RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 DERAQ9Y315 318 aa25.1■■□□□ 1.61
SMARCB1-205ENST00000417137 MYO9BQ13459 2157 aa25.1■■□□□ 1.61
SMARCB1-205ENST00000417137 PDXKO00764 312 aa25.09■■□□□ 1.61
SMARCB1-205ENST00000417137 MEFVO15553 781 aaPredicted RBP25.09■■□□□ 1.61
SMARCB1-205ENST00000417137 RPL9P32969 192 aaKnown RBP25.09■■□□□ 1.61
SMARCB1-205ENST00000417137 CAMK1Q14012 370 aa25.09■■□□□ 1.61
SMARCB1-205ENST00000417137 ZNF658Q5TYW1 1059 aaPredicted RBP25.09■■□□□ 1.61
SMARCB1-205ENST00000417137 DCLRE1AQ6PJP8 1040 aa25.09■■□□□ 1.61
SMARCB1-205ENST00000417137 CRELD2Q6UXH1 353 aaPredicted RBP25.09■■□□□ 1.61
SMARCB1-205ENST00000417137 TMC7Q7Z402 723 aa25.09■■□□□ 1.61
SMARCB1-205ENST00000417137 TMEM173Q86WV6 379 aaPredicted RBP25.09■■□□□ 1.61
SMARCB1-205ENST00000417137 C12orf56Q8IXR9 622 aa25.09■■□□□ 1.61
SMARCB1-205ENST00000417137 GUF1Q8N442 669 aaKnown RBP25.09■■□□□ 1.61
SMARCB1-205ENST00000417137 NSUN3Q9H649 340 aaKnown RBP25.09■■□□□ 1.61
SMARCB1-205ENST00000417137 UBQLN1Q9UMX0 589 aaKnown RBP25.09■■□□□ 1.61
SMARCB1-205ENST00000417137 GOLGA8IPA6NC78 632 aa25.08■■□□□ 1.61
SMARCB1-205ENST00000417137 ZNF233A6NK53 670 aa25.08■■□□□ 1.61
SMARCB1-205ENST00000417137 GOLGA8JA6NMD2 632 aa25.08■■□□□ 1.61
SMARCB1-205ENST00000417137 CLIC2O15247 247 aa25.08■■□□□ 1.61
SMARCB1-205ENST00000417137 CYP3A5P20815 502 aa25.08■■□□□ 1.61
SMARCB1-205ENST00000417137 CCDC85BQ15834 202 aaPredicted RBP25.08■■□□□ 1.61
SMARCB1-205ENST00000417137 VPS52Q8N1B4 723 aa25.08■■□□□ 1.61
SMARCB1-205ENST00000417137 XXYLT1Q8NBI6 393 aa25.08■■□□□ 1.61
SMARCB1-205ENST00000417137 ERCC4Q92889 916 aaPredicted RBP25.08■■□□□ 1.61
SMARCB1-205ENST00000417137 TCF25Q9BQ70 676 aa25.08■■□□□ 1.61
SMARCB1-205ENST00000417137 ENTPD7Q9NQZ7 604 aa25.08■■□□□ 1.61
SMARCB1-205ENST00000417137 RBAKQ9NYW8 714 aaPredicted RBP25.08■■□□□ 1.61
SMARCB1-205ENST00000417137 ADAM28Q9UKQ2 775 aa25.08■■□□□ 1.61
SMARCB1-205ENST00000417137 CALUO43852 315 aaPredicted RBP25.07■■□□□ 1.6
SMARCB1-205ENST00000417137 ERVFC1P60507 584 aa25.07■■□□□ 1.6
SMARCB1-205ENST00000417137 NT5DC4Q86YG4 428 aa25.07■■□□□ 1.6
SMARCB1-205ENST00000417137 BRSK2Q8IWQ3 736 aa25.07■■□□□ 1.6
SMARCB1-205ENST00000417137 BEST2Q8NFU1 509 aa25.07■■□□□ 1.6
SMARCB1-205ENST00000417137 BCL7CQ8WUZ0 217 aaPredicted RBP25.07■■□□□ 1.6
SMARCB1-205ENST00000417137 PPM1EQ8WY54 764 aa25.07■■□□□ 1.6
SMARCB1-205ENST00000417137 KCTD10Q9H3F6 313 aa25.07■■□□□ 1.6
SMARCB1-205ENST00000417137 MARCH5Q9NX47 278 aa25.07■■□□□ 1.6
SMARCB1-205ENST00000417137 MAPK8IP1Q9UQF2 711 aa25.07■■□□□ 1.6
SMARCB1-205ENST00000417137 C2CD2Q9Y426 696 aa25.07■■□□□ 1.6
SMARCB1-205ENST00000417137 TULP1O00294 542 aaPredicted RBP25.06■■□□□ 1.6
SMARCB1-205ENST00000417137 FSCN2O14926 492 aa25.06■■□□□ 1.6
SMARCB1-205ENST00000417137 B3GAT3O94766 335 aa25.06■■□□□ 1.6
SMARCB1-205ENST00000417137 CSPG5O95196 566 aa25.06■■□□□ 1.6
SMARCB1-205ENST00000417137 CYP2J2P51589 502 aa25.06■■□□□ 1.6
SMARCB1-205ENST00000417137 CLCNKBP51801 687 aa25.06■■□□□ 1.6
SMARCB1-205ENST00000417137 SPAG1Q07617 926 aa25.06■■□□□ 1.6
SMARCB1-205ENST00000417137 ELAVL2Q12926 359 aaKnown RBP25.06■■□□□ 1.6
SMARCB1-205ENST00000417137 SMC1AQ14683 1233 aaKnown RBP25.06■■□□□ 1.6
SMARCB1-205ENST00000417137 TMEM132DQ14C87 1099 aa25.06■■□□□ 1.6
SMARCB1-205ENST00000417137 SURF1Q15526 300 aa25.06■■□□□ 1.6
SMARCB1-205ENST00000417137 ZBTB6Q15916 424 aa25.06■■□□□ 1.6
SMARCB1-205ENST00000417137 UPP1Q16831 310 aa25.06■■□□□ 1.6
SMARCB1-205ENST00000417137 JADE1Q6IE81 842 aa25.06■■□□□ 1.6
SMARCB1-205ENST00000417137 RABGGTAQ92696 567 aa25.06■■□□□ 1.6
SMARCB1-205ENST00000417137 C18orf25Q96B23 403 aaPredicted RBP25.06■■□□□ 1.6
SMARCB1-205ENST00000417137 PAAF1Q9BRP4 392 aa25.06■■□□□ 1.6
SMARCB1-205ENST00000417137 SSX2IPQ9Y2D8 614 aa25.06■■□□□ 1.6
SMARCB1-205ENST00000417137 KIAA1671Q9BY89 1806 aa25.06■■□□□ 1.6
SMARCB1-205ENST00000417137 TMEM189-UBE2V1I3L0A0 370 aa25.05■■□□□ 1.6
SMARCB1-205ENST00000417137 TRAPPC3O43617 180 aa25.05■■□□□ 1.6
SMARCB1-205ENST00000417137 NCK2O43639 380 aa25.05■■□□□ 1.6
SMARCB1-205ENST00000417137 CXCL14O95715 111 aa25.05■■□□□ 1.6
SMARCB1-205ENST00000417137 SOD2P04179 222 aa25.05■■□□□ 1.6
SMARCB1-205ENST00000417137 IRS1P35568 1242 aa25.05■■□□□ 1.6
SMARCB1-205ENST00000417137 SOX4Q06945 474 aaPredicted RBP25.05■■□□□ 1.6
SMARCB1-205ENST00000417137 STIM1Q13586 685 aa25.05■■□□□ 1.6
SMARCB1-205ENST00000417137 MYBPC2Q14324 1141 aa25.05■■□□□ 1.6
SMARCB1-205ENST00000417137 CAMK4Q16566 473 aa25.05■■□□□ 1.6
SMARCB1-205ENST00000417137 COBLL1Q53SF7 1204 aa25.05■■□□□ 1.6
SMARCB1-205ENST00000417137 FUT10Q6P4F1 479 aa25.05■■□□□ 1.6
SMARCB1-205ENST00000417137 CACTINQ8WUQ7 758 aaKnown RBP25.05■■□□□ 1.6
SMARCB1-205ENST00000417137 TMEM174Q8WUU8 243 aa25.05■■□□□ 1.6
SMARCB1-205ENST00000417137 FBXL18Q96ME1 805 aa25.05■■□□□ 1.6
SMARCB1-205ENST00000417137 GOLGA2P5Q9HBQ8 144 aa25.05■■□□□ 1.6
SMARCB1-205ENST00000417137 CACNG4Q9UBN1 327 aa25.05■■□□□ 1.6
SMARCB1-205ENST00000417137 TRAF3IP3Q9Y228 551 aa25.05■■□□□ 1.6
SMARCB1-205ENST00000417137 SF3B1O75533 1304 aaKnown RBP eCLIP25.05■■□□□ 1.6
SMARCB1-205ENST00000417137 PODXLO00592 558 aa25.04■■□□□ 1.6
SMARCB1-205ENST00000417137 EXOC3O60645 756 aa25.04■■□□□ 1.6
SMARCB1-205ENST00000417137 CTSAP10619 480 aa25.04■■□□□ 1.6
SMARCB1-205ENST00000417137 PPP1R2P41236 205 aa25.04■■□□□ 1.6
SMARCB1-205ENST00000417137 SKIV2LQ15477 1246 aaKnown RBP25.04■■□□□ 1.6
SMARCB1-205ENST00000417137 TCEAL5Q5H9L2 206 aa25.04■■□□□ 1.6
SMARCB1-205ENST00000417137 SPATA1Q5VX52 437 aa25.04■■□□□ 1.6
SMARCB1-205ENST00000417137 PLPP4Q5VZY2 271 aa25.04■■□□□ 1.6
SMARCB1-205ENST00000417137 KIAA1841Q6NSI8 718 aa25.04■■□□□ 1.6
SMARCB1-205ENST00000417137 SLC9A9Q8IVB4 645 aa25.04■■□□□ 1.6
SMARCB1-205ENST00000417137 MRPL43Q8N983 215 aaKnown RBP25.04■■□□□ 1.6
SMARCB1-205ENST00000417137 ZSWIM2Q8NEG5 633 aa25.04■■□□□ 1.6
SMARCB1-205ENST00000417137 ZBP1Q9H171 429 aa25.04■■□□□ 1.6
SMARCB1-205ENST00000417137 MAN1B1Q9UKM7 699 aa25.04■■□□□ 1.6
SMARCB1-205ENST00000417137 TDRD15B5MCY1 1934 aaKnown RBP25.04■■□□□ 1.6
SMARCB1-205ENST00000417137 CHD7Q9P2D1 2997 aa25.03■■□□□ 1.6
SMARCB1-205ENST00000417137 KIF4AO95239 1232 aa25.03■■□□□ 1.6
SMARCB1-205ENST00000417137 RPL13P26373 211 aaKnown RBP25.03■■□□□ 1.6
SMARCB1-205ENST00000417137 LRPAP1P30533 357 aa25.03■■□□□ 1.6
SMARCB1-205ENST00000417137 CA8P35219 290 aa25.03■■□□□ 1.6
SMARCB1-205ENST00000417137 SNRNP35Q16560 246 aaKnown RBP25.03■■□□□ 1.6
SMARCB1-205ENST00000417137 USP41Q3LFD5 358 aa25.03■■□□□ 1.6
SMARCB1-205ENST00000417137 CBWD2Q8IUF1 395 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms