RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 SRLQ86TD4 932 aa7.24□□□□□ -1.25
EPHA4-204ENST00000415749 SLC35G2Q8TBE7 412 aa7.24□□□□□ -1.25
EPHA4-204ENST00000415749 GRAPLQ8TC17 118 aaPredicted RBP7.24□□□□□ -1.25
EPHA4-204ENST00000415749 ALG3Q92685 438 aa7.24□□□□□ -1.25
EPHA4-204ENST00000415749 HERPUD2Q9BSE4 406 aa7.24□□□□□ -1.25
EPHA4-204ENST00000415749 BOCQ9BWV1 1114 aa7.24□□□□□ -1.25
EPHA4-204ENST00000415749 NSUN3Q9H649 340 aaKnown RBP7.24□□□□□ -1.25
EPHA4-204ENST00000415749 DCP1AQ9NPI6 582 aaPredicted RBP7.24□□□□□ -1.25
EPHA4-204ENST00000415749 NLRC4Q9NPP4 1024 aa7.24□□□□□ -1.25
EPHA4-204ENST00000415749 KLHL11Q9NVR0 708 aa7.24□□□□□ -1.25
EPHA4-204ENST00000415749 OXSMQ9NWU1 459 aa7.24□□□□□ -1.25
EPHA4-204ENST00000415749 MAP3K20Q9NYL2 800 aaKnown RBP7.24□□□□□ -1.25
EPHA4-204ENST00000415749 MIS18AQ9NYP9 233 aa7.24□□□□□ -1.25
EPHA4-204ENST00000415749 PTPN22Q9Y2R2 807 aa7.24□□□□□ -1.25
EPHA4-204ENST00000415749 CEP290O15078 2479 aa7.24□□□□□ -1.25
EPHA4-204ENST00000415749 KLHL33A6NCF5 533 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 LRRC10BA6NIK2 292 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 SLC27A2O14975 620 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 ECE2O60344 883 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 NBNO60934 754 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 HIP1RO75146 1068 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 H2AFYO75367 372 aaKnown RBP7.23□□□□□ -1.25
EPHA4-204ENST00000415749 VIPR1P32241 457 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 GJA4P35212 333 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 GJA9P57773 515 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 INHBEP58166 350 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 DCTN1Q14203 1278 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 ACAP2Q15057 778 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 RRP12Q5JTH9 1297 aaKnown RBP7.23□□□□□ -1.25
EPHA4-204ENST00000415749 B3GNT9Q6UX72 402 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 KCTD1Q719H9 257 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.23□□□□□ -1.25
EPHA4-204ENST00000415749 PTRH1Q86Y79 214 aaKnown RBP7.23□□□□□ -1.25
EPHA4-204ENST00000415749 AMOTL1Q8IY63 956 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 FAM186BQ8IYM0 893 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 DIRC2Q96SL1 478 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 SMURF1Q9HCE7 757 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 SIRT5Q9NXA8 310 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 POLLQ9UGP5 575 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 SWAP70Q9UH65 585 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 SCAF8Q9UPN6 1271 aaKnown RBP7.23□□□□□ -1.25
EPHA4-204ENST00000415749 DNM3Q9UQ16 869 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 DMTF1Q9Y222 760 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 INVSQ9Y283 1065 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 PPP2R3BQ9Y5P8 575 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 ATP23Q9Y6H3 246 aa7.23□□□□□ -1.25
EPHA4-204ENST00000415749 RTL9Q8NET4 1388 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 TCRBV5S2A0A599 114 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 TCRBV5S4A2TA0A5A2 114 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 GOLGA8AA7E2F4 631 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 GOLGA8BA8MQT2 603 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 PIP5K1CO60331 668 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 CLASP2O75122 1294 aaKnown RBP7.22□□□□□ -1.25
EPHA4-204ENST00000415749 ZRANB2O95218 330 aaKnown RBP eCLIP7.22□□□□□ -1.25
EPHA4-204ENST00000415749 AMY2AP04746 511 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 MYBP10242 640 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 AMY2BP19961 511 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 PRKAR2BP31323 418 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 NF2P35240 595 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 USP14P54578 494 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 EPHA5P54756 1037 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 AK2P54819 239 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 SRSF3P84103 164 aaKnown RBP7.22□□□□□ -1.25
EPHA4-204ENST00000415749 TUSC3Q13454 348 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 MLANAQ16655 118 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 CATIPQ7Z7H3 387 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 TTLL11Q8NHH1 800 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 ERO1AQ96HE7 468 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 YTHDC1Q96MU7 727 aaKnown RBP7.22□□□□□ -1.25
EPHA4-204ENST00000415749 SCLT1Q96NL6 688 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 EYA3Q99504 573 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 MYD88Q99836 296 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 NAA15Q9BXJ9 866 aaKnown RBP7.22□□□□□ -1.25
EPHA4-204ENST00000415749 NGRNQ9NPE2 291 aaKnown RBP7.22□□□□□ -1.25
EPHA4-204ENST00000415749 SIPA1L3O60292 1781 aaPredicted RBP7.22□□□□□ -1.25
EPHA4-204ENST00000415749 NUP98P52948 1817 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 CUL9Q8IWT3 2517 aa7.22□□□□□ -1.25
EPHA4-204ENST00000415749 TRIM75PA6NK02 468 aa7.21□□□□□ -1.26
EPHA4-204ENST00000415749 MAN2B1O00754 1011 aa7.21□□□□□ -1.26
EPHA4-204ENST00000415749 TGM5O43548 720 aa7.21□□□□□ -1.26
EPHA4-204ENST00000415749 HTATSF1O43719 755 aaKnown RBP7.21□□□□□ -1.26
EPHA4-204ENST00000415749 OFD1O75665 1012 aa7.21□□□□□ -1.26
EPHA4-204ENST00000415749 RHCEP18577 417 aa7.21□□□□□ -1.26
EPHA4-204ENST00000415749 GPSM2P81274 684 aa7.21□□□□□ -1.26
EPHA4-204ENST00000415749 IRF9Q00978 393 aa7.21□□□□□ -1.26
EPHA4-204ENST00000415749 RHDQ02161 417 aa7.21□□□□□ -1.26
EPHA4-204ENST00000415749 ZNF267Q14586 743 aaPredicted RBP7.21□□□□□ -1.26
EPHA4-204ENST00000415749 TARBP2Q15633 366 aaKnown RBP7.21□□□□□ -1.26
EPHA4-204ENST00000415749 MAPRE1Q15691 268 aaKnown RBP7.21□□□□□ -1.26
EPHA4-204ENST00000415749 SLC4A8Q2Y0W8 1093 aa7.21□□□□□ -1.26
EPHA4-204ENST00000415749 CC2D1BQ5T0F9 858 aaKnown RBP7.21□□□□□ -1.26
EPHA4-204ENST00000415749 CREB3L3Q68CJ9 461 aa7.21□□□□□ -1.26
EPHA4-204ENST00000415749 XRRA1Q6P2D8 792 aa7.21□□□□□ -1.26
EPHA4-204ENST00000415749 PRR23BQ6ZRT6 265 aa7.21□□□□□ -1.26
EPHA4-204ENST00000415749 CHST15Q7LFX5 561 aaPredicted RBP7.21□□□□□ -1.26
EPHA4-204ENST00000415749 ARMC9Q7Z3E5 817 aa7.21□□□□□ -1.26
EPHA4-204ENST00000415749 ZNF354CQ86Y25 554 aa7.21□□□□□ -1.26
EPHA4-204ENST00000415749 AGBL3Q8NEM8 1001 aa7.21□□□□□ -1.26
EPHA4-204ENST00000415749 CD99L2Q8TCZ2 262 aa7.21□□□□□ -1.26
EPHA4-204ENST00000415749 SH3RF2Q8TEC5 729 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms