RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 PRPHP41219 470 aa13.66□□□□□ -0.22
NCKIPSD-203ENST00000415281 GRM5P41594 1212 aa13.66□□□□□ -0.22
NCKIPSD-203ENST00000415281 PPP2R5AQ15172 486 aa13.66□□□□□ -0.22
NCKIPSD-203ENST00000415281 DCAF4L1Q3SXM0 396 aa13.66□□□□□ -0.22
NCKIPSD-203ENST00000415281 ARSHQ5FYA8 562 aa13.66□□□□□ -0.22
NCKIPSD-203ENST00000415281 HAUS3Q68CZ6 603 aa13.66□□□□□ -0.22
NCKIPSD-203ENST00000415281 PARM1Q6UWI2 310 aa13.66□□□□□ -0.22
NCKIPSD-203ENST00000415281 GPR152Q8TDT2 470 aa13.66□□□□□ -0.22
NCKIPSD-203ENST00000415281 DDX27Q96GQ7 796 aaKnown RBP13.66□□□□□ -0.22
NCKIPSD-203ENST00000415281 DNMT3BQ9UBC3 853 aaKnown RBP13.66□□□□□ -0.22
NCKIPSD-203ENST00000415281 MTRRQ9UBK8 725 aa13.66□□□□□ -0.22
NCKIPSD-203ENST00000415281 SMC3Q9UQE7 1217 aa13.66□□□□□ -0.22
NCKIPSD-203ENST00000415281 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.66□□□□□ -0.22
NCKIPSD-203ENST00000415281 DMXL1Q9Y485 3027 aa13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 SPDYE4A6NLX3 237 aa13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 GFRA3O60609 400 aa13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 C8AP07357 584 aa13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 GLULP15104 373 aa13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 OSTNP61366 133 aa13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 ATP2C1P98194 919 aaPredicted RBP13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 GNL2Q13823 731 aaKnown RBP13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 MRPL58Q14197 206 aaKnown RBP13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 SEZ6Q53EL9 994 aa13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 GET4Q7L5D6 327 aaPredicted RBP13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 CCDC105Q8IYK2 499 aa13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 C18orf25Q96B23 403 aaPredicted RBP13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 IFT74Q96LB3 600 aa13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 ADPGKQ9BRR6 497 aa13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 FOXD4L1Q9NU39 408 aa13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.65□□□□□ -0.228e-6■■□□□ 11.6
NCKIPSD-203ENST00000415281 DPP7Q9UHL4 492 aa13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 NOL7Q9UMY1 257 aaKnown RBP13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 DNM3Q9UQ16 869 aa13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 KIF3AQ9Y496 699 aa13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 BACE2Q9Y5Z0 518 aa13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 NUMBLQ9Y6R0 609 aa13.65□□□□□ -0.22
NCKIPSD-203ENST00000415281 DNAH14Q0VDD8 3507 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 NPHP3-ACAD11A0A0J9YXS1 232 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 PRR23AA6NEV1 266 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 SHISA7A6NL88 538 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 CCDC169A6NNP5 214 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 SLC16A4O15374 487 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 CCL16O15467 120 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 B3GAT3O94766 335 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 ABLIM3O94929 683 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 HNRNPA1P09651 372 aaKnown RBP eCLIP13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 SRFP11831 508 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 KCNE1P15382 129 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 FSHRP23945 695 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 GUCY2CP25092 1073 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 SLC12A3P55017 1021 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 GPC5P78333 572 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 CREMQ03060 361 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 SLC10A6Q3KNW5 377 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 AXDND1Q5T1B0 1012 aaPredicted RBP13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 SYT2Q8N9I0 419 aaPredicted RBP13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 DTWD2Q8NBA8 298 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 TMEM161BQ8NDZ6 487 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 FGF13Q92913 245 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 NXPE3Q969Y0 559 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 SNX27Q96L92 541 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 PIDD1Q9HB75 910 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 SLC2A4RGQ9NR83 387 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 CA14Q9ULX7 337 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 CDY1Q9Y6F8 540 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 FANCMQ8IYD8 2048 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 PHLPP2Q6ZVD8 1323 aa13.64□□□□□ -0.23
NCKIPSD-203ENST00000415281 K7ELQ4 463 aaPredicted RBP13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 LAD1O00515 517 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 LRRN2O75325 713 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 SEC24AO95486 1093 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 POU2F2P09086 479 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 HOXA9P31269 272 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 GRIN1Q05586 938 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 RAD51AP2Q09MP3 1159 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 CUL4AQ13619 759 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 SLC5A9Q2M3M2 681 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 SLC8B1Q6J4K2 584 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 DTHD1Q6ZMT9 781 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 FRMD5Q7Z6J6 570 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 SLC7A14Q8TBB6 771 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 STAMQ92783 540 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 PLIN2Q99541 437 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 PLA2G2FQ9BZM2 168 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 MFSD1Q9H3U5 465 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 KMT5AQ9NQR1 393 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 CNTN3Q9P232 1028 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 CDH7Q9ULB5 785 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 ANK1P16157 1881 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 SPTBN4Q9H254 2564 aa13.63□□□□□ -0.23
NCKIPSD-203ENST00000415281 COL4A2P08572 1712 aa13.62□□□□□ -0.23
NCKIPSD-203ENST00000415281 WDR27A2RRH5 827 aa13.62□□□□□ -0.23
NCKIPSD-203ENST00000415281 H3BQV1 296 aa13.62□□□□□ -0.23
NCKIPSD-203ENST00000415281 FAM189A1O60320 539 aa13.62□□□□□ -0.23
NCKIPSD-203ENST00000415281 VNN2O95498 520 aa13.62□□□□□ -0.23
NCKIPSD-203ENST00000415281 MAPTP10636 758 aaKnown RBP13.62□□□□□ -0.23
NCKIPSD-203ENST00000415281 MCF2P10911 925 aa13.62□□□□□ -0.23
NCKIPSD-203ENST00000415281 ROR1Q01973 937 aa13.62□□□□□ -0.23
NCKIPSD-203ENST00000415281 ELAVL2Q12926 359 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms