RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 CBWD2Q8IUF1 395 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 CD302Q8IX05 232 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 GSPT2Q8IYD1 628 aaKnown RBP12.45□□□□□ -0.42
RFFL-205ENST00000415395 PARD3BQ8TEW8 1205 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 TRIB2Q92519 343 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 TLR10Q9BXR5 811 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 ARHGAP39Q9C0H5 1083 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 FZD8Q9H461 694 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 GDF3Q9NR23 364 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 PRMT7Q9NVM4 692 aaPredicted RBP12.45□□□□□ -0.42
RFFL-205ENST00000415395 AGO2Q9UKV8 859 aaKnown RBP12.45□□□□□ -0.42
RFFL-205ENST00000415395 GABRQQ9UN88 632 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 ACKR2O00590 384 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 ECM2O94769 699 aaPredicted RBP12.45□□□□□ -0.42
RFFL-205ENST00000415395 TRIM49P0CI25 452 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 TRIM49CP0CI26 452 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 SRGAP2CP0DJJ0 459 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 UCHL3P15374 230 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 SLC9A1P19634 815 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 GJA9P57773 515 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 IGBP1P78318 339 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 MFSD10Q14728 455 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 SLC18A3Q16572 532 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 FSCN1Q16658 493 aaKnown RBP12.45□□□□□ -0.42
RFFL-205ENST00000415395 CBWD6Q4V339 395 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 CBWD3Q5JTY5 395 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 CBWD5Q5RIA9 395 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 ZNF410Q86VK4 478 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 VPS36Q86VN1 386 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 ZNF784Q8NCA9 323 aaPredicted RBP12.45□□□□□ -0.42
RFFL-205ENST00000415395 BCAS4Q8TDM0 211 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 LMBR1Q8WVP7 490 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 RIN2Q8WYP3 895 aaPredicted RBP12.45□□□□□ -0.42
RFFL-205ENST00000415395 KAT2BQ92831 832 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 SAAL1Q96ER3 474 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 PBKQ96KB5 322 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 GDAP1L1Q96MZ0 367 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 ACO2Q99798 780 aaKnown RBP12.45□□□□□ -0.42
RFFL-205ENST00000415395 TARS2Q9BW92 718 aaKnown RBP12.45□□□□□ -0.42
RFFL-205ENST00000415395 UPF3AQ9H1J1 476 aaKnown RBP12.45□□□□□ -0.42
RFFL-205ENST00000415395 TMEM8AQ9HCN3 771 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 SIX2Q9NPC8 291 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 AIPL1Q9NZN9 384 aa12.45□□□□□ -0.42
RFFL-205ENST00000415395 DMGDHQ9UI17 866 aaKnown RBP12.45□□□□□ -0.42
RFFL-205ENST00000415395 MBLAC1A4D2B0 266 aaPredicted RBP12.44□□□□□ -0.42
RFFL-205ENST00000415395 GOLGA8IPA6NC78 632 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 GOLGA8JA6NMD2 632 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 HMGB1P1B2RPK0 211 aaPredicted RBP12.44□□□□□ -0.42
RFFL-205ENST00000415395 CLDN3O15551 220 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 HEXIM1O94992 359 aaKnown RBP12.44□□□□□ -0.42
RFFL-205ENST00000415395 SMIM10L2AP0DMW4 78 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 SMIM10L2BP0DMW5 78 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 PSEN2P49810 448 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 MXI1P50539 228 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 CLDN10P78369 228 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 PRKCZQ05513 592 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 GFPT1Q06210 699 aaPredicted RBP12.44□□□□□ -0.42
RFFL-205ENST00000415395 KLHL30Q0D2K2 578 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 CUL1Q13616 776 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 PSMD6Q15008 389 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 KIAA0753Q2KHM9 967 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 EPC2Q52LR7 807 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 C1orf220Q5T0J3 134 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 MARCH8Q5T0T0 291 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 KRT39Q6A163 491 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 FOXR1Q6PIV2 292 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 KDM7AQ6ZMT4 941 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 TSHZ1Q6ZSZ6 1077 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 NLRP4Q96MN2 994 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 MSTO1Q9BUK6 570 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 SPC25Q9HBM1 224 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 AKT3Q9Y243 479 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 COQ4Q9Y3A0 265 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 PCDHGC5Q9Y5F6 944 aa12.44□□□□□ -0.42
RFFL-205ENST00000415395 MYH10P35580 1976 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 SMIM35A0A1B0GVV1 85 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 SEPT4O43236 478 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 GNAT1P11488 350 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 PROZP22891 400 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 CCT5P48643 541 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 DLG4P78352 724 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 POU5F1Q01860 360 aaKnown RBP12.43□□□□□ -0.42
RFFL-205ENST00000415395 MBTD1Q05BQ5 628 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 MCL1Q07820 350 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 PPP3CAQ08209 521 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 PCBP1Q15365 356 aaKnown RBP eCLIP12.43□□□□□ -0.42
RFFL-205ENST00000415395 MEI1Q5TIA1 1274 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 HGSNATQ68CP4 663 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 LRIG3Q6UXM1 1119 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 ZSWIM2Q8NEG5 633 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 TRPV1Q8NER1 839 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 PLEKHO2Q8TD55 490 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 LRRC45Q96CN5 670 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 SPAG5Q96R06 1193 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 FAM213AQ9BRX8 229 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 INTS2Q9H0H0 1204 aaKnown RBP12.43□□□□□ -0.42
RFFL-205ENST00000415395 IFT122Q9HBG6 1241 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 NLRC4Q9NPP4 1024 aa12.43□□□□□ -0.42
RFFL-205ENST00000415395 RBM12Q9NTZ6 932 aaKnown RBP12.43□□□□□ -0.42
RFFL-205ENST00000415395 RNF186Q9NXI6 227 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms