RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 SEL1L2Q5TEA6 688 aa15.33■□□□□ 0.04
MSH5-206ENST00000423982 TAOK1Q7L7X3 1001 aa15.33■□□□□ 0.04
MSH5-206ENST00000423982 SLC13A5Q86YT5 568 aaPredicted RBP15.33■□□□□ 0.04
MSH5-206ENST00000423982 SLC17A8Q8NDX2 589 aa15.33■□□□□ 0.04
MSH5-206ENST00000423982 NAP1L4Q99733 375 aaKnown RBP15.33■□□□□ 0.04
MSH5-206ENST00000423982 FAM118BQ9BPY3 351 aa15.33■□□□□ 0.04
MSH5-206ENST00000423982 KIAA1683Q9H0B3 1180 aa15.33■□□□□ 0.04
MSH5-206ENST00000423982 EXOC3O60645 756 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 ALADP13716 330 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 ZNF76P36508 570 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 GCLMP48507 274 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 C1orf186Q6ZWK4 172 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 RHOT2Q8IXI1 618 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 FAM167BQ9BTA0 163 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.32■□□□□ 0.04
MSH5-206ENST00000423982 FRMD4BQ9Y2L6 1034 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 SPOPO43791 374 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 SLITRK3O94933 977 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 PPP3CAQ08209 521 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 SLMAPQ14BN4 828 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 Q4G0T1 1027 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 BTNL9Q6UXG8 535 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 FAM47EQ6ZV65 393 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 SPATA21Q7Z572 469 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 PHLDB2Q86SQ0 1253 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 FBXO11Q86XK2 927 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 FAM178BQ8IXR5 827 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 MAB21L3Q8N8X9 362 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 SPDL1Q96EA4 605 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 HERPUD2Q9BSE4 406 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 TMEM109Q9BVC6 243 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 AS3MTQ9HBK9 375 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 HOMER3Q9NSC5 361 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 NOP53Q9NZM5 478 aaKnown RBP15.32■□□□□ 0.04
MSH5-206ENST00000423982 ADAM22Q9P0K1 906 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 MYH11P35749 1972 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 EMSYQ7Z589 1322 aa15.32■□□□□ 0.04
MSH5-206ENST00000423982 SUN1O94901 812 aa15.31■□□□□ 0.04
MSH5-206ENST00000423982 MSH2P43246 934 aa15.31■□□□□ 0.04
MSH5-206ENST00000423982 GPC5P78333 572 aa15.31■□□□□ 0.04
MSH5-206ENST00000423982 KRT17Q04695 432 aa15.31■□□□□ 0.04
MSH5-206ENST00000423982 BFSP1Q12934 665 aa15.31■□□□□ 0.04
MSH5-206ENST00000423982 DAB2IPQ5VWQ8 1189 aa15.31■□□□□ 0.04
MSH5-206ENST00000423982 C11orf63Q6NUN7 778 aa15.31■□□□□ 0.04
MSH5-206ENST00000423982 RNF207Q6ZRF8 634 aa15.31■□□□□ 0.04
MSH5-206ENST00000423982 ZNF720Q7Z2F6 126 aa15.31■□□□□ 0.04
MSH5-206ENST00000423982 NOP9Q86U38 636 aaKnown RBP15.31■□□□□ 0.04
MSH5-206ENST00000423982 AGBL1Q96MI9 1066 aa15.31■□□□□ 0.04
MSH5-206ENST00000423982 PARVGQ9HBI0 331 aa15.31■□□□□ 0.04
MSH5-206ENST00000423982 CEP350Q5VT06 3117 aa15.31■□□□□ 0.04
MSH5-206ENST00000423982 MIF4GDA9UHW6 222 aaKnown RBP15.31■□□□□ 0.04
MSH5-206ENST00000423982 BRAFP15056 766 aa15.31■□□□□ 0.04
MSH5-206ENST00000423982 PEX19P40855 299 aa15.31■□□□□ 0.04
MSH5-206ENST00000423982 ZNF568Q3ZCX4 644 aa15.31■□□□□ 0.04
MSH5-206ENST00000423982 ODR4Q5SWX8 454 aa15.31■□□□□ 0.04
MSH5-206ENST00000423982 MFSD5Q6N075 450 aa15.31■□□□□ 0.04
MSH5-206ENST00000423982 GADL1Q6ZQY3 521 aa15.31■□□□□ 0.04
MSH5-206ENST00000423982 HS2ST1Q7LGA3 356 aa15.31■□□□□ 0.04
MSH5-206ENST00000423982 CD101Q93033 1021 aa15.31■□□□□ 0.04
MSH5-206ENST00000423982 TGS1Q96RS0 853 aaKnown RBP15.31■□□□□ 0.04
MSH5-206ENST00000423982 CHST7Q9NS84 486 aa15.31■□□□□ 0.04
MSH5-206ENST00000423982 CELF2O95319 508 aaKnown RBP15.3■□□□□ 0.04
MSH5-206ENST00000423982 CALCOCO2Q13137 446 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 TREML2Q5T2D2 321 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 SLC47A2Q86VL8 602 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 CHURC1Q8WUH1 139 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 HSD17B14Q9BPX1 270 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 WDR18Q9BV38 432 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 NUP85Q9BW27 656 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 AMNQ9BXJ7 453 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 RAVER2Q9HCJ3 691 aaKnown RBP15.3■□□□□ 0.04
MSH5-206ENST00000423982 ARHGEF3Q9NR81 526 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 PARP2Q9UGN5 583 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 ASIC3Q9UHC3 531 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.3■□□□□ 0.04
MSH5-206ENST00000423982 AFG3L2Q9Y4W6 797 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 DOCK1Q14185 1865 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 PASKQ96RG2 1323 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 SCN4AP35499 1836 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 ECEL1O95672 775 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 SREBF1P36956 1147 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 SLC8A3P57103 927 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 SRRM1Q8IYB3 904 aaKnown RBP15.3■□□□□ 0.04
MSH5-206ENST00000423982 ANKRD13AQ8IZ07 590 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 SYCP3Q8IZU3 236 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 SPOCK2Q92563 424 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 UTP4Q969X6 686 aaKnown RBP15.3■□□□□ 0.04
MSH5-206ENST00000423982 OPTNQ96CV9 577 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 ATG4CQ96DT6 458 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 SH2D3AQ9BRG2 576 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 TRIM7Q9C029 511 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 DMAC2Q9NW81 257 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 SLC5A4Q9NY91 659 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 NKX1-2Q9UD57 310 aaPredicted RBP15.3■□□□□ 0.04
MSH5-206ENST00000423982 WDR46O15213 610 aaKnown RBP15.3■□□□□ 0.04
MSH5-206ENST00000423982 EIF3DO15371 548 aaKnown RBP eCLIP15.3■□□□□ 0.04
MSH5-206ENST00000423982 CYP26A1O43174 497 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 AP3B2Q13367 1082 aa15.3■□□□□ 0.04
MSH5-206ENST00000423982 TRMT1LQ7Z2T5 733 aaKnown RBP15.3■□□□□ 0.04
MSH5-206ENST00000423982 ECHDC2Q86YB7 292 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms