 aa26.06■■□□□ 1.76
APOE-202ENST00000425718 FAN1Q9Y2M0 1017 aa26.06■■□□□ 1.76
APOE-202ENST00000425718 LINC01553A4QN01 128 aa26.05■■□□□ 1.76
APOE-202ENST00000425718 N4BP1O75113 896 aaKnown RBP26.05■■□□□ 1.76
APOE-202ENST00000425718 TPM2P07951 284 aa26.05■■□□□ 1.76
APOE-202ENST00000425718 NFICP08651 508 aa26.05■■□□□ 1.76
APOE-202ENST00000425718 EEF1GP26641 437 aaKnown RBP26.05■■□□□ 1.76
APOE-202ENST00000425718 NAB2Q15742 525 aa26.05■■□□□ 1.76
APOE-202ENST00000425718 PPP2R2DQ66LE6 453 aa26.05■■□□□ 1.76
APOE-202ENST00000425718 BORCS6Q96GS4 357 aa26.05■■□□□ 1.76
APOE-202ENST00000425718 DPP3Q9NY33 737 aa26.05■■□□□ 1.76
APOE-202ENST00000425718 PLAGL2Q9UPG8 496 aa26.05■■□□□ 1.76
APOE-202ENST00000425718 RBAK-RBAKDNI3L0D1 243 aa26.04■■□□□ 1.76
APOE-202ENST00000425718 MEFVO15553 781 aaPredicted RBP26.04■■□□□ 1.76
APOE-202ENST00000425718 PNPLA4P41247 253 aa26.04■■□□□ 1.76
APOE-202ENST00000425718 AFF1P51825 1210 aaKnown RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms