RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 FBXL5Q9UKA1 691 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 CCDC151A5D8V7 595 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 HMGB1P1B2RPK0 211 aaPredicted RBP11.23□□□□□ -0.61
COL12A1-203ENST00000416123 ENTPD3O75355 529 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 SERPIND1P05546 499 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 THPOP40225 353 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 FMO5P49326 533 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 KYAT1Q16773 422 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 C9orf131Q5VYM1 1079 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 TMEM117Q9H0C3 514 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 AMACRQ9UHK6 382 aa11.23□□□□□ -0.61
COL12A1-203ENST00000416123 CPT1AP50416 773 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 RBP5P82980 135 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 PDIA6Q15084 440 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 ENOSF1Q7L5Y1 443 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 TRAPPC3O43617 180 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 YIPF2Q9BWQ6 316 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 SLC4A7Q9Y6M7 1214 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 RPS6P62753 249 aaKnown RBP11.22□□□□□ -0.61
COL12A1-203ENST00000416123 PDCLQ13371 301 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 EPC2Q52LR7 807 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 GJB7Q6PEY0 223 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 DDIASQ8IXT1 998 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 PXDNLA1KZ92 1463 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 VGLL3A8MV65 326 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 DPYDQ12882 1025 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 NBPF9Q3BBW0 867 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 IZUMO3Q5VZ72 239 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 PDXDC1Q6P996 788 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 USP49Q70CQ1 688 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 ZBTB18Q99592 522 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 ERAP1Q9NZ08 941 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 VTNP04004 478 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 CYP2C9P11712 490 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 SREBF2Q12772 1141 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 COBLL1Q53SF7 1204 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 DCAF6Q58WW2 860 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 SLC7A14Q8TBB6 771 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 CAPN11Q9UMQ6 739 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 PEX19P40855 299 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 GOLGA7BQ2TAP0 167 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 MDH1BQ5I0G3 518 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 CATSPER3Q86XQ3 398 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 ANKRD13AQ8IZ07 590 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 RRAGCQ9HB90 399 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 L3MBTL1Q9Y468 752 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 ANKRD65E5RJM6 399 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 MMS22LQ6ZRQ5 1243 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 ACER1Q8TDN7 264 aa11.22□□□□□ -0.61
COL12A1-203ENST00000416123 A0A087WUV0 522 aaPredicted RBP11.21□□□□□ -0.61
COL12A1-203ENST00000416123 ALDH1A1P00352 501 aa11.21□□□□□ -0.61
COL12A1-203ENST00000416123 SLC8A1P32418 973 aa11.21□□□□□ -0.61
COL12A1-203ENST00000416123 EFHD1Q9BUP0 239 aa11.21□□□□□ -0.61
COL12A1-203ENST00000416123 MID2Q9UJV3 735 aa11.21□□□□□ -0.61
COL12A1-203ENST00000416123 CNTNAP4Q9C0A0 1308 aa11.21□□□□□ -0.61
COL12A1-203ENST00000416123 ETFBP38117 255 aa11.21□□□□□ -0.61
COL12A1-203ENST00000416123 NPEPPSP55786 919 aa11.21□□□□□ -0.61
COL12A1-203ENST00000416123 SCG3Q8WXD2 468 aaKnown RBP11.21□□□□□ -0.61
COL12A1-203ENST00000416123 SUN2Q9UH99 717 aa11.21□□□□□ -0.61
COL12A1-203ENST00000416123 CLCA2Q9UQC9 943 aa11.21□□□□□ -0.61
COL12A1-203ENST00000416123 PDXKO00764 312 aa11.21□□□□□ -0.61
COL12A1-203ENST00000416123 SLC37A4O43826 429 aa11.21□□□□□ -0.61
COL12A1-203ENST00000416123 HSD17B4P51659 736 aa11.21□□□□□ -0.61
COL12A1-203ENST00000416123 ANTXR2P58335 489 aa11.21□□□□□ -0.61
COL12A1-203ENST00000416123 ACAD11Q709F0 780 aa11.21□□□□□ -0.61
COL12A1-203ENST00000416123 EPAS1Q99814 870 aa11.21□□□□□ -0.61
COL12A1-203ENST00000416123 ABI2Q9NYB9 513 aaPredicted RBP11.21□□□□□ -0.61
COL12A1-203ENST00000416123 APOBEC2Q9Y235 224 aaKnown RBP11.21□□□□□ -0.61
COL12A1-203ENST00000416123 RASIP1Q5U651 963 aa11.21□□□□□ -0.61
COL12A1-203ENST00000416123 SERPINI1Q99574 410 aa11.21□□□□□ -0.61
COL12A1-203ENST00000416123 NYAP2Q9P242 653 aa11.21□□□□□ -0.61
COL12A1-203ENST00000416123 PITPNM2Q9BZ72 1349 aa11.21□□□□□ -0.61
COL12A1-203ENST00000416123 ARHGEF28Q8N1W1 1705 aaKnown RBP11.21□□□□□ -0.62
COL12A1-203ENST00000416123 KRT38O76015 456 aa11.21□□□□□ -0.62
COL12A1-203ENST00000416123 CYBBP04839 570 aa11.21□□□□□ -0.62
COL12A1-203ENST00000416123 ARHGDIAP52565 204 aa11.21□□□□□ -0.62
COL12A1-203ENST00000416123 PABPC5Q96DU9 382 aaKnown RBP11.21□□□□□ -0.62
COL12A1-203ENST00000416123 C7orf25Q9BPX7 421 aa11.21□□□□□ -0.62
COL12A1-203ENST00000416123 RRP15Q9Y3B9 282 aaKnown RBP11.21□□□□□ -0.62
COL12A1-203ENST00000416123 CTIFO43310 598 aaKnown RBP11.21□□□□□ -0.62
COL12A1-203ENST00000416123 ITGB3P05106 788 aa11.21□□□□□ -0.62
COL12A1-203ENST00000416123 KCNB1Q14721 858 aa11.21□□□□□ -0.62
COL12A1-203ENST00000416123 FBXO16Q8IX29 292 aaPredicted RBP11.21□□□□□ -0.62
COL12A1-203ENST00000416123 ACSF2Q96CM8 615 aaPredicted RBP11.21□□□□□ -0.62
COL12A1-203ENST00000416123 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.21□□□□□ -0.62
COL12A1-203ENST00000416123 TMEM247A6NEH6 219 aa11.21□□□□□ -0.62
COL12A1-203ENST00000416123 GRIN1Q05586 938 aa11.21□□□□□ -0.62
COL12A1-203ENST00000416123 HASPINQ8TF76 798 aa11.21□□□□□ -0.62
COL12A1-203ENST00000416123 RNPC3Q96LT9 517 aaKnown RBP11.21□□□□□ -0.62
COL12A1-203ENST00000416123 LIMA1Q9UHB6 759 aaKnown RBP11.21□□□□□ -0.62
COL12A1-203ENST00000416123 ITM2BQ9Y287 266 aa11.21□□□□□ -0.62
COL12A1-203ENST00000416123 YY1P25490 414 aa11.2□□□□□ -0.62
COL12A1-203ENST00000416123 UBE2Q2Q8WVN8 375 aa11.2□□□□□ -0.62
COL12A1-203ENST00000416123 ARL8AQ96BM9 186 aa11.2□□□□□ -0.62
COL12A1-203ENST00000416123 DRC3Q9H069 523 aa11.2□□□□□ -0.62
COL12A1-203ENST00000416123 ALDH8A1Q9H2A2 487 aaPredicted RBP11.2□□□□□ -0.62
COL12A1-203ENST00000416123 XAB2Q9HCS7 855 aaKnown RBP11.2□□□□□ -0.62
COL12A1-203ENST00000416123 FRMPD1Q5SYB0 1578 aa11.2□□□□□ -0.62
COL12A1-203ENST00000416123 GYS1P13807 737 aa11.2□□□□□ -0.62
COL12A1-203ENST00000416123 BRD2P25440 801 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms