RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 RFX1P22670 979 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 FAM189BP81408 668 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 ZBED6P86452 979 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 BIRC3Q13489 604 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 TRPC3Q13507 836 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 DSC3Q14574 896 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 SGSM1Q2NKQ1 1148 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 ZACNQ401N2 412 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 ZBTB41Q5SVQ8 909 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 C1orf220Q5T0J3 134 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 UBXN11Q5T124 520 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 KLHDC7AQ5VTJ3 777 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 ALKAL1Q6UXT8 129 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 C15orf39Q6ZRI6 1047 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 SLC24A5Q71RS6 500 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 RPUSD2Q8IZ73 545 aaKnown RBP11.16□□□□□ -0.62
MDC1-205ENST00000425072 ZNF516Q92618 1163 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 TAF4BQ92750 862 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 ADAM2Q99965 735 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 EIF2AQ9BY44 585 aaKnown RBP11.16□□□□□ -0.62
MDC1-205ENST00000425072 IMPG2Q9BZV3 1241 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 RGS18Q9NS28 235 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 GIT1Q9Y2X7 761 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 IPPQ9Y573 584 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 CENPFP49454 3210 aa11.16□□□□□ -0.62
MDC1-205ENST00000425072 TIMP1P01033 207 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 CXCL8P10145 99 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 SLC9A1P19634 815 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 CASP14P31944 242 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 KRT9P35527 623 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 TFAMQ00059 246 aaKnown RBP11.15□□□□□ -0.62
MDC1-205ENST00000425072 TMEM132DQ14C87 1099 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 CBWD6Q4V339 395 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 PLEKHG4Q58EX7 1191 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 CBWD3Q5JTY5 395 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 CBWD5Q5RIA9 395 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 TRAF7Q6Q0C0 670 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 ENOSF1Q7L5Y1 443 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 TRAPPC11Q7Z392 1133 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 CEP120Q8N960 986 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 CCDC112Q8NEF3 446 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 PLEKHO2Q8TD55 490 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 DIS3LQ8TF46 1054 aaKnown RBP11.15□□□□□ -0.62
MDC1-205ENST00000425072 FAXDC2Q96IV6 333 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 PANX2Q96RD6 677 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 LSM14BQ9BX40 385 aaKnown RBP11.15□□□□□ -0.62
MDC1-205ENST00000425072 FAM207AQ9NSI2 230 aaPredicted RBP11.15□□□□□ -0.62
MDC1-205ENST00000425072 SLC38A7Q9NVC3 462 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 GCNT4Q9P109 453 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 CEP72Q9P209 647 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 PRKAG2Q9UGJ0 569 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 MYO6Q9UM54 1294 aa11.15□□□□□ -0.62
MDC1-205ENST00000425072 ENPP3O14638 875 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 KIAA0355O15063 1070 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 CXCL10P02778 98 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 KCNE1P15382 129 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 RAG1P15918 1043 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 EN2P19622 333 aaPredicted RBP11.14□□□□□ -0.63
MDC1-205ENST00000425072 CYP3A5P20815 502 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 ATICP31939 592 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 MFAP3P55082 362 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 POLR2FP61218 127 aaKnown RBP11.14□□□□□ -0.63
MDC1-205ENST00000425072 RBP5P82980 135 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 IKBKEQ14164 716 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 EPC2Q52LR7 807 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 XKR4Q5GH76 650 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 TRIM65Q6PJ69 517 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 LRRC8AQ8IWT6 810 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 TMEM192Q8IY95 271 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 TMEM199Q8N511 208 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 SMG8Q8ND04 991 aaKnown RBP11.14□□□□□ -0.63
MDC1-205ENST00000425072 DBF4BQ8NFT6 615 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 BEST2Q8NFU1 509 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 LMO3Q8TAP4 145 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 RSPH1Q8WYR4 309 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 SYN2Q92777 582 aaPredicted RBP11.14□□□□□ -0.63
MDC1-205ENST00000425072 JAKMIP2Q96AA8 810 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 KIF12Q96FN5 646 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 NT5C1BQ96P26 610 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 SPAG5Q96R06 1193 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 NAA15Q9BXJ9 866 aaKnown RBP11.14□□□□□ -0.63
MDC1-205ENST00000425072 STK33Q9BYT3 514 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 INTS2Q9H0H0 1204 aaKnown RBP11.14□□□□□ -0.63
MDC1-205ENST00000425072 TSPYL2Q9H2G4 693 aaPredicted RBP11.14□□□□□ -0.63
MDC1-205ENST00000425072 TMX1Q9H3N1 280 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 ELAC1Q9H777 363 aaKnown RBP11.14□□□□□ -0.63
MDC1-205ENST00000425072 DPP3Q9NY33 737 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 KANSL3Q9P2N6 904 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 APEX2Q9UBZ4 518 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 TBX21Q9UL17 535 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 UBQLN1Q9UMX0 589 aaKnown RBP11.14□□□□□ -0.63
MDC1-205ENST00000425072 HTTP42858 3142 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 TRIP11Q15643 1979 aa11.14□□□□□ -0.63
MDC1-205ENST00000425072 SMIM28A0A1B0GU29 152 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 NBNO60934 754 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 EFCAB14O75071 495 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 RECQL4O94761 1208 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 HLA-DRAP01903 254 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 GYPCP04921 128 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 THP07101 528 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms