RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 ERMP1Q7Z2K6 904 aa21.24■□□□□ 0.99
UBXN4-202ENST00000415164 FAM170BA6NMN3 283 aa21.23■□□□□ 0.99
UBXN4-202ENST00000415164 K7ERI5 159 aa21.23■□□□□ 0.99
UBXN4-202ENST00000415164 LAMTOR5O43504 91 aa21.23■□□□□ 0.99
UBXN4-202ENST00000415164 LRG1P02750 347 aa21.23■□□□□ 0.99
UBXN4-202ENST00000415164 HARSP12081 509 aaKnown RBP21.23■□□□□ 0.99
UBXN4-202ENST00000415164 FGFR3P22607 806 aa21.23■□□□□ 0.99
UBXN4-202ENST00000415164 ELF1P32519 619 aa21.23■□□□□ 0.99
UBXN4-202ENST00000415164 NBR1Q14596 966 aa21.23■□□□□ 0.99
UBXN4-202ENST00000415164 ECM1Q16610 540 aa21.23■□□□□ 0.99
UBXN4-202ENST00000415164 UVSSAQ2YD98 709 aa21.23■□□□□ 0.99
UBXN4-202ENST00000415164 ZNF568Q3ZCX4 644 aa21.23■□□□□ 0.99
UBXN4-202ENST00000415164 ANKS3Q6ZW76 656 aa21.23■□□□□ 0.99
UBXN4-202ENST00000415164 NPAS3Q8IXF0 933 aa21.23■□□□□ 0.99
UBXN4-202ENST00000415164 CEP120Q8N960 986 aa21.23■□□□□ 0.99
UBXN4-202ENST00000415164 KIFAP3Q92845 792 aa21.23■□□□□ 0.99
UBXN4-202ENST00000415164 DDX27Q96GQ7 796 aaKnown RBP21.23■□□□□ 0.99
UBXN4-202ENST00000415164 UROC1Q96N76 676 aa21.23■□□□□ 0.99
UBXN4-202ENST00000415164 PPP1R10Q96QC0 940 aaKnown RBP21.23■□□□□ 0.99
UBXN4-202ENST00000415164 CCDC94Q9BW85 323 aaPredicted RBP21.23■□□□□ 0.99
UBXN4-202ENST00000415164 DDX19AQ9NUU7 478 aaKnown RBP21.23■□□□□ 0.99
UBXN4-202ENST00000415164 LRWD1Q9UFC0 647 aa21.23■□□□□ 0.99
UBXN4-202ENST00000415164 KIAA1024Q9UPX6 916 aa21.23■□□□□ 0.99
UBXN4-202ENST00000415164 MTF2Q9Y483 593 aaPredicted RBP21.23■□□□□ 0.99
UBXN4-202ENST00000415164 COL4A3Q01955 1670 aa21.22■□□□□ 0.99
UBXN4-202ENST00000415164 PRRG1O14668 218 aa21.22■□□□□ 0.99
UBXN4-202ENST00000415164 PEX3P56589 373 aa21.22■□□□□ 0.99
UBXN4-202ENST00000415164 PFKPQ01813 784 aa21.22■□□□□ 0.99
UBXN4-202ENST00000415164 TPRG1Q6ZUI0 275 aa21.22■□□□□ 0.99
UBXN4-202ENST00000415164 DCLK2Q8N568 766 aa21.22■□□□□ 0.99
UBXN4-202ENST00000415164 C3orf58Q8NDZ4 430 aa21.22■□□□□ 0.99
UBXN4-202ENST00000415164 SNX29Q8TEQ0 813 aa21.22■□□□□ 0.99
UBXN4-202ENST00000415164 NOL7Q9UMY1 257 aaKnown RBP21.22■□□□□ 0.99
UBXN4-202ENST00000415164 TMEM189-UBE2V1I3L0A0 370 aa21.21■□□□□ 0.99
UBXN4-202ENST00000415164 KINO60870 393 aaKnown RBP21.21■□□□□ 0.99
UBXN4-202ENST00000415164 RHOP08100 348 aa21.21■□□□□ 0.99
UBXN4-202ENST00000415164 RBM25P49756 843 aaKnown RBP21.21■□□□□ 0.99
UBXN4-202ENST00000415164 PRKCQQ04759 706 aa21.21■□□□□ 0.99
UBXN4-202ENST00000415164 CSTF1Q05048 431 aaKnown RBP21.21■□□□□ 0.99
UBXN4-202ENST00000415164 UPP1Q16831 310 aa21.21■□□□□ 0.99
UBXN4-202ENST00000415164 FAM184AQ8NB25 1140 aa21.21■□□□□ 0.99
UBXN4-202ENST00000415164 RMDN1Q96DB5 314 aa21.21■□□□□ 0.99
UBXN4-202ENST00000415164 TCHPQ9BT92 498 aa21.21■□□□□ 0.99
UBXN4-202ENST00000415164 TOPORSQ9NS56 1045 aaPredicted RBP21.21■□□□□ 0.99
UBXN4-202ENST00000415164 KCNH3Q9ULD8 1083 aa21.21■□□□□ 0.99
UBXN4-202ENST00000415164 TNFSF13BQ9Y275 285 aa21.21■□□□□ 0.99
UBXN4-202ENST00000415164 NUB1Q9Y5A7 615 aa21.21■□□□□ 0.99
UBXN4-202ENST00000415164 SMIM28A0A1B0GU29 152 aa21.2■□□□□ 0.98
UBXN4-202ENST00000415164 PODXLO00592 558 aa21.2■□□□□ 0.98
UBXN4-202ENST00000415164 CEBPBP17676 345 aa21.2■□□□□ 0.98
UBXN4-202ENST00000415164 ROR1Q01973 937 aa21.2■□□□□ 0.98
UBXN4-202ENST00000415164 SOX4Q06945 474 aaPredicted RBP21.2■□□□□ 0.98
UBXN4-202ENST00000415164 ORC2Q13416 577 aaPredicted RBP21.2■□□□□ 0.98
UBXN4-202ENST00000415164 SLC5A9Q2M3M2 681 aa21.2■□□□□ 0.98
UBXN4-202ENST00000415164 RUBCNQ92622 972 aa21.2■□□□□ 0.98
UBXN4-202ENST00000415164 CORO1BQ9BR76 489 aa21.2■□□□□ 0.98
UBXN4-202ENST00000415164 CDT1Q9H211 546 aa21.2■□□□□ 0.98
UBXN4-202ENST00000415164 FOXP1Q9H334 677 aaPredicted RBP21.2■□□□□ 0.98
UBXN4-202ENST00000415164 CYP4F11Q9HBI6 524 aa21.2■□□□□ 0.98
UBXN4-202ENST00000415164 LTB4R2Q9NPC1 389 aa21.2■□□□□ 0.98
UBXN4-202ENST00000415164 BACE2Q9Y5Z0 518 aa21.2■□□□□ 0.98
UBXN4-202ENST00000415164 GVINP1Q7Z2Y8 2422 aa21.19■□□□□ 0.98
UBXN4-202ENST00000415164 DOCK6Q96HP0 2047 aa21.19■□□□□ 0.98
UBXN4-202ENST00000415164 PTPN2P17706 415 aa21.19■□□□□ 0.98
UBXN4-202ENST00000415164 GRM5P41594 1212 aa21.19■□□□□ 0.98
UBXN4-202ENST00000415164 DMP1Q13316 513 aaPredicted RBP21.19■□□□□ 0.98
UBXN4-202ENST00000415164 ZRSR1Q15695 479 aaKnown RBP21.19■□□□□ 0.98
UBXN4-202ENST00000415164 VARS2Q5ST30 1063 aaKnown RBP21.19■□□□□ 0.98
UBXN4-202ENST00000415164 CD300LGQ6UXG3 332 aa21.19■□□□□ 0.98
UBXN4-202ENST00000415164 DGLUCYQ7Z3D6 616 aa21.19■□□□□ 0.98
UBXN4-202ENST00000415164 MRPL4Q9BYD3 311 aaKnown RBP21.19■□□□□ 0.98
UBXN4-202ENST00000415164 PLA2G2FQ9BZM2 168 aa21.19■□□□□ 0.98
UBXN4-202ENST00000415164 KMT5AQ9NQR1 393 aa21.19■□□□□ 0.98
UBXN4-202ENST00000415164 HEBP1Q9NRV9 189 aa21.19■□□□□ 0.98
UBXN4-202ENST00000415164 SLC38A7Q9NVC3 462 aa21.19■□□□□ 0.98
UBXN4-202ENST00000415164 PHLPP2Q6ZVD8 1323 aa21.19■□□□□ 0.98
UBXN4-202ENST00000415164 MYH15Q9Y2K3 1946 aa21.19■□□□□ 0.98
UBXN4-202ENST00000415164 E9PMD0 336 aa21.18■□□□□ 0.98
UBXN4-202ENST00000415164 HIP1RO75146 1068 aa21.18■□□□□ 0.98
UBXN4-202ENST00000415164 POU2F2P09086 479 aa21.18■□□□□ 0.98
UBXN4-202ENST00000415164 MUTP22033 750 aa21.18■□□□□ 0.98
UBXN4-202ENST00000415164 NPTX2P47972 431 aa21.18■□□□□ 0.98
UBXN4-202ENST00000415164 FXR2P51116 673 aaKnown RBP eCLIP21.18■□□□□ 0.98
UBXN4-202ENST00000415164 GRM2Q14416 872 aa21.18■□□□□ 0.98
UBXN4-202ENST00000415164 ZBTB41Q5SVQ8 909 aa21.18■□□□□ 0.98
UBXN4-202ENST00000415164 MAML2Q8IZL2 1156 aaPredicted RBP21.18■□□□□ 0.98
UBXN4-202ENST00000415164 ACO2Q99798 780 aaKnown RBP21.18■□□□□ 0.98
UBXN4-202ENST00000415164 TARS2Q9BW92 718 aaKnown RBP21.18■□□□□ 0.98
UBXN4-202ENST00000415164 NCDNQ9UBB6 729 aa21.18■□□□□ 0.98
UBXN4-202ENST00000415164 LIMCH1Q9UPQ0 1083 aa21.18■□□□□ 0.98
UBXN4-202ENST00000415164 VWA8A3KMH1 1905 aa21.17■□□□□ 0.98
UBXN4-202ENST00000415164 DCHS1Q96JQ0 3298 aa21.17■□□□□ 0.98
UBXN4-202ENST00000415164 WDR27A2RRH5 827 aa21.17■□□□□ 0.98
UBXN4-202ENST00000415164 TANGO2Q6ICL3 276 aa21.17■□□□□ 0.98
UBXN4-202ENST00000415164 ATRIPQ8WXE1 791 aa21.17■□□□□ 0.98
UBXN4-202ENST00000415164 ACAP3Q96P50 834 aa21.17■□□□□ 0.98
UBXN4-202ENST00000415164 DDX23Q9BUQ8 820 aaKnown RBP21.17■□□□□ 0.98
UBXN4-202ENST00000415164 RAB34Q9BZG1 259 aa21.17■□□□□ 0.98
UBXN4-202ENST00000415164 ANKFY1Q9P2R3 1169 aa21.17■□□□□ 0.98
UBXN4-202ENST00000415164 DNM3Q9UQ16 869 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms