RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 CCDC94Q9BW85 323 aaPredicted RBP11.49□□□□□ -0.57
RFC1-203ENST00000418436 GBP3Q9H0R5 595 aa11.49□□□□□ -0.57
RFC1-203ENST00000418436 BLZF1Q9H2G9 400 aa11.49□□□□□ -0.57
RFC1-203ENST00000418436 ANKFY1Q9P2R3 1169 aa11.49□□□□□ -0.57
RFC1-203ENST00000418436 A0A0B4J269 797 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 NRP1O14786 923 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 FSCN2O14926 492 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 KLRC4O43908 158 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 ZNF202O95125 648 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 GCNT3O95395 438 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 EFEMP2O95967 443 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 THP07101 528 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 MYBP10242 640 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 IRS1P35568 1242 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 ERVFC1P60507 584 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 KRT17Q04695 432 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 SNW1Q13573 536 aaKnown RBP11.48□□□□□ -0.57
RFC1-203ENST00000418436 CCDC85BQ15834 202 aaPredicted RBP11.48□□□□□ -0.57
RFC1-203ENST00000418436 KYAT1Q16773 422 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 SLC10A6Q3KNW5 377 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 TIGD5Q53EQ6 642 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 PDE12Q6L8Q7 609 aaKnown RBP11.48□□□□□ -0.57
RFC1-203ENST00000418436 KRBA2Q6ZNG9 492 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 EPM2AIP1Q7L775 607 aaPredicted RBP11.48□□□□□ -0.57
RFC1-203ENST00000418436 FMR1NBQ8N0W7 255 aaPredicted RBP11.48□□□□□ -0.57
RFC1-203ENST00000418436 GLIS3Q8NEA6 775 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 ENGASEQ8NFI3 743 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 BCL7CQ8WUZ0 217 aaPredicted RBP11.48□□□□□ -0.57
RFC1-203ENST00000418436 HPS3Q969F9 1004 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 ACAP3Q96P50 834 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 PPP1R10Q96QC0 940 aaKnown RBP11.48□□□□□ -0.57
RFC1-203ENST00000418436 ACCSQ96QU6 501 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 RPS6KC1Q96S38 1066 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 NSUN3Q9H649 340 aaKnown RBP11.48□□□□□ -0.57
RFC1-203ENST00000418436 TOPORSQ9NS56 1045 aaPredicted RBP11.48□□□□□ -0.57
RFC1-203ENST00000418436 PUF60Q9UHX1 559 aaKnown RBP11.48□□□□□ -0.57
RFC1-203ENST00000418436 EXOC7Q9UPT5 735 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 FAN1Q9Y2M0 1017 aa11.48□□□□□ -0.57
RFC1-203ENST00000418436 MYO7AQ13402 2215 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 SMIM28A0A1B0GU29 152 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 TISP43B9A030 160 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 OGTO15294 1046 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 EIF3DO15371 548 aaKnown RBP eCLIP11.47□□□□□ -0.57
RFC1-203ENST00000418436 PRPF6O94906 941 aaKnown RBP11.47□□□□□ -0.57
RFC1-203ENST00000418436 ADRB2P07550 413 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 CFHP08603 1231 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 CLTAP09496 248 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 HARSP12081 509 aaKnown RBP11.47□□□□□ -0.57
RFC1-203ENST00000418436 KCNE1P15382 129 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 ADSSP30520 456 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 HOXD13P35453 343 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 YARSP54577 528 aaKnown RBP11.47□□□□□ -0.57
RFC1-203ENST00000418436 OSTNP61366 133 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 TUSC3Q13454 348 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 COL19A1Q14993 1142 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 KMT5BQ4FZB7 885 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 SEZ6Q53EL9 994 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 FAM26FQ5R3K3 315 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 SLFN12LQ6IEE8 588 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 STXBP4Q6ZWJ1 553 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 DDX53Q86TM3 631 aaKnown RBP11.47□□□□□ -0.57
RFC1-203ENST00000418436 MICALL1Q8N3F8 863 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 TMEM87AQ8NBN3 555 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 ZNF507Q8TCN5 953 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 PPM1EQ8WY54 764 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 ZNF516Q92618 1163 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 TMEM169Q96HH4 297 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 SNX27Q96L92 541 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 ZMAT2Q96NC0 199 aaKnown RBP11.47□□□□□ -0.57
RFC1-203ENST00000418436 VN1R3Q9BXE9 311 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 IKZF4Q9H2S9 585 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 TMEM206Q9H813 350 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 PLEKHA5Q9HAU0 1116 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 TLR9Q9NR96 1032 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 MARCH5Q9NX47 278 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 CNTN3Q9P232 1028 aa11.47□□□□□ -0.57
RFC1-203ENST00000418436 UBE4BO95155 1302 aa11.46□□□□□ -0.57
RFC1-203ENST00000418436 TTC26A0AVF1 554 aa11.46□□□□□ -0.57
RFC1-203ENST00000418436 GOLGA6L4A6NEF3 574 aa11.46□□□□□ -0.57
RFC1-203ENST00000418436 NR1I2O75469 434 aa11.46□□□□□ -0.57
RFC1-203ENST00000418436 TNFSF9P41273 254 aa11.46□□□□□ -0.57
RFC1-203ENST00000418436 MATR3P43243 847 aaKnown RBP eCLIP11.46□□□□□ -0.57
RFC1-203ENST00000418436 OR1G1P47890 313 aa11.46□□□□□ -0.57
RFC1-203ENST00000418436 COPS2P61201 443 aa11.46□□□□□ -0.57
RFC1-203ENST00000418436 POU5F1Q01860 360 aaKnown RBP11.46□□□□□ -0.57
RFC1-203ENST00000418436 DPYDQ12882 1025 aa11.46□□□□□ -0.57
RFC1-203ENST00000418436 PSMD2Q13200 908 aa11.46□□□□□ -0.57
RFC1-203ENST00000418436 POSTNQ15063 836 aa11.46□□□□□ -0.57
RFC1-203ENST00000418436 BMT2Q1RMZ1 405 aa11.46□□□□□ -0.57
RFC1-203ENST00000418436 TPRNQ4KMQ1 711 aa11.46□□□□□ -0.57
RFC1-203ENST00000418436 TCEAL5Q5H9L2 206 aa11.46□□□□□ -0.57
RFC1-203ENST00000418436 ZBTB41Q5SVQ8 909 aa11.46□□□□□ -0.57
RFC1-203ENST00000418436 KANK3Q6NY19 840 aa11.46□□□□□ -0.57
RFC1-203ENST00000418436 RNF168Q8IYW5 571 aaPredicted RBP11.46□□□□□ -0.57
RFC1-203ENST00000418436 PAAF1Q9BRP4 392 aa11.46□□□□□ -0.57
RFC1-203ENST00000418436 MSTO1Q9BUK6 570 aa11.46□□□□□ -0.57
RFC1-203ENST00000418436 COLEC11Q9BWP8 271 aa11.46□□□□□ -0.57
RFC1-203ENST00000418436 ZBP1Q9H171 429 aa11.46□□□□□ -0.57
RFC1-203ENST00000418436 NGRNQ9NPE2 291 aaKnown RBP11.46□□□□□ -0.57
RFC1-203ENST00000418436 STK39Q9UEW8 545 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms