RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 C18orf25Q96B23 403 aaPredicted RBP17.13■□□□□ 0.33
BRAT1-202ENST00000421712 TCF25Q9BQ70 676 aa17.13■□□□□ 0.33
BRAT1-202ENST00000421712 PAAF1Q9BRP4 392 aa17.13■□□□□ 0.33
BRAT1-202ENST00000421712 GOLGA2P5Q9HBQ8 144 aa17.13■□□□□ 0.33
BRAT1-202ENST00000421712 AGPAT3Q9NRZ7 376 aa17.13■□□□□ 0.33
BRAT1-202ENST00000421712 HSPBP1Q9NZL4 362 aa17.13■□□□□ 0.33
BRAT1-202ENST00000421712 PLXNA4Q9HCM2 1894 aa17.12■□□□□ 0.33
BRAT1-202ENST00000421712 MEFVO15553 781 aaPredicted RBP17.12■□□□□ 0.33
BRAT1-202ENST00000421712 TGFB1I1O43294 461 aa17.12■□□□□ 0.33
BRAT1-202ENST00000421712 XPOTO43592 962 aaKnown RBP17.12■□□□□ 0.33
BRAT1-202ENST00000421712 IRS1P35568 1242 aa17.12■□□□□ 0.33
BRAT1-202ENST00000421712 ERVFC1P60507 584 aa17.12■□□□□ 0.33
BRAT1-202ENST00000421712 CAMK4Q16566 473 aa17.12■□□□□ 0.33
BRAT1-202ENST00000421712 ISM2Q6H9L7 571 aa17.12■□□□□ 0.33
BRAT1-202ENST00000421712 PDE12Q6L8Q7 609 aaKnown RBP17.12■□□□□ 0.33
BRAT1-202ENST00000421712 RDH13Q8NBN7 331 aa17.12■□□□□ 0.33
BRAT1-202ENST00000421712 ZSWIM2Q8NEG5 633 aa17.12■□□□□ 0.33
BRAT1-202ENST00000421712 GOLGA5Q8TBA6 731 aa17.12■□□□□ 0.33
BRAT1-202ENST00000421712 BCL7CQ8WUZ0 217 aaPredicted RBP17.12■□□□□ 0.33
BRAT1-202ENST00000421712 PPP2R3CQ969Q6 453 aa17.12■□□□□ 0.33
BRAT1-202ENST00000421712 DDX27Q96GQ7 796 aaKnown RBP17.12■□□□□ 0.33
BRAT1-202ENST00000421712 UROC1Q96N76 676 aa17.12■□□□□ 0.33
BRAT1-202ENST00000421712 NSUN3Q9H649 340 aaKnown RBP17.12■□□□□ 0.33
BRAT1-202ENST00000421712 LMBRD1Q9NUN5 540 aa17.12■□□□□ 0.33
BRAT1-202ENST00000421712 RBAKQ9NYW8 714 aaPredicted RBP17.12■□□□□ 0.33
BRAT1-202ENST00000421712 CGNQ9P2M7 1197 aaKnown RBP17.12■□□□□ 0.33
BRAT1-202ENST00000421712 MYO7AQ13402 2215 aa17.11■□□□□ 0.33
BRAT1-202ENST00000421712 ZNF233A6NK53 670 aa17.11■□□□□ 0.33
BRAT1-202ENST00000421712 F8W810 466 aa17.11■□□□□ 0.33
BRAT1-202ENST00000421712 B3GAT3O94766 335 aa17.11■□□□□ 0.33
BRAT1-202ENST00000421712 IL18RAPO95256 599 aa17.11■□□□□ 0.33
BRAT1-202ENST00000421712 CXCL14O95715 111 aa17.11■□□□□ 0.33
BRAT1-202ENST00000421712 CLCNKBP51801 687 aa17.11■□□□□ 0.33
BRAT1-202ENST00000421712 CAMK1Q14012 370 aa17.11■□□□□ 0.33
BRAT1-202ENST00000421712 TMEM132DQ14C87 1099 aa17.11■□□□□ 0.33
BRAT1-202ENST00000421712 NAB2Q15742 525 aa17.11■□□□□ 0.33
BRAT1-202ENST00000421712 TCEAL5Q5H9L2 206 aa17.11■□□□□ 0.33
BRAT1-202ENST00000421712 ZNF658Q5TYW1 1059 aaPredicted RBP17.11■□□□□ 0.33
BRAT1-202ENST00000421712 JADE1Q6IE81 842 aa17.11■□□□□ 0.33
BRAT1-202ENST00000421712 KIAA1841Q6NSI8 718 aa17.11■□□□□ 0.33
BRAT1-202ENST00000421712 DCLRE1AQ6PJP8 1040 aa17.11■□□□□ 0.33
BRAT1-202ENST00000421712 CRELD2Q6UXH1 353 aaPredicted RBP17.11■□□□□ 0.33
BRAT1-202ENST00000421712 EP400NLQ6ZTU2 488 aa17.11■□□□□ 0.33
BRAT1-202ENST00000421712 SMYD4Q8IYR2 804 aaPredicted RBP17.11■□□□□ 0.33
BRAT1-202ENST00000421712 IGFLR1Q9H665 355 aa17.11■□□□□ 0.33
BRAT1-202ENST00000421712 KIAA1586Q9HCI6 787 aa17.11■□□□□ 0.33
BRAT1-202ENST00000421712 NGRNQ9NPE2 291 aaKnown RBP17.11■□□□□ 0.33
BRAT1-202ENST00000421712 MARCH5Q9NX47 278 aa17.11■□□□□ 0.33
BRAT1-202ENST00000421712 STK39Q9UEW8 545 aa17.11■□□□□ 0.33
BRAT1-202ENST00000421712 ADAM28Q9UKQ2 775 aa17.11■□□□□ 0.33
BRAT1-202ENST00000421712 UBQLN1Q9UMX0 589 aaKnown RBP17.11■□□□□ 0.33
BRAT1-202ENST00000421712 PCDHGC5Q9Y5F6 944 aa17.11■□□□□ 0.33
BRAT1-202ENST00000421712 PODXLO00592 558 aa17.1■□□□□ 0.33
BRAT1-202ENST00000421712 CALUO43852 315 aaPredicted RBP17.1■□□□□ 0.33
BRAT1-202ENST00000421712 EXOC3O60645 756 aa17.1■□□□□ 0.33
BRAT1-202ENST00000421712 RPL9P32969 192 aaKnown RBP17.1■□□□□ 0.33
BRAT1-202ENST00000421712 POU5F1Q01860 360 aaKnown RBP17.1■□□□□ 0.33
BRAT1-202ENST00000421712 SOX4Q06945 474 aaPredicted RBP17.1■□□□□ 0.33
BRAT1-202ENST00000421712 SMC1AQ14683 1233 aaKnown RBP17.1■□□□□ 0.33
BRAT1-202ENST00000421712 RBM23Q86U06 439 aaKnown RBP17.1■□□□□ 0.33
BRAT1-202ENST00000421712 XXYLT1Q8NBI6 393 aa17.1■□□□□ 0.33
BRAT1-202ENST00000421712 BEST2Q8NFU1 509 aa17.1■□□□□ 0.33
BRAT1-202ENST00000421712 TSPAN18Q96SJ8 248 aa17.1■□□□□ 0.33
BRAT1-202ENST00000421712 GTPBP4Q9BZE4 634 aaKnown RBP17.1■□□□□ 0.33
BRAT1-202ENST00000421712 ASB7Q9H672 318 aa17.1■□□□□ 0.33
BRAT1-202ENST00000421712 TLE6Q9H808 572 aa17.1■□□□□ 0.33
BRAT1-202ENST00000421712 TUBGCP4Q9UGJ1 667 aa17.1■□□□□ 0.33
BRAT1-202ENST00000421712 MAN1B1Q9UKM7 699 aa17.1■□□□□ 0.33
BRAT1-202ENST00000421712 BIN1O00499 593 aa17.09■□□□□ 0.33
BRAT1-202ENST00000421712 PDXKO00764 312 aa17.09■□□□□ 0.33
BRAT1-202ENST00000421712 C2CD2LO14523 706 aa17.09■□□□□ 0.33
BRAT1-202ENST00000421712 KIF4AO95239 1232 aa17.09■□□□□ 0.33
BRAT1-202ENST00000421712 NFICP08651 508 aa17.09■□□□□ 0.33
BRAT1-202ENST00000421712 TFAMQ00059 246 aaKnown RBP17.09■□□□□ 0.33
BRAT1-202ENST00000421712 STIM1Q13586 685 aa17.09■□□□□ 0.33
BRAT1-202ENST00000421712 UPP1Q16831 310 aa17.09■□□□□ 0.33
BRAT1-202ENST00000421712 FUT10Q6P4F1 479 aa17.09■□□□□ 0.33
BRAT1-202ENST00000421712 CEP57Q86XR8 500 aa17.09■□□□□ 0.33
BRAT1-202ENST00000421712 CBWD2Q8IUF1 395 aa17.09■□□□□ 0.33
BRAT1-202ENST00000421712 BRSK2Q8IWQ3 736 aa17.09■□□□□ 0.33
BRAT1-202ENST00000421712 GUF1Q8N442 669 aaKnown RBP17.09■□□□□ 0.33
BRAT1-202ENST00000421712 AUTS2Q8WXX7 1259 aa17.09■□□□□ 0.33
BRAT1-202ENST00000421712 KCTD10Q9H3F6 313 aa17.09■□□□□ 0.33
BRAT1-202ENST00000421712 DERAQ9Y315 318 aa17.09■□□□□ 0.33
BRAT1-202ENST00000421712 NUB1Q9Y5A7 615 aa17.09■□□□□ 0.33
BRAT1-202ENST00000421712 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.09■□□□□ 0.33
BRAT1-202ENST00000421712 SF3B1O75533 1304 aaKnown RBP eCLIP17.08■□□□□ 0.32
BRAT1-202ENST00000421712 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.08■□□□□ 0.32
BRAT1-202ENST00000421712 FSCN2O14926 492 aa17.08■□□□□ 0.32
BRAT1-202ENST00000421712 PER2O15055 1255 aa17.08■□□□□ 0.32
BRAT1-202ENST00000421712 SOD2P04179 222 aa17.08■□□□□ 0.32
BRAT1-202ENST00000421712 URODP06132 367 aa17.08■□□□□ 0.32
BRAT1-202ENST00000421712 ADRB2P07550 413 aa17.08■□□□□ 0.32
BRAT1-202ENST00000421712 CTSAP10619 480 aa17.08■□□□□ 0.32
BRAT1-202ENST00000421712 PRCPP42785 496 aa17.08■□□□□ 0.32
BRAT1-202ENST00000421712 GUCY2FP51841 1108 aa17.08■□□□□ 0.32
BRAT1-202ENST00000421712 SNRNP35Q16560 246 aaKnown RBP17.08■□□□□ 0.32
BRAT1-202ENST00000421712 CEP135Q66GS9 1140 aa17.08■□□□□ 0.32
BRAT1-202ENST00000421712 TAS1R1Q7RTX1 841 aa17.08■□□□□ 0.32
BRAT1-202ENST00000421712 ADGRD2Q7Z7M1 963 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms